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From F Méthot (JIRA) <j...@apache.org>
Subject [jira] [Created] (DRILL-5435) Using Limit causes Memory Leaked Error since 1.10
Date Thu, 13 Apr 2017 13:54:41 GMT
F Méthot created DRILL-5435:

             Summary: Using Limit causes Memory Leaked Error since 1.10
                 Key: DRILL-5435
                 URL: https://issues.apache.org/jira/browse/DRILL-5435
             Project: Apache Drill
          Issue Type: Bug
          Components: Storage - Parquet
    Affects Versions: 1.10.0
            Reporter: F Méthot

Here is the details I can provide:

  We migrated our production system from Drill 1.9 to 1.10 just 5 days ago. (220 nodes cluster)

Our log show there was some 900+ queries ran without problem in first 4 days.  (similar queries,
that never use the `limit` clause)

Yesterday we started doing simple adhoc select * ... limit 10 queries (like we often do, that
was our first use of limit with 1.10)
and we got a `Memory was leaked` exception below.

Also, once we get the error, Most of all subsequent user queries fails with Channel Close
Exception. We need to restart Drill to bring it back to normal.

A day later, I used a similar select * limit 10 queries, and the same thing happen, had to
restart Drill.

In the exception, it was refering to a file (1_0_0.parquet)
I moved that file to smaller test cluster (12 nodes) and got the error on the first attempt.
but I am no longer able to reproduce the issue on that file. Between the 12 and 220 nodes
cluster, a different Column name and Row Group Start was listed in the error.
The parquet file was generated by Drill 1.10.

I tried the same file with a local drill-embedded 1.9 and 1.10 and had no issue.

Here is the error (manually typed), if you think of anything obvious, let us know.

AsyncPageReader - User Error Occured: Exception Occurred while reading from disk (can not
read class o.a.parquet.format.PageHeader: java.io.IOException: input stream is closed.)

Column: StringColXYZ
Row Group Start: 115215476

[Error Id: ....]
  at UserException.java:544)
  at o.a.d.exec.store.parquet.columnreaders.AsyncPageReader.handleAndThrowException(AsynvPageReader.java:199)
  at o.a.d.exec.store.parquet.columnreaders.AsyncPageReader.access(AsynvPageReader.java:81)
  at o.a.d.exec.store.parquet.columnreaders.AsyncPageReader.AsyncPageReaderTask.call(AsyncPageReader.java:483)
  at o.a.d.exec.store.parquet.columnreaders.AsyncPageReader.AsyncPageReaderTask.call(AsyncPageReader.java:392)
  at o.a.d.exec.store.parquet.columnreaders.AsyncPageReader.AsyncPageReaderTask.call(AsyncPageReader.java:392)
Caused by: java.io.IOException: can not read class org.apache.parquet.format.PageHeader: java.io.IOException:
Input Stream is closed.
   at o.a.parquet.format.Util.read(Util.java:216)
   at o.a.parquet.format.Util.readPageHeader(Util.java:65)
   at o.a.drill.exec.store.parquet.columnreaders.AsyncPageReader(AsyncPageReaderTask:430)
Caused by: parquet.org.apache.thrift.transport.TTransportException: Input stream is closed
   at ...read(TIOStreamTransport.java:129)
   at ....TTransport.readAll(TTransport.java:84)
   at ....TCompactProtocol.readByte(TCompactProtocol.java:474)
   at ....TCompactProtocol.readFieldBegin(TCompactProtocol.java:481)
   at ....InterningProtocol.readFieldBegin(InterningProtocol.java:158)
   at ....o.a.parquet.format.PageHeader.read(PageHeader.java:828)
   at ....o.a.parquet.format.Util.read(Util.java:213)

Fragment 0:0
[Error id: ...]
o.a.drill.common.exception.UserException: SYSTEM ERROR: IllegalStateException: Memory was
leaked by query. Memory leaked: (524288)
Allocator(op:0:0:4:ParquetRowGroupScan) 1000000/524288/39919616/10000000000
  at o.a.d.common.exceptions.UserException (UserException.java:544)
  at o.a.d.exec.work.fragment.FragmentExecutor.sendFinalState(FragmentExecutor.java:293)
  at o.a.d.exec.work.fragment.FragmentExecutor.cleanup( FragmentExecutor.java:160)
  at o.a.d.exec.work.fragment.FragmentExecutor.run(FragmentExecutor.java:262)
Caused by: IllegalStateException: Memory was leaked by query. Memory leaked: (524288)
  at o.a.d.exec.memory.BaseAllocator.close(BaseAllocator.java:502)
  at o.a.d.exec.ops.OperatorContextImpl(OperatorContextImpl.java:149)
  at o.a.d.exec.ops.FragmentContext.suppressingClose(FragmentContext.java:422)
  at o.a.d.exec.ops.FragmentContext.close(FragmentContext.java:411)
  at o.a.d.exec.work.fragment.FragmentExecutor.closeOutResources(FragmentExecutor.java:318)
  at o.a.d.exec.work.fragment.FragmentExecutor.cleanup(FragmentExecutor.java:155)

This fixed the problem:
alter <session|system> set `store.parquet.reader.pagereader.async`=false;

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