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From "Chris Westin (JIRA)" <j...@apache.org>
Subject [jira] [Updated] (DRILL-3043) Select over corrupt parquet file must return a better message
Date Wed, 01 Jul 2015 19:19:04 GMT

     [ https://issues.apache.org/jira/browse/DRILL-3043?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel
]

Chris Westin updated DRILL-3043:
--------------------------------
    Fix Version/s: 1.2.0

> Select over corrupt parquet file must return a better message
> -------------------------------------------------------------
>
>                 Key: DRILL-3043
>                 URL: https://issues.apache.org/jira/browse/DRILL-3043
>             Project: Apache Drill
>          Issue Type: Bug
>          Components: Storage - Parquet
>    Affects Versions: 1.0.0
>         Environment: 21cc578b6b8c8f3ca1ebffd3dbb92e35d68bc726 | MD-272: MapRDB plugin
needs another update on 2015-05-08 
>            Reporter: Khurram Faraaz
>            Assignee: Steven Phillips
>            Priority: Minor
>             Fix For: 1.3.0
>
>
> Select over a corrupt parquet file does not return proper error message to user. Looks
like the correct message is getting lost.
> The below CTAS was used to create the original parquet file.
> {code}
> 0: jdbc:drill:schema=dfs.tmp> create table tblJsnToPrq_01 as select key from `oneMlnDblData.json`;
> +------------+---------------------------+
> |  Fragment  | Number of records written |
> +------------+---------------------------+
> | 0_0        | 999999                    |
> +------------+---------------------------+
> 1 row selected (2.381 seconds)
> 0: jdbc:drill:schema=dfs.tmp> select count(key) from  tblJsnToPrq_01;
> +------------+
> |   EXPR$0   |
> +------------+
> | 999999     |
> +------------+
> 1 row selected (0.232 seconds)
> {code}
> {code}
> 0: jdbc:drill:schema=dfs.tmp> select key from `corrupt_Parquet.parquet`;
> Error: SYSTEM ERROR: java.io.IOException: FAILED_TO_UNCOMPRESS(5)
> Fragment 0:0
> [Error Id: 48072728-574f-450f-8370-32dbbb534da6 on centos-01.qa.lab:31010] (state=,code=0)
> {code}
> The way the corrupt parquet file was created from the original parquet file. The first
and last 1000000 bytes were written to the new (corrupt) parquet file
> {code}
> [root@centos-01 mal_formed_parquet]# head -c 1000000 0_0_0.parquet >> corrupt_Parquet.parquet
> [root@centos-01 mal_formed_parquet]# tail -c 1000000 0_0_0.parquet >> corrupt_Parquet.parquet
> {code}
> Stack trace from drillbit.log
> {code}
> 2015-05-12 23:05:45,285 [2aad78b6-09c6-0e17-accf-ab279fab39dc:frag:0:0] ERROR o.a.d.c.e.DrillRuntimeException
- SYSTEM ERROR: java.io.IOException: FAILED_TO_UNCOMPRESS(5)
> Fragment 0:0
> [Error Id: 48072728-574f-450f-8370-32dbbb534da6 on centos-01.qa.lab:31010]
> org.apache.drill.common.exceptions.UserException: SYSTEM ERROR: java.io.IOException:
FAILED_TO_UNCOMPRESS(5)
> Fragment 0:0
> [Error Id: 48072728-574f-450f-8370-32dbbb534da6 on centos-01.qa.lab:31010]
>         at org.apache.drill.common.exceptions.UserException$Builder.build(UserException.java:495)
~[drill-common-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
>         at org.apache.drill.exec.work.fragment.FragmentExecutor.sendFinalState(FragmentExecutor.java:286)
[drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
>         at org.apache.drill.exec.work.fragment.FragmentExecutor.run(FragmentExecutor.java:254)
[drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
>         at org.apache.drill.common.SelfCleaningRunnable.run(SelfCleaningRunnable.java:38)
[drill-common-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
>         at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145)
[na:1.7.0_45]
>         at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615)
[na:1.7.0_45]
>         at java.lang.Thread.run(Thread.java:744) [na:1.7.0_45]
> Caused by: org.apache.drill.common.exceptions.DrillRuntimeException: Error in parquet
record reader.
> Message:
> Hadoop path: /tmp/corrupt_Parquet.parquet
> Total records read: 0
> Mock records read: 0
> Records to read: 32768
> Row group index: 0
> Records in row group: 999999
> Parquet Metadata: ParquetMetaData{FileMetaData{schema: message root {
>   optional double key;
> }
> , metadata: {}}, blocks: [BlockMetaData{999999, 8000439 [ColumnMetaData{SNAPPY [key]
DOUBLE  [PLAIN, BIT_PACKED, RLE], 4}]}]}
>         at org.apache.drill.exec.store.parquet.columnreaders.ParquetRecordReader.handleAndRaise(ParquetRecordReader.java:339)
~[drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
>         at org.apache.drill.exec.store.parquet.columnreaders.ParquetRecordReader.next(ParquetRecordReader.java:441)
~[drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
>         at org.apache.drill.exec.physical.impl.ScanBatch.next(ScanBatch.java:175) ~[drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
>         at org.apache.drill.exec.physical.impl.validate.IteratorValidatorBatchIterator.next(IteratorValidatorBatchIterator.java:118)
~[drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
>         at org.apache.drill.exec.physical.impl.BaseRootExec.next(BaseRootExec.java:83)
~[drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
>         at org.apache.drill.exec.physical.impl.ScreenCreator$ScreenRoot.innerNext(ScreenCreator.java:80)
~[drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
>         at org.apache.drill.exec.physical.impl.BaseRootExec.next(BaseRootExec.java:73)
~[drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
>         at org.apache.drill.exec.work.fragment.FragmentExecutor$1.run(FragmentExecutor.java:223)
~[drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
>         at org.apache.drill.exec.work.fragment.FragmentExecutor$1.run(FragmentExecutor.java:217)
~[drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
>         at java.security.AccessController.doPrivileged(Native Method) ~[na:1.7.0_45]
>         at javax.security.auth.Subject.doAs(Subject.java:415) ~[na:1.7.0_45]
>         at org.apache.hadoop.security.UserGroupInformation.doAs(UserGroupInformation.java:1469)
~[hadoop-common-2.4.1-mapr-1408.jar:na]
>         at org.apache.drill.exec.work.fragment.FragmentExecutor.run(FragmentExecutor.java:217)
[drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
>         ... 4 common frames omitted
> Caused by: java.io.IOException: FAILED_TO_UNCOMPRESS(5)
>         at org.xerial.snappy.SnappyNative.throw_error(SnappyNative.java:78) ~[na:na]
>         at org.xerial.snappy.SnappyNative.rawUncompress(Native Method) ~[na:na]
>         at org.xerial.snappy.Snappy.uncompress(Snappy.java:467) ~[snappy-java-1.0.5-M3.jar:na]
>         at parquet.hadoop.codec.SnappyDecompressor$SnappyDirectDecompressor.decompress(SnappyDecompressor.java:163)
~[parquet-hadoop-1.6.0rc3-drill-r0.3.jar:1.6.0rc3-drill-r0.3]
>         at org.apache.drill.exec.store.parquet.DirectCodecFactory$FullDirectDecompressor.decompress(DirectCodecFactory.java:239)
~[drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
>         at org.apache.drill.exec.store.parquet.columnreaders.PageReader.next(PageReader.java:230)
~[drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
>         at org.apache.drill.exec.store.parquet.columnreaders.NullableColumnReader.processPages(NullableColumnReader.java:76)
~[drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
>         at org.apache.drill.exec.store.parquet.columnreaders.ParquetRecordReader.readAllFixedFields(ParquetRecordReader.java:380)
~[drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
>         at org.apache.drill.exec.store.parquet.columnreaders.ParquetRecordReader.next(ParquetRecordReader.java:423)
~[drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
>         ... 15 common frames omitted
> 2015-05-12 23:05:45,287 [2aad78b6-09c6-0e17-accf-ab279fab39dc:frag:0:0] INFO  o.a.drill.exec.work.foreman.Foreman
- State change requested.  RUNNING --> FAILED
> org.apache.drill.common.exceptions.UserRemoteException: SYSTEM ERROR: java.io.IOException:
FAILED_TO_UNCOMPRESS(5)
> Fragment 0:0
> [Error Id: 48072728-574f-450f-8370-32dbbb534da6 on centos-01.qa.lab:31010]
>         at org.apache.drill.exec.work.foreman.QueryManager$1.statusUpdate(QueryManager.java:460)
[drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
>         at org.apache.drill.exec.work.foreman.QueryManager$RootStatusReporter.statusChange(QueryManager.java:440)
[drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
>         at org.apache.drill.exec.work.fragment.AbstractStatusReporter.fail(AbstractStatusReporter.java:90)
[drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
>         at org.apache.drill.exec.work.fragment.AbstractStatusReporter.fail(AbstractStatusReporter.java:86)
[drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
>         at org.apache.drill.exec.work.fragment.FragmentExecutor.sendFinalState(FragmentExecutor.java:290)
[drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
>         at org.apache.drill.exec.work.fragment.FragmentExecutor.run(FragmentExecutor.java:254)
[drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
>         at org.apache.drill.common.SelfCleaningRunnable.run(SelfCleaningRunnable.java:38)
[drill-common-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
>         at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145)
[na:1.7.0_45]
>         at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615)
[na:1.7.0_45]
>         at java.lang.Thread.run(Thread.java:744) [na:1.7.0_45]
> 2015-05-12 23:05:45,298 [2aad78b6-09c6-0e17-accf-ab279fab39dc:frag:0:0] INFO  o.a.d.e.w.fragment.FragmentExecutor
- 2aad78b6-09c6-0e17-accf-ab279fab39dc:0:0: State change requested from FAILED --> CANCELLATION_REQUESTED
for
> 2015-05-12 23:05:45,298 [2aad78b6-09c6-0e17-accf-ab279fab39dc:frag:0:0] WARN  o.a.d.e.w.fragment.FragmentExecutor
- Ignoring unexpected state transition FAILED => CANCELLATION_REQUESTED.
> 2015-05-12 23:05:45,298 [2aad78b6-09c6-0e17-accf-ab279fab39dc:frag:0:0] INFO  o.a.drill.exec.work.foreman.Foreman
- foreman cleaning up.
> 2015-05-12 23:05:45,305 [2aad78b6-09c6-0e17-accf-ab279fab39dc:frag:0:0] ERROR o.a.d.exec.work.foreman.QueryManager
- Failure while storing Query Profile
> java.lang.RuntimeException: java.io.IOException: java.lang.InterruptedException
>         at org.apache.drill.exec.store.sys.local.FilePStore.put(FilePStore.java:148)
~[drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
>         at org.apache.drill.exec.work.foreman.QueryManager.writeFinalProfile(QueryManager.java:286)
~[drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
>         at org.apache.drill.exec.work.foreman.Foreman$ForemanResult.close(Foreman.java:731)
[drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
>         at org.apache.drill.exec.work.foreman.Foreman$StateSwitch.processEvent(Foreman.java:826)
[drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
>         at org.apache.drill.exec.work.foreman.Foreman$StateSwitch.processEvent(Foreman.java:768)
[drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
>         at org.apache.drill.common.EventProcessor.sendEvent(EventProcessor.java:73) [drill-common-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
>         at org.apache.drill.exec.work.foreman.Foreman$StateSwitch.moveToState(Foreman.java:770)
[drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
>         at org.apache.drill.exec.work.foreman.Foreman.moveToState(Foreman.java:871) [drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
>         at org.apache.drill.exec.work.foreman.Foreman.access$2700(Foreman.java:107) [drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
>         at org.apache.drill.exec.work.foreman.Foreman$StateListener.moveToState(Foreman.java:1132)
[drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
>         at org.apache.drill.exec.work.foreman.QueryManager$1.statusUpdate(QueryManager.java:460)
[drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
>         at org.apache.drill.exec.work.foreman.QueryManager$RootStatusReporter.statusChange(QueryManager.java:440)
[drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
>         at org.apache.drill.exec.work.fragment.AbstractStatusReporter.fail(AbstractStatusReporter.java:90)
[drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
>         at org.apache.drill.exec.work.fragment.AbstractStatusReporter.fail(AbstractStatusReporter.java:86)
[drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
>         at org.apache.drill.exec.work.fragment.FragmentExecutor.sendFinalState(FragmentExecutor.java:290)
[drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
>         at org.apache.drill.exec.work.fragment.FragmentExecutor.run(FragmentExecutor.java:254)
[drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
>         at org.apache.drill.common.SelfCleaningRunnable.run(SelfCleaningRunnable.java:38)
[drill-common-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
>         at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145)
[na:1.7.0_45]
>         at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615)
[na:1.7.0_45]
>         at java.lang.Thread.run(Thread.java:744) [na:1.7.0_45]
> Caused by: java.io.IOException: java.lang.InterruptedException
>         at org.apache.hadoop.util.Shell.runCommand(Shell.java:508) ~[hadoop-common-2.4.1-mapr-1408.jar:na]
>         at org.apache.hadoop.util.Shell.run(Shell.java:418) ~[hadoop-common-2.4.1-mapr-1408.jar:na]
>         at org.apache.hadoop.util.Shell$ShellCommandExecutor.execute(Shell.java:650)
~[hadoop-common-2.4.1-mapr-1408.jar:na]
>         at org.apache.hadoop.util.Shell.execCommand(Shell.java:739) ~[hadoop-common-2.4.1-mapr-1408.jar:na]
>         at org.apache.hadoop.util.Shell.execCommand(Shell.java:722) ~[hadoop-common-2.4.1-mapr-1408.jar:na]
>         at org.apache.hadoop.fs.RawLocalFileSystem.setPermission(RawLocalFileSystem.java:676)
~[hadoop-common-2.4.1-mapr-1408.jar:na]
>         at org.apache.hadoop.fs.FilterFileSystem.setPermission(FilterFileSystem.java:467)
~[hadoop-common-2.4.1-mapr-1408.jar:na]
>         at org.apache.hadoop.fs.ChecksumFileSystem.create(ChecksumFileSystem.java:456)
~[hadoop-common-2.4.1-mapr-1408.jar:na]
>         at org.apache.hadoop.fs.ChecksumFileSystem.create(ChecksumFileSystem.java:424)
~[hadoop-common-2.4.1-mapr-1408.jar:na]
>         at org.apache.hadoop.fs.FileSystem.create(FileSystem.java:942) ~[hadoop-common-2.4.1-mapr-1408.jar:na]
>         at org.apache.hadoop.fs.FileSystem.create(FileSystem.java:923) ~[hadoop-common-2.4.1-mapr-1408.jar:na]
>         at org.apache.hadoop.fs.FileSystem.create(FileSystem.java:820) ~[hadoop-common-2.4.1-mapr-1408.jar:na]
>         at org.apache.hadoop.fs.FileSystem.create(FileSystem.java:809) ~[hadoop-common-2.4.1-mapr-1408.jar:na]
>         at org.apache.drill.exec.store.dfs.DrillFileSystem.create(DrillFileSystem.java:175)
~[drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
>         at org.apache.drill.exec.store.sys.local.FilePStore.put(FilePStore.java:145)
~[drill-java-exec-1.0.0-SNAPSHOT-rebuffed.jar:1.0.0-SNAPSHOT]
>         ... 19 common frames omitted
> {code}



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