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From "Karl Wright (JIRA)" <j...@apache.org>
Subject [jira] [Commented] (DERBY-5169) Derby intermittently fails with an internal error
Date Fri, 01 Apr 2011 07:16:05 GMT

    [ https://issues.apache.org/jira/browse/DERBY-5169?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=13014454#comment-13014454
] 

Karl Wright commented on DERBY-5169:
------------------------------------

Thanks for the advice; I'll rebuild and give it a try.


> Derby intermittently fails with an internal error
> -------------------------------------------------
>
>                 Key: DERBY-5169
>                 URL: https://issues.apache.org/jira/browse/DERBY-5169
>             Project: Derby
>          Issue Type: Bug
>         Environment: Derby 10.7.1.1 + patch for cycle detection problem
>            Reporter: Karl Wright
>
> During the running of ManifoldCF tests, the JDBC error "No current connection" is thrown.
 Looking at derby.log for the time when this happens, the following can be found:
> Thu Mar 31 13:26:28 EDT 2011 Thread[Thread-458,5,main] (XID = 636), (SESSIONID \
> = 11), (DATABASE = /data/mcf/trunk/test-output/filesystem/dbname), (DRDAID = nu\
> ll), Failed Statement is: SELECT id,status,checktime FROM jobqueue WHERE jobid=\
> ? AND dochash=? FOR UPDATE
> org.apache.derby.shared.common.sanity.AssertFailure: ASSERT FAILED Internal Err\
> or-- statistics not found in selectivityForConglomerate.
>  cd = ConglomerateDescriptor: conglomerateNumber = 1985 name = I1301592382768 u\
> uid = bfd00180-012f-0cf3-92ab-00000674d0a0 indexable = true
> numKeys = 2
>         at org.apache.derby.shared.common.sanity.SanityManager.THROWASSERT(Sani\
> tyManager.java:162)
>         at org.apache.derby.shared.common.sanity.SanityManager.THROWASSERT(Sani\
> tyManager.java:147)
>         at org.apache.derby.iapi.sql.dictionary.TableDescriptor.selectivityForC\
> onglomerate(TableDescriptor.java:1345)
>         at org.apache.derby.impl.sql.compile.PredicateList.selectivity(Predicat\
> eList.java:3905)
>         at org.apache.derby.impl.sql.compile.FromBaseTable.estimateCost(FromBas\
> eTable.java:1279)
>         at org.apache.derby.impl.sql.compile.OptimizerImpl.estimateTotalCost(Op\
> timizerImpl.java:2626)
>         at org.apache.derby.impl.sql.compile.OptimizerImpl.costBasedCostOptimiz\
> able(OptimizerImpl.java:2172)
>         at org.apache.derby.impl.sql.compile.OptimizerImpl.costOptimizable(Opti\
> mizerImpl.java:1985)
>         at org.apache.derby.impl.sql.compile.FromBaseTable.optimizeIt(FromBaseT\
> able.java:521)
>         at org.apache.derby.impl.sql.compile.ProjectRestrictNode.optimizeIt(Pro\
> jectRestrictNode.java:316)
>         at org.apache.derby.impl.sql.compile.OptimizerImpl.costPermutation(Opti\
> mizerImpl.java:1939)
>         at org.apache.derby.impl.sql.compile.SelectNode.optimize(SelectNode.jav\
> a:1916)
>         at org.apache.derby.impl.sql.compile.DMLStatementNode.optimizeStatement\
> (DMLStatementNode.java:315)
>         at org.apache.derby.impl.sql.compile.CursorNode.optimizeStatement(Curso\
> rNode.java:558)
>         at org.apache.derby.impl.sql.GenericStatement.prepMinion(GenericStateme\
> nt.java:381)
>         at org.apache.derby.impl.sql.GenericStatement.prepare(GenericStatement.\
> java:90)
>         at org.apache.derby.impl.sql.conn.GenericLanguageConnectionContext.prep\
> areInternalStatement(GenericLanguageConnectionContext.java:1101)
>         at org.apache.derby.impl.jdbc.EmbedPreparedStatement.<init>(EmbedPrepar\
> edStatement.java:131)
>         at org.apache.derby.impl.jdbc.EmbedPreparedStatement20.<init>(EmbedPrep\
> aredStatement20.java:82)
>         at org.apache.derby.impl.jdbc.EmbedPreparedStatement30.<init>(EmbedPrep\
> aredStatement30.java:63)
>         at org.apache.derby.impl.jdbc.EmbedPreparedStatement40.<init>(EmbedPrep\
> aredStatement40.java:40)
>         at org.apache.derby.jdbc.Driver40.newEmbedPreparedStatement(Driver40.ja\
> va:105)
>         at org.apache.derby.impl.jdbc.EmbedConnection.prepareStatement(EmbedCon\
> nection.java:1613)
>         at org.apache.derby.impl.jdbc.EmbedConnection.prepareStatement(EmbedCon\
> nection.java:1441)
>         at com.bitmechanic.sql.PooledConnection.prepareStatement(PooledConnecti\
> on.java:352)
>         at org.apache.manifoldcf.core.database.Database.execute(Database.java:5\
> 86)
>         at org.apache.manifoldcf.core.database.Database$ExecuteQueryThread.run(\
> Database.java:421)
> ---------------
> Stack traces for all live threads:
> Thread name=Expiration thread '1' id=243 priority=5 state=WAITING isdaemon=true
>         java.lang.Object.wait(Native Method)
>         java.lang.Object.wait(Object.java:485)
>         org.apache.manifoldcf.crawler.system.DocumentCleanupQueue.getDocuments(\
> DocumentCleanupQueue.java:100)
>         org.apache.manifoldcf.crawler.system.ExpireThread.run(ExpireThread.java\
> :89)
> Thread name=Document delete thread '0' id=253 priority=5 state=WAITING isdaemon\
> =true
>         java.lang.Object.wait(Native Method)
>         java.lang.Object.wait(Object.java:485)
>         org.apache.manifoldcf.crawler.system.DocumentDeleteQueue.getDocuments(D\
> ocumentDeleteQueue.java:100)
>         org.apache.manifoldcf.crawler.system.DocumentDeleteThread.run(DocumentD\
> eleteThread.java:89)
> Thread name=Worker thread '33' id=175 priority=5 state=WAITING isdaemon=true
>         java.lang.Object.wait(Native Method)
>         java.lang.Object.wait(Object.java:485)
>         org.apache.manifoldcf.crawler.system.DocumentQueue.getDocument(Document\
> Queue.java:110)
> ...
> Thread name=Thread-460 id=469 priority=5 state=WAITING isdaemon=true
>         java.lang.Object.wait(Native Method)
>         java.lang.Object.wait(Object.java:485)
>         org.apache.derby.impl.sql.GenericStatement.prepMinion(GenericStatement.\
> java:197)
>         org.apache.derby.impl.sql.GenericStatement.prepare(GenericStatement.jav\
> a:90)
>         org.apache.derby.impl.sql.conn.GenericLanguageConnectionContext.prepare\
> InternalStatement(GenericLanguageConnectionContext.java:1101)
>         org.apache.derby.impl.jdbc.EmbedPreparedStatement.<init>(EmbedPreparedS\
> tatement.java:131)
>         org.apache.derby.impl.jdbc.EmbedPreparedStatement20.<init>(EmbedPrepare\
> dStatement20.java:82)
>         org.apache.derby.impl.jdbc.EmbedPreparedStatement30.<init>(EmbedPrepare\
> dStatement30.java:63)
>         org.apache.derby.impl.jdbc.EmbedPreparedStatement40.<init>(EmbedPrepare\
> dStatement40.java:40)
>         org.apache.derby.jdbc.Driver40.newEmbedPreparedStatement(Driver40.java:\
> 105)
>         org.apache.derby.impl.jdbc.EmbedConnection.prepareStatement(EmbedConnec\
> tion.java:1613)
>         org.apache.derby.impl.jdbc.EmbedConnection.prepareStatement(EmbedConnec\
> tion.java:1441)
> ...
> Thread name=Thread-459 id=468 priority=5 state=RUNNABLE isdaemon=true
>         java.lang.Object.hashCode(Native Method)
>         org.apache.derby.impl.services.locks.Lock.hashCode(Lock.java:145)
>         java.util.HashMap.get(HashMap.java:300)
>         org.apache.derby.impl.services.locks.LockSpace.isLockHeld(LockSpace.jav\
> a:322)
>         org.apache.derby.impl.services.locks.AbstractPool.isLockHeld(AbstractPo\
> ol.java:322)
>         org.apache.derby.impl.store.raw.xact.RowLocking3.lockContainer(RowLocki\
> ng3.java:144)
>         org.apache.derby.impl.store.raw.data.BaseContainerHandle.useContainer(B\
> aseContainerHandle.java:809)
>         org.apache.derby.impl.store.raw.data.BaseDataFileFactory.openContainer(\
> BaseDataFileFactory.java:752)
>         org.apache.derby.impl.store.raw.data.BaseDataFileFactory.openContainer(\
> BaseDataFileFactory.java:568)
>         org.apache.derby.impl.store.raw.xact.Xact.openContainer(Xact.java:1313)
>         org.apache.derby.impl.store.access.conglomerate.OpenConglomerate.init(O\
> penConglomerate.java:909)
>         org.apache.derby.impl.store.access.heap.Heap.open(Heap.java:683)
>         org.apache.derby.impl.store.access.RAMTransaction.openConglomerate(RAMT\
> ransaction.java:476)
>         org.apache.derby.impl.store.access.RAMTransaction.openConglomerate(RAMT\
> ransaction.java:1308)
>         org.apache.derby.impl.sql.catalog.DataDictionaryImpl.getDescriptorViaIn\
> dexMinion(DataDictionaryImpl.java:8567)
>         org.apache.derby.impl.sql.catalog.DataDictionaryImpl.getDescriptorViaIn\
> dex(DataDictionaryImpl.java:8525)
>         org.apache.derby.impl.sql.catalog.DataDictionaryImpl.locateSchemaRow(Da\
> taDictionaryImpl.java:1649)
>         org.apache.derby.impl.sql.catalog.DataDictionaryImpl.getSchemaDescripto\
> r(DataDictionaryImpl.java:1516)
>         org.apache.derby.impl.sql.compile.QueryTreeNode.getSchemaDescriptor(Que\
> ryTreeNode.java:1437)
>         org.apache.derby.impl.sql.compile.QueryTreeNode.getSchemaDescriptor(Que\
> ryTreeNode.java:1370)
>         org.apache.derby.impl.sql.compile.DMLModStatementNode.verifyTargetTable\
> (DMLModStatementNode.java:201)
>         org.apache.derby.impl.sql.compile.DeleteNode.bindStatement(DeleteNode.j\
> ava:221)
>         org.apache.derby.impl.sql.GenericStatement.prepMinion(GenericStatement.\
> java:324)
>         org.apache.derby.impl.sql.GenericStatement.prepare(GenericStatement.jav\
> a:90)
>         org.apache.derby.impl.sql.conn.GenericLanguageConnectionContext.prepare\
> InternalStatement(GenericLanguageConnectionContext.java:1101)
>         org.apache.derby.impl.jdbc.EmbedPreparedStatement.<init>(EmbedPreparedS\
> tatement.java:131)
>         org.apache.derby.impl.jdbc.EmbedPreparedStatement20.<init>(EmbedPrepare\
> dStatement20.java:82)
>         org.apache.derby.impl.jdbc.EmbedPreparedStatement30.<init>(EmbedPrepare\
> dStatement30.java:63)
>         org.apache.derby.impl.jdbc.EmbedPreparedStatement40.<init>(EmbedPrepare\
> dStatement40.java:40)
>         org.apache.derby.jdbc.Driver40.newEmbedPreparedStatement(Driver40.java:\
> 105)
>         org.apache.derby.impl.jdbc.EmbedConnection.prepareStatement(EmbedConnec\
> tion.java:1613)
>         org.apache.derby.impl.jdbc.EmbedConnection.prepareStatement(EmbedConnec\
> tion.java:1441)
> ...
> Thread name=Thread-458 id=467 priority=5 state=RUNNABLE isdaemon=true
>         java.lang.Thread.dumpThreads(Native Method)
>         java.lang.Thread.getAllStackTraces(Thread.java:1530)
>         org.apache.derby.shared.common.sanity.ThreadDump.getStackDumpString(Thr\
> eadDump.java:34)
>         sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
>         sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.ja\
> va:39)
>         sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccesso\
> rImpl.java:25)
>         java.lang.reflect.Method.invoke(Method.java:597)
>         org.apache.derby.shared.common.sanity.AssertFailure$1.run(AssertFailure\
> .java:165)
>         java.security.AccessController.doPrivileged(Native Method)
>         org.apache.derby.shared.common.sanity.AssertFailure.dumpThreads(AssertF\
> ailure.java:159)
>         org.apache.derby.shared.common.sanity.AssertFailure.<init>(AssertFailur\
> e.java:72)
>         org.apache.derby.shared.common.sanity.SanityManager.THROWASSERT(SanityM\
> anager.java:162)
>         org.apache.derby.shared.common.sanity.SanityManager.THROWASSERT(SanityM\
> anager.java:147)
>         org.apache.derby.iapi.sql.dictionary.TableDescriptor.selectivityForCong\
> lomerate(TableDescriptor.java:1345)
>         org.apache.derby.impl.sql.compile.PredicateList.selectivity(PredicateLi\
> st.java:3905)
>         org.apache.derby.impl.sql.compile.FromBaseTable.estimateCost(FromBaseTa\
> ble.java:1279)
>         org.apache.derby.impl.sql.compile.OptimizerImpl.estimateTotalCost(Optim\
> izerImpl.java:2626)
>         org.apache.derby.impl.sql.compile.OptimizerImpl.costBasedCostOptimizabl\
> e(OptimizerImpl.java:2172)
>         org.apache.derby.impl.sql.compile.OptimizerImpl.costOptimizable(Optimiz\
> erImpl.java:1985)
>         org.apache.derby.impl.sql.compile.FromBaseTable.optimizeIt(FromBaseTabl\
> e.java:521)
>         org.apache.derby.impl.sql.compile.ProjectRestrictNode.optimizeIt(Projec\
> tRestrictNode.java:316)
>         org.apache.derby.impl.sql.compile.OptimizerImpl.costPermutation(Optimiz\
> erImpl.java:1939)
>         org.apache.derby.impl.sql.compile.SelectNode.optimize(SelectNode.java:1\
> 916)
>         org.apache.derby.impl.sql.compile.DMLStatementNode.optimizeStatement(DM\
> LStatementNode.java:315)
>         org.apache.derby.impl.sql.compile.CursorNode.optimizeStatement(CursorNo\
> de.java:558)
>         org.apache.derby.impl.sql.GenericStatement.prepMinion(GenericStatement.\
> java:381)
>         org.apache.derby.impl.sql.GenericStatement.prepare(GenericStatement.jav\
> a:90)
>         org.apache.derby.impl.sql.conn.GenericLanguageConnectionContext.prepare\
> InternalStatement(GenericLanguageConnectionContext.java:1101)
>         org.apache.derby.impl.jdbc.EmbedPreparedStatement.<init>(EmbedPreparedS\
> tatement.java:131)
>         org.apache.derby.impl.jdbc.EmbedPreparedStatement20.<init>(EmbedPrepare\
> dStatement20.java:82)
>         org.apache.derby.impl.jdbc.EmbedPreparedStatement30.<init>(EmbedPrepare\
> dStatement30.java:63)
>         org.apache.derby.impl.jdbc.EmbedPreparedStatement40.<init>(EmbedPrepare\
> dStatement40.java:40)
>         org.apache.derby.jdbc.Driver40.newEmbedPreparedStatement(Driver40.java:\
> 105)
>         org.apache.derby.impl.jdbc.EmbedConnection.prepareStatement(EmbedConnec\
> tion.java:1613)
>         org.apache.derby.impl.jdbc.EmbedConnection.prepareStatement(EmbedConnec\
> tion.java:1441)
> ...
> Thread name=derby.rawStoreDaemon id=11 priority=5 state=TIMED_WAITING isdaemon=\
> true
>         java.lang.Object.wait(Native Method)
>         org.apache.derby.impl.services.daemon.BasicDaemon.rest(BasicDaemon.java\
> :571)
>         org.apache.derby.impl.services.daemon.BasicDaemon.run(BasicDaemon.java:\
> 388)
>         java.lang.Thread.run(Thread.java:662)
> ---------------
> Cleanup action completed
> Thu Mar 31 13:26:28 EDT 2011 Thread[Thread-472,5,main] (XID = 671), (SESSIONID \
> = 7), (DATABASE = /data/mcf/trunk/test-output/filesystem/dbname), (DRDAID = nul\
> l), Cleanup action starting
> Thu Mar 31 13:26:28 EDT 2011 Thread[Thread-472,5,main] (XID = 671), (SESSIONID \
> = 7), (DATABASE = /data/mcf/trunk/test-output/filesystem/dbname), (DRDAID = nul\
> l), Failed Statement is: INSERT INTO ingeststatus (id,changecount,dockey,lastve\
> rsion,firstingest,connectionname,authorityname,urihash,lastoutputversion,lastin\
> gest,docuri) VALUES (?,?,?,?,?,?,?,?,?,?,?) with 11 parameters begin parameter \
> #1: 1301592386640 :end parameter begin parameter #2: 1 :end parameter begin par\
> ameter #3: File Connection:C6F9B4AFF62656360BA4A21131C1D3C4A72922BE :end parame\
> ter begin parameter #4: CLOB(16) :end parameter begin parameter #5: 13015923887\
> 06 :end parameter begin parameter #6: Null Connection :end parameter begin para\
> meter #7:  :end parameter begin parameter #8: 22FF219C5BA7FDE80DDA8DDDAC753194F\
> 04FAB13 :end parameter begin parameter #9: CLOB(0) :end parameter begin paramet\
> er #10: 1301592388706 :end parameter begin parameter #11: CLOB(62) :end paramet\
> er
> ERROR 23505: The statement was aborted because it would have caused a duplicate\
>  key value in a unique or primary key constraint or unique index identified by \
> 'I1301592382805' defined on 'INGESTSTATUS'.
>         at org.apache.derby.iapi.error.StandardException.newException(StandardE\
> xception.java:303)
>         at org.apache.derby.impl.sql.execute.IndexChanger.insertAndCheckDups(In\
> dexChanger.java:466)
>         at org.apache.derby.impl.sql.execute.IndexChanger.doInsert(IndexChanger\
> .java:383)
>         at org.apache.derby.impl.sql.execute.IndexChanger.insert(IndexChanger.j\
> ava:590)
>         at org.apache.derby.impl.sql.execute.IndexSetChanger.insert(IndexSetCha\
> nger.java:268)
>         at org.apache.derby.impl.sql.execute.RowChangerImpl.insertRow(RowChange\
> rImpl.java:453)
>         at org.apache.derby.impl.sql.execute.InsertResultSet.normalInsertCore(I\
> nsertResultSet.java:1028)
>         at org.apache.derby.impl.sql.execute.InsertResultSet.open(InsertResultS\
> et.java:505)
>         at org.apache.derby.impl.sql.GenericPreparedStatement.executeStmt(Gener\
> icPreparedStatement.java:436)
>         at org.apache.derby.impl.sql.GenericPreparedStatement.execute(GenericPr\
> eparedStatement.java:317)
>         at org.apache.derby.impl.jdbc.EmbedStatement.executeStatement(EmbedStat\
> ement.java:1241)
>         at org.apache.derby.impl.jdbc.EmbedPreparedStatement.executeStatement(E\
> ement.java:1241)
>         at org.apache.derby.impl.jdbc.EmbedPreparedStatement.executeStatement(E\
> mbedPreparedStatement.java:1686)
>         at org.apache.derby.impl.jdbc.EmbedPreparedStatement.executeUpdate(Embe\
> dPreparedStatement.java:308)
>         at org.apache.manifoldcf.core.database.Database.execute(Database.java:\
> 606)
>         at org.apache.manifoldcf.core.database.Database$ExecuteQueryThread.run\
> (Database.java:421)
> Cleanup action completed
> ----------------------------------------------------------------

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