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From Bandeep Singh <bsi...@phemi.com>
Subject Re: [External] Re: How to use cTakes with SPARK
Date Fri, 12 Aug 2016 19:33:19 GMT
Thanks Brandon !

I tried that example, it doesn't work any more with latest cTakes libraries.

Regards,
Bandeep



On Fri, Aug 12, 2016 at 12:28 PM, Geise, Brandon D. <bdgeise@geisinger.edu>
wrote:

> I haven’t tried this but maybe have a look here:
> https://svn.apache.org/repos/asf/ctakes/sandbox/ctakes-
> spark-streaming-twitter/
>
>
>
> Thanks,
>
> Brandon
>
>
>
> *From:* Bandeep Singh [mailto:bsingh@phemi.com]
> *Sent:* Friday, August 12, 2016 3:16 PM
> *To:* user@ctakes.apache.org
> *Subject:* [External] Re: How to use cTakes with SPARK
>
>
>
> Hi,
>
>
>
> Thanks for your reply !
>
>
>
> But I am wondering if somebody has run cTakes using SPARK and actually
> succeed. If yes, some resources/examples would be really helpful.
>
>
>
> Budha I tried building SPARK with cTAKES, however the when i execute a
> sime HelloWorldAnnotator.java function it threw exceptions, which is
> suspect is because the example was written a long back and doesn't comply
> any more with the current libraries.
>
>
>
> Thanks Again,
>
> Bandeep
>
>
>
> On Fri, Aug 12, 2016 at 10:21 AM, buddha <buddha_314@yahoo.com> wrote:
>
> cTAKES is a Java project, so it should work “out of the box” with the Java
> Spark libraries.  If you’re not used to using Spark + Java, then I would
> not recommend starting with cTAKES.  I suggest you start by using cTAKES as
> a Maven dependency alongside the Spark Maven dependencies.
>
>
>
> If you want to use pySpark, then you are in the business of using Java
> libs from Python, like in http://stackoverflow.com/
> questions/476968/using-a-java-library-from-python
> <https://na01.safelinks.protection.outlook.com/?url=http%3a%2f%2fstackoverflow.com%2fquestions%2f476968%2fusing-a-java-library-from-python&data=01%7c01%7cbdgeise%40geisinger.edu%7cb2d65ee9cb8f4b32d8df08d3c2e5284b%7c37d46c567c664402a16055c2313b910d%7c0&sdata=yVV3Va5%2ba9NPQM%2fBU2gVhl6NqdAwmbtCEc%2bgwix1WkA%3d>
and
> there is nothing special about cTAKES.
>
>
>
> cTAKES uses UIMA on the backend, and this can be extremely confusing to
> new users.  Maybe you should isolate your problems
>
>
>
> 1. Use Spark + Java libs
>
> 2. Use Python + Java libs
>
> 3. Learn cTAKES on it’s own turf.  Namely, Java
>
>
>
> Apache projects notoriously have dependency problems, and Spark is no
> exception.  HA!  “Exception”-- I’m funny.  Anyway, don’t expect the two to
> play together nicely at first.
>
>
>
> b
>
>
>
> ~~~~~
>
> May All Your Sequences Converge
>
>
>
> On Aug 12, 2016, at 10:05 AM, Bandeep Singh <bsingh@phemi.com> wrote:
>
>
>
> Hi Team,
>
>
>
> I am very new to cTAKES and just started learning how to use it.
>
> I am wondering how to use cTakes API with SPARk (pyspark preferably) for
> Big data.
>
> Can somebody point me in the right direction.
>
> Till now I downloaded cTakes jars and tried building it with SPARK, but it
> threw me some resource allocation exception.
>
>
>
> Any response will be highly appreciated.
>
>
> Thanks,
>
> Bandeep
>
>
>
>
>
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