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From Justin Zhang <justinzhang...@gmail.com>
Subject how to run i2b2 data
Date Wed, 05 Aug 2015 22:38:36 GMT
Hello everyone,

I am running ctakes with i2b2 data
https://www.i2b2.org/NLP/DataSets/Main.php

In each xml file, there are multiple patient records. I am able to separate
each patient into single files and process them with "runCPE.sh"

Is there a way to convert this single xml file into the format "ctakes"
accepted, and process as a single input file, and generate a single output
file (results labelled by patient id). For example, each patient id has a
"smoking status".

Thanks,

-- 
Justin

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