Return-Path: X-Original-To: apmail-ctakes-user-archive@www.apache.org Delivered-To: apmail-ctakes-user-archive@www.apache.org Received: from mail.apache.org (hermes.apache.org [140.211.11.3]) by minotaur.apache.org (Postfix) with SMTP id 3E64410C7B for ; Sun, 22 Dec 2013 17:26:07 +0000 (UTC) Received: (qmail 97402 invoked by uid 500); 22 Dec 2013 17:26:04 -0000 Delivered-To: apmail-ctakes-user-archive@ctakes.apache.org Received: (qmail 97361 invoked by uid 500); 22 Dec 2013 17:25:57 -0000 Mailing-List: contact user-help@ctakes.apache.org; run by ezmlm Precedence: bulk List-Help: List-Unsubscribe: List-Post: List-Id: Reply-To: user@ctakes.apache.org Delivered-To: mailing list user@ctakes.apache.org Received: (qmail 97354 invoked by uid 99); 22 Dec 2013 17:25:54 -0000 Received: from nike.apache.org (HELO nike.apache.org) (192.87.106.230) by apache.org (qpsmtpd/0.29) with ESMTP; Sun, 22 Dec 2013 17:25:54 +0000 X-ASF-Spam-Status: No, hits=1.5 required=5.0 tests=HTML_MESSAGE,MIME_QP_LONG_LINE,RCVD_IN_DNSWL_LOW,SPF_PASS X-Spam-Check-By: apache.org Received-SPF: pass (nike.apache.org: domain of tengpan@udel.edu designates 209.85.213.173 as permitted sender) Received: from [209.85.213.173] (HELO mail-ig0-f173.google.com) (209.85.213.173) by apache.org (qpsmtpd/0.29) with ESMTP; Sun, 22 Dec 2013 17:25:47 +0000 Received: by mail-ig0-f173.google.com with SMTP id uq10so19469562igb.0 for ; Sun, 22 Dec 2013 09:25:26 -0800 (PST) X-Google-DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=1e100.net; s=20130820; h=x-gm-message-state:subject:references:from:content-type:in-reply-to :message-id:date:to:content-transfer-encoding:mime-version; bh=bTH7Ujwx0FcsQHiBNvZFNgF08pF1N91b5xLf6nQr2Ck=; b=NVoL08F6hdDDL/OnveBbbbxTVZO94+4mkeD7sh4ZDxuhyK2RZ//Bcs3+JlipInscFA 776EtsAGM98ct5Ri4/KukF5MiqtskFQt5jU7JBFwdJ7oIJtOY8iMkjZOj94u9tQA3hSZ aOHD2HAa3ZsDdpd4l4Y/S3ilO/YBRAMuTNCt3CPNEHZ+lWb203iGU2jFbB4vsNAGEC7e UO+U6tN1xDBPfJJu3EAnnarrvxptvCSbLxAa1+9GJ0UMRxPbYjWPRl8jlxnQg+e7Rdqy NfqQOssqODetB3sJw5l6UfWMwGSUCXmihmuPKwDkKhin5UVJhGFDzfjYwO6rec2tyDjK mOCg== X-Gm-Message-State: ALoCoQkK2NbrjmX31ihKPzxbRI3j8axNbcprd+qCM6meHApT+FRR/ZDS7Q9ub1LIbzD/b+oZH6fg X-Received: by 10.50.43.163 with SMTP id x3mr17029696igl.41.1387733125839; Sun, 22 Dec 2013 09:25:25 -0800 (PST) Received: from [10.235.151.82] ([166.137.105.135]) by mx.google.com with ESMTPSA id s4sm22055414ige.0.2013.12.22.09.25.24 for (version=TLSv1 cipher=ECDHE-RSA-RC4-SHA bits=128/128); Sun, 22 Dec 2013 09:25:24 -0800 (PST) Subject: Re: Help running AggregatePlaintextProcessor References: From: Pan Teng Content-Type: multipart/alternative; boundary=Apple-Mail-103D4CCE-5549-4CFE-9457-6A5D0F31E126 X-Mailer: iPhone Mail (11B554a) In-Reply-To: Message-Id: <4AB98F15-CF62-4598-A77F-989AEA205D3E@udel.edu> Date: Sun, 22 Dec 2013 12:25:18 -0500 To: "user@ctakes.apache.org" Content-Transfer-Encoding: 7bit Mime-Version: 1.0 (1.0) X-Virus-Checked: Checked by ClamAV on apache.org --Apple-Mail-103D4CCE-5549-4CFE-9457-6A5D0F31E126 Content-Type: text/plain; charset=us-ascii Content-Transfer-Encoding: quoted-printable Hi Josh, I tried to increased the heap size by editing both the runctakesCVD.sh file a= nd runctakesCPE.sh file. For you maybe you can try the bat file for windows?= Hope this will work for you too. Happy holiday everyone! \^_^/ Pan > On Dec 22, 2013, at 6:44 AM, Joshua Weiner wrote= : >=20 > Hi Paula, >=20 > Thank you SO much for your response. I have been literally trying to fix t= his for 5+ hours. I don't have permissions to use the ULMS version yet so I a= m trying to make this work. Unfortunately I am not using eclipse so his meth= od for increasing does not make sense. Can you expand? Were you in eclipse? P= reviously, i googled how to increase Heapsize, and changed settings in my ja= va application. If I go to configure Java Control Panel I added the followin= g runtime parameter: > -Xmx2048m for both user and system... to no avail. >=20 > I sincerely appreciate your help. Are you telling me that when I get the U= LMS version it won't use as much memory? >=20 > THanks, > Josh >=20 >=20 >=20 >=20 >> On Sun, Dec 22, 2013 at 2:36 AM, digital paula w= rote: >> Hi Josh, >> =20 >> Yes, I had the same problem but my friend Samir helped me out. :-) You h= ave to increase your JRE memory. Please see my post and Samir's from Octobe= r, I think it was early October. =20 >> =20 >> Actually the ULMS version of the AggregatePlaintextProcessor is more imp= ortant. =20 >> =20 >> Regards, >> Paula >> =20 >> From: joshuaweiner2@gmail.com >> Date: Sat, 21 Dec 2013 19:11:52 -0500 >> Subject: Help running AggregatePlaintextProcessor >> To: user@ctakes.apache.org >>=20 >>=20 >> Hello everyone, >>=20 >> I am trying to use cTAKES (just downloaded it) and when trying to load th= e analysis engine AE AggregatePlaintextProcessor (per this link: https://cw= iki.apache.org/confluence/display/CTAKES/cTAKES+3.1+User+Install+Guide#cTAKE= S3.1UserInstallGuide-Prerequisites) >>=20 >> I get this error: >> Loading model: >> ................................ >> scope model: /C:/apache-ctakes-3.1.0/resources/org/apache/ctakes/assertio= n/models/scope.model >> Exception in thread "AWT-EventQueue-0" java.lang.OutOfMemoryError: GC ove= rhead limit exceeded >>=20 >> I am on Windows 8, 8gb of ram. It appears that other AE work.. but I know= AggregatePlaintextProcessor is the most important one. >>=20 >> Thank you so much for any help! This is very important to me. Please fee= l free to respond to me directly at my email address: joshuaweiner2@gmail.co= m=20 >>=20 >> Josh >>=20 >>=20 >>=20 >> --=20 >> Joshua S. Weiner >> joshuaweiner2@gmail.com >> 201.638.0047 >=20 >=20 >=20 > --=20 > Joshua S. Weiner > joshuaweiner2@gmail.com > 201.638.0047 --Apple-Mail-103D4CCE-5549-4CFE-9457-6A5D0F31E126 Content-Type: text/html; charset=utf-8 Content-Transfer-Encoding: quoted-printable
Hi Josh,

I tr= ied to increased the heap size by editing both the runctakesCVD.sh file and r= unctakesCPE.sh file. For you maybe you can try the bat file for windows? Hop= e this will work for you too. Happy holiday everyone!  \^_^/
=
Pan

On Dec 22, 2013, at 6:44 AM, Joshua Weiner &= lt;joshuaweiner2@gmail.com>= ; wrote:

Hi Pau= la,

Thank you SO much for your response. I have been literally tryin= g to fix this for 5+ hours. I don't have permissions to use the ULMS version= yet so I am trying to make this work. Unfortunately I am not using eclipse s= o his method for increasing does not make sense. Can you expand? Were you in= eclipse? Previously, i googled how to increase Heapsize, and changed settin= gs in my java application. If I go to configure Java Control Panel I added t= he following runtime parameter:
-Xmx2048m for both user and system... to no avail.

I sincerely appreciate your help. Are you telling me that when I ge= t the ULMS version it won't use as much memory?

THanks,
Josh




On Sun, Dec 22, 2013 at 2:36= AM, digital paula <cybersation@hotmail.com> wrote:
Hi Josh,
 
Yes, I had the same problem but m= y friend Samir helped me  out. :-)  You have to increase = ;your JRE memory.  Please see my post and Samir's from October, I t= hink it was early October.  
 
Actually the ULMS version of the AggregatePlaintextProcessor&= nbsp; is more important. 
 
Regards,
Paula
 = ;
From: joshuaweiner2@gmail.com
Date: Sat, 21 Dec 2013 19:11:52 -0500
Subject: Help running AggregatePlai= ntextProcessor
To: user@ctakes.apache.org


Hello everyone,

I am trying to use c= TAKES (just downloaded it) and when trying to load the analysis engine AE &n= bsp;AggregatePlaintextProcessor (per this link: https://cwiki.apache.org/confluence/= display/CTAKES/cTAKES+3.1+User+Install+Guide#cTAKES3.1UserInstallGuide-Prere= quisites)

I get this error:
Loading model:
..............= ..................
scope model: /C:/apache-ctakes-3.1.0/resources/= org/apache/ctakes/assertion/models/scope.model
Exception in thread= "AWT-EventQueue-0" java.lang.OutOfMemoryError: GC overhead limit exceeded

I am on Windows 8, 8gb of ram. It appears that other AE w= ork.. but I know AggregatePlaintextProcessor is the most important one.

Thank you so much for any help!  This is very important to me= . Please feel free to respond to me directly at my email address: joshuaweiner2@gmail.com 

Josh



= --
Joshua S. Weiner



--
Joshua S. Wei= ner
201.638.0047
= --Apple-Mail-103D4CCE-5549-4CFE-9457-6A5D0F31E126--