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From "Mattias (JIRA)" <j...@apache.org>
Subject [jira] [Created] (DERBY-6818) java.lang.OutOfMemoryError
Date Wed, 10 Jun 2015 07:34:01 GMT
Mattias created DERBY-6818:
------------------------------

             Summary: java.lang.OutOfMemoryError
                 Key: DERBY-6818
                 URL: https://issues.apache.org/jira/browse/DERBY-6818
             Project: Derby
          Issue Type: Bug
          Components: JDBC
    Affects Versions: 10.11.1.1
         Environment: Using Derby disk database with JBoss eap 6.4.
            Reporter: Mattias


We got a 'java.lang.OutOfMemoryError: Java heap space' when using a Derby disk database with
the following schema.

{code}
CREATE TABLE TEST (   ID BIGINT NOT NULL
,   NEXT _ID BIGINT
,   PREV_ ID BIGINT
,   TEST_XML XML);

ALTER TABLE TABLE
        ADD PRIMARY KEY
                (ID);
{code}

I opened the heap dump with Eclipse Memory Analyzer and found that tree instances of org.apache.derby.impl.store.access.sort.MergeInserter
occupies 290 MB of memory (that is 66 % of the total heap)  

The problem seems to be that MergeInserter holds a sort buffer that contains complete rows
and the TEST_XML is about 160 kB each. MergeInserter has an advanced algorithm to calculate
the allowed size of the buffer, but is it necessary store the complete row in the buffer,
i.e. the non-indexed values (TEST_XML is this case)?

Is there some property I can set to limit the buffer size or is it possible to rewrite the
SQL schema someway to exclude the XML type from the buffer?

Following is the dominator tree from Eclipse Memory Analyzer:
{code}
org.apache.derby.impl.store.access.sort.MergeInserter @ 0xe3f72e20                       
                                                                                         
                                                                                         
                                   |           72 |   127 533 080 |     30,76%

|- org.apache.derby.impl.store.access.sort.SortBuffer @ 0xe3f73018                       
                                                                                         
                                                                                         
                                   |           48 |   127 532 792 |     30,76%

|  |- org.apache.derby.impl.store.access.sort.Node @ 0xe3fed5e0                          
                                                                                         
                                                                                         
                                   |           40 |       164 384 |      0,04%

|  |  '- org.apache.derby.iapi.types.DataValueDescriptor[4] @ 0xee3da280                 
                                                                                         
                                                                                         
                                   |           32 |       164 344 |      0,04%

|  |     |- org.apache.derby.iapi.types.SQLClob @ 0xee3da2a0                             
                                                                                         
                                                                                         
                                   |           56 |       164 240 |      0,04%

|  |     |  |- java.lang.String @ 0xee3da2d8  < ?xml version="1.0"?...|           24 |
      164 160 |      0,04%

|  |     |  |- char[1][] @ 0xee3da2f0                                                    
                                                                                         
                                                                                         
                                   |           24 |            24 |      0,00%

|  |     |  '- Total: 2 entries                                                          
                                                                                         
                                                                                         
                                   |              |               |          

|  |     |- org.apache.derby.iapi.types.SQLLongint @ 0xee3da308                          
                                                                                         
                                                                                         
                                   |           24 |            24 |      0,00%

|  |     |- org.apache.derby.iapi.types.SQLLongint @ 0xee3da320                          
                                                                                         
                                                                                         
                                   |           24 |            24 |      0,00%

|  |     |- org.apache.derby.iapi.types.SQLLongint @ 0xee3da338                          
                                                                                         
                                                                                         
                                   |           24 |            24 |      0,00%

|  |     '- Total: 4 entries                                                             
                                                                                         
                                                                                         
                                   |              |               |          

|  |- org.apache.derby.impl.store.access.sort.Node @ 0xe3fed608                          
                                                                                         
                                                                                         
                                   |           40 |       164 384 |      0,04%

|  |- org.apache.derby.impl.store.access.sort.Node @ 0xe3fed630                          
                                                                                         
                                                                                         
                                   |           40 |       164 384 |      0,04%

|  |- org.apache.derby.impl.store.access.sort.Node @ 0xe3fed658                          
                                                                                         
                                                                                         
                                   |           40 |       164 384 |      0,04%

|  |- org.apache.derby.impl.store.access.sort.Node @ 0xe3fed680                          
                                                                                         
                                                                                         
                                   |           40 |       164 384 |      0,04%

|  |- org.apache.derby.impl.store.access.sort.Node @ 0xe3fed6a8                          
                                                                                         
                                                                                         
                                   |           40 |       164 384 |      0,04%

|  |- org.apache.derby.impl.store.access.sort.Node @ 0xe3fed6d0                          
                                                                                         
                                                                                         
                                   |           40 |       164 384 |      0,04%

|  |- org.apache.derby.impl.store.access.sort.Node @ 0xe3fed6f8                          
                                                                                         
                                                                                         
                                   |           40 |       164 384 |      0,04%

|  |- org.apache.derby.impl.store.access.sort.Node @ 0xe3fed720                          
                                                                                         
                                                                                         
                                   |           40 |       164 384 |      0,04%

|  |- org.apache.derby.impl.store.access.sort.Node @ 0xe3fedd50                          
                                                                                         
                                                                                         
                                   |           40 |       164 384 |      0,04%

|  |- org.apache.derby.impl.store.access.sort.Node @ 0xe3fedd78                          
                                                                                         
                                                                                         
                                   |           40 |       164 384 |      0,04%

|  |- org.apache.derby.impl.store.access.sort.Node @ 0xe3fedda0                          
                                                                                         
                                                                                         
                                   |           40 |       164 384 |      0,04%

|  |- org.apache.derby.impl.store.access.sort.Node @ 0xe3feddc8                          
                                                                                         
                                                                                         
                                   |           40 |       164 384 |      0,04%

|  |- org.apache.derby.impl.store.access.sort.Node @ 0xe3fedff8                          
                                                                                         
                                                                                         
                                   |           40 |       164 384 |      0,04%

|  |- org.apache.derby.impl.store.access.sort.Node @ 0xe3fef5c8                          
                                                                                         
                                                                                         
                                   |           40 |       164 384 |      0,04%

|  |- org.apache.derby.impl.store.access.sort.Node @ 0xe3fef5f0                          
                                                                                         
                                                                                         
                                   |           40 |       164 384 |      0,04%

|  |- org.apache.derby.impl.store.access.sort.Node @ 0xe3fef618                          
                                                                                         
                                                                                         
                                   |           40 |       164 384 |      0,04%

|  |- org.apache.derby.impl.store.access.sort.Node @ 0xe3ff01f8                          
                                                                                         
                                                                                         
                                   |           40 |       164 384 |      0,04%

|  |- org.apache.derby.impl.store.access.sort.Node @ 0xe3ff04c8                          
                                                                                         
                                                                                         
                                   |           40 |       164 384 |      0,04%

|  |- org.apache.derby.impl.store.access.sort.Node @ 0xe3ff0608                          
                                                                                         
                                                                                         
                                   |           40 |       164 384 |      0,04%

|  |- org.apache.derby.impl.store.access.sort.Node @ 0xe3ff0630                          
                                                                                         
                                                                                         
                                   |           40 |       164 384 |      0,04%

|  |- org.apache.derby.impl.store.access.sort.Node @ 0xe3ff0658                          
                                                                                         
                                                                                         
                                   |           40 |       164 384 |      0,04%

|  |- org.apache.derby.impl.store.access.sort.Node @ 0xe3ff0680                          
                                                                                         
                                                                                         
                                   |           40 |       164 384 |      0,04%

|  |- org.apache.derby.impl.store.access.sort.Node @ 0xe3ff06a8                          
                                                                                         
                                                                                         
                                   |           40 |       164 384 |      0,04%

|  |- org.apache.derby.impl.store.access.sort.Node @ 0xe3ff06d0                          
                                                                                         
                                                                                         
                                   |           40 |       164 384 |      0,04%

|  '- Total: 25 of 780 entries; 755
{code}

This is a snippet of my jboss standalone.xml:

{code:xml}
        <datasources>
                <xa-datasource jndi-name="java:/jdbc/MYDB" pool-name="mydb_Pool" enabled="true">
                    <xa-datasource-property name="DatabaseName">
                        mydb
                    </xa-datasource-property>
                    <xa-datasource-property name="CreateDatabase">
                        create
                    </xa-datasource-property>
                    <driver>derby-embedded</driver>
                    <xa-pool>
                        <is-same-rm-override>false</is-same-rm-override>
                    </xa-pool>
                    <security>
                        <user-name>sa</user-name>
                        <password>admin</password>
                    </security>
                </xa-datasource>
       
{code}



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