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From Snehal <snehal.ku...@gmail.com>
Subject Re: Help configuring ctakes for disease/medication Annotation detection
Date Tue, 09 Jul 2013 18:16:29 GMT
Hello Pei,

With the help of your example I have successfully been to annotate the
text with medication/diseases. Thanks!

Regards,
Snehal

On Tue, Jul 9, 2013 at 10:30 AM, Snehal <snehal.kumar@gmail.com> wrote:
> Hi Pei,
>
> Thanks for the reply. What window annotation do you think would
> suffice for just identifying the presence of disease/drug or
> medication keywords? I see that there are Sentence, Segment, Paragraph
> and LookupWindowAnnotation.
>
> Also, I can't find CopyNPChunksToLookupWindowAnnotations class in
> ctakes 3.0.1. Is this added only in 3.1?
>
> Regards,
> Snehal
>
> On Tue, Jul 9, 2013 at 8:07 AM, Chen, Pei
> <Pei.Chen@childrens.harvard.edu> wrote:
>> Hi Snehal,
>>
>>> -----Original Message-----
>>> From: Snehal [mailto:snehal.kumar@gmail.com]
>>> Sent: Tuesday, July 09, 2013 11:00 AM
>>> To: user
>>> Subject: Re: Help configuring ctakes for disease/medication Annotation
>>> detection
>>> Does ctakes require all the different components such as Chunker,POS
>>> tagger etc; for identifying this?
>>
>> The short answer is yes.  The longer answer is that the test case desc is configured
to use the below Type to constrain the lookup window (which is essentially constrained to
Noun Phrases hence the prerequisites).
>> <property key="windowAnnotations" value="org.apache.ctakes.typesystem.type.textspan.LookupWindowAnnotation"/>
>> [Of course, that can be modified/configured for your use case(s).]
>>
>> --Pei
>>
>>

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