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From nishant kumar <kumar.nisha...@gmail.com>
Subject Re: [External] Re: ctakessnorx and the fast pipeline
Date Mon, 22 Aug 2016 05:24:23 GMT
Following is another useful mail related to the dictionary-gui tool:

http://mail-archives.apache.org/mod_mbox/ctakes-dev/201601.mbox/%3CCA+jqmuyBcv-h67bxg=gummpVkE_khOXpSfRvSqx=jK3pzZ7WGA@mail.gmail.com%3E


thanks
Nishant

On Mon, Aug 8, 2016 at 9:59 AM, Geise, Brandon D. <bdgeise@geisinger.edu>
wrote:

> I’d also recommend checking out the GUI Sean created.
>
>
>
> https://svn.apache.org/repos/asf/ctakes/sandbox/dictionary-gui/
>
>
>
> It most likely will make the process a little easier.
>
>
>
> Thanks,
>
> Brandon
>
>
>
> *From:* Jessica Glover [mailto:glover.jessica.m@gmail.com]
> *Sent:* Friday, August 05, 2016 4:27 PM
> *To:* user@ctakes.apache.org
> *Subject:* [External] Re: ctakessnorx and the fast pipeline
>
>
>
> I found this to be a helpful thread when I used Sean Finan's dictionary
> tool in the cTakes sandbox to create my own dictionary:
>
> http://ctakes.markmail.org/search/?q=fast+dictionary+update#query:fast%
> 20dictionary%20update+page:1+mid:qubgmr65aagpu4z7+state:results
> <https://na01.safelinks.protection.outlook.com/?url=http%3a%2f%2fctakes.markmail.org%2fsearch%2f%3fq%3dfast%2bdictionary%2bupdate%23query%3afast%2520dictionary%2520update%2bpage%3a1%2bmid%3aqubgmr65aagpu4z7%2bstate%3aresults&data=01%7c01%7cbdgeise%40geisinger.edu%7cdb8fefb5101045bfc8e608d3bd6eea95%7c37d46c567c664402a16055c2313b910d%7c0&sdata=ozDAy%2b77dCj8N4me6iRhE1uqiYlbmt7HYvUa4ET9wDM%3d>
>
>
>
> Before you use the dictionary tool, you will need to create a subset of
> the UMLS Metathesaurus using the Metamorphosys tool, which you can read
> about here:
>
> http://www.ncbi.nlm.nih.gov/books/NBK9683/
> <https://na01.safelinks.protection.outlook.com/?url=http%3a%2f%2fwww.ncbi.nlm.nih.gov%2fbooks%2fNBK9683%2f&data=01%7c01%7cbdgeise%40geisinger.edu%7cdb8fefb5101045bfc8e608d3bd6eea95%7c37d46c567c664402a16055c2313b910d%7c0&sdata=FKEybPx0ofdV8wNzmzdfpb5doYen9%2b4ryay7UpaXJnc%3d>
>
>
>
> Hopefully that will give you a good starting point.
>
>
>
> Best,
>
> Jessica
>
>
>
>
>
>
>
> On Thu, Aug 4, 2016 at 9:20 AM, Guy Engelhard <guye@algotec.co.il> wrote:
>
> Hello all,
>
>
>
> I'd like to modify some of the dictionary terms in the fast clinical
> pipeline.
>
>
>
> The only reference I found online is the following thread:
>
>
>
> http://dev.ctakes.apache.narkive.com/kvWEUaRR/ctakessorx-for-
> aggregateplaintextfastumlsprocessor-xml
> <https://na01.safelinks.protection.outlook.com/?url=http%3a%2f%2fdev.ctakes.apache.narkive.com%2fkvWEUaRR%2fctakessorx-for-aggregateplaintextfastumlsprocessor-xml&data=01%7c01%7cbdgeise%40geisinger.edu%7cdb8fefb5101045bfc8e608d3bd6eea95%7c37d46c567c664402a16055c2313b910d%7c0&sdata=IO0SxMAXU%2bJsRTiVGcM1WVwm3PQFyqCZonJ4KermssQ%3d>
>
>
>
> which didn't help too much.
>
>
>
> Do you know if there is some more documentation on how to change/build a
> dictionary for the fast pipeline?
>
>
>
> Thanks,
>
>
>
> Guy Engelhard
>
>
>
> ------------------------------
>
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