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From Pei Chen <chen...@apache.org>
Subject Re: How to use cTAKES from the command line?
Date Tue, 06 Oct 2015 20:21:18 GMT
Hi Franck,
There was a similar questions on this topic:
In particular, you can run CPE directly from the command line w/o the UI.

Check out:
http://mail-archives.apache.org/mod_mbox/ctakes-dev/201505.mbox/%3CCAOsyzK3jxpktW5esFnhm2doCv_4JiQpuqQgAOer6wv9FsNAm4Q@mail.gmail.com%3E

On Sun, Oct 4, 2015 at 3:00 PM, Franck Dernoncourt
<franck.dernoncourt@gmail.com> wrote:
> Hi,
>
> I wonder how to use cTAKES from the command line.
>
> E.g. :
>  - I have a file note.txt that contains some text like "Patient had elevated
> blood sugar but tests confirm no diabetes.  Patient's father had adult onset
> diabetes."
>  - I want to use the provided analysis engine
> "\apache-ctakes-3.2.2-bin\apache-ctakes-3.2.2\desc\ctakes-clinical-pipeline\desc\analysis_engine\AggregatePlaintextUMLSProcessor.xml"
>
> How can I get the analyse engine's output (viz. the annotations) using the
> command line (i.e. without using graphical user interfaces such as UIMA CAS
> Visual Debugger or the Collection Processing Engine)? I'd prefer to use to
> use the provided JAR files rather than having to compile the code.
>
> The question is fairly simple but I couldn't find the information in
> cTAKES's README (https://svn.apache.org/repos/asf/ctakes/trunk/README) or on
> Confluence (https://cwiki.apache.org/confluence/display/CTAKES/cTAKES+3.0).
>
> Thanks,
> Franck
>
>
> ----
> Franck Dernoncourt
> francky@mit.edu
> http://francky.me
>
>
>

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