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From Apache Jenkins Server <jenk...@builds.apache.org>
Subject Build failed in Jenkins: ctakes-trunk-compiletest #1129
Date Thu, 16 Nov 2017 22:28:49 GMT
See <https://builds.apache.org/job/ctakes-trunk-compiletest/1129/display/redirect?page=changes>

Changes:

[alexz] CTAKES-479: skip testCPE when UMLS credentials not exported as env vars

------------------------------------------
[...truncated 549.99 KB...]
  found:    List
<https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/LookupParseUtilitiesRefactor.java>:[302,64]
[unchecked] unchecked conversion
[ERROR]   required: List<Element>
  found:    List
<https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/UmlsDictionaryLookupAnnotator.java>:[75,75]
error: package UmlsEnvironmentConfiguration does not exist
[ERROR] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/UmlsDictionaryLookupAnnotator.java>:[76,78]
error: package UmlsEnvironmentConfiguration does not exist
[ERROR] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/UmlsDictionaryLookupAnnotator.java>:[77,76]
error: package UmlsEnvironmentConfiguration does not exist
[ERROR] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/UmlsDictionaryLookupAnnotator.java>:[78,74]
error: package UmlsEnvironmentConfiguration does not exist
[ERROR] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/UmlsDictionaryLookupAnnotator.java>:[80,36]
error: cannot find symbol
[ERROR]   symbol:   variable UmlsEnvironmentConfiguration
  location: class UmlsDictionaryLookupAnnotator
<https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/UmlsDictionaryLookupAnnotator.java>:[133,13]
error: cannot find symbol
[ERROR]   symbol:   variable UmlsEnvironmentConfiguration
  location: class UmlsDictionaryLookupAnnotator
<https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/UmlsDictionaryLookupAnnotator.java>:[135,13]
error: cannot find symbol
[ERROR]   symbol:   variable UmlsEnvironmentConfiguration
  location: class UmlsDictionaryLookupAnnotator
<https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/strtable/FieldConstraintImpl.java>:[60,41]
[unchecked] unchecked call to compareTo(T) as a member of the raw type Comparable
[ERROR]   where T is a type-variable:
    T extends Object declared in interface Comparable
<https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/assertion/CreateAssertionLuceneIndexFromDelimitedFile.java>:[266,15]
[unchecked] unchecked call to put(K,V) as a member of the raw type Map
[ERROR]   where K,V are type-variables:
    K extends Object declared in interface Map
    V extends Object declared in interface Map
<https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/assertion/CreateAssertionLuceneIndexFromDelimitedFile.java>:[389,19]
[unchecked] unchecked method invocation: method sort in class Collections is applied to given
types
[ERROR]   required: List<T>,Comparator<? super T>
  found: List,OffsetComparator
  where T is a type-variable:
    T extends Object declared in method <T>sort(List<T>,Comparator<? super
T>)
<https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/assertion/CreateAssertionLuceneIndexFromDelimitedFile.java>:[389,20]
[unchecked] unchecked conversion
[ERROR]   required: List<T>
  found:    List
  where T is a type-variable:
    T extends Object declared in method <T>sort(List<T>,Comparator<? super
T>)
<https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/UmlsToSnomedLuceneConsumerImpl.java>:[94,34]
[deprecation] open(Directory) in IndexReader has been deprecated
[ERROR] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/ThreadedUmlsDictionaryLookupAnnotator.java>:[47,88]
error: package UmlsEnvironmentConfiguration does not exist
[ERROR] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/ThreadedUmlsDictionaryLookupAnnotator.java>:[48,88]
error: package UmlsEnvironmentConfiguration does not exist
[ERROR] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/ThreadedUmlsDictionaryLookupAnnotator.java>:[49,86]
error: package UmlsEnvironmentConfiguration does not exist
[ERROR] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/ThreadedUmlsDictionaryLookupAnnotator.java>:[50,90]
error: package UmlsEnvironmentConfiguration does not exist
[ERROR] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/ThreadedUmlsDictionaryLookupAnnotator.java>:[51,31]
error: cannot find symbol
[ERROR]   symbol:   variable UmlsEnvironmentConfiguration
  location: class ThreadedUmlsDictionaryLookupAnnotator
<https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/AssertionCuePhraseConsumerImpl.java>:[96,45]
[unchecked] unchecked method invocation: method organizeByOffset in class BaseLookupConsumerImpl
is applied to given types
[ERROR]   required: Iterator<LookupHit>
  found: Iterator
<https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/AssertionCuePhraseConsumerImpl.java>:[96,46]
[unchecked] unchecked conversion
[ERROR]   required: Iterator<LookupHit>
  found:    Iterator
<https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/algorithms/FirstTokenPermutationImpl.java>:[213,44]
[unchecked] unchecked conversion
[INFO] 28 errors 
[INFO] -------------------------------------------------------------
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[INFO] Reactor Summary:
[INFO] 
[INFO] Apache cTAKES ..................................... SUCCESS [4.412s]
[INFO] ctakes-gui-res .................................... SUCCESS [3.661s]
[INFO] Apache cTAKES Resources core ...................... SUCCESS [2.309s]
[INFO] Apache cTAKES common type system .................. SUCCESS [7.880s]
[INFO] Apache cTAKES utils ............................... SUCCESS [3.402s]
[INFO] Apache cTAKES core ................................ SUCCESS [22.913s]
[INFO] ctakes-gui ........................................ SUCCESS [3.852s]
[INFO] Apache cTAKES Resources pos-tagger ................ SUCCESS [2.399s]
[INFO] Apache cTAKES part-of-speech tagger ............... SUCCESS [4.732s]
[INFO] Apache cTAKES Resources ctakes-chunker-res ........ SUCCESS [2.304s]
[INFO] Apache cTAKES chunker ............................. SUCCESS [3.291s]
[INFO] Apache cTAKES document preprocessor ............... SUCCESS [3.697s]
[INFO] Apache cTAKES Resources dictionary-lookup ......... SUCCESS [9.836s]
[INFO] Apache cTAKES dictionary lookup ................... FAILURE [2.779s]
[INFO] Apache cTAKES context dependent tokenizer ......... SKIPPED
[INFO] Apache cTAKES Resources lvg ....................... SKIPPED
[INFO] Apache cTAKES LVG lexical tools ................... SKIPPED
[INFO] Apache cTAKES Resources ne-contexts ............... SKIPPED
[INFO] Apache cTAKES named entity contexts ............... SKIPPED
[INFO] Apache cTAKES Resources constituency-parser ....... SKIPPED
[INFO] Apache cTAKES Constituency Parser ................. SKIPPED
[INFO] Apache cTAKES Resources coreference ............... SKIPPED
[INFO] Apache cTAKES Resources temporal .................. SKIPPED
[INFO] Apache cTAKES Resources relation-extractor ........ SKIPPED
[INFO] Apache cTAKES Resources dictionary-lookup-fast-res  SKIPPED
[INFO] Apache cTAKES dictionary lookup fast .............. SKIPPED
[INFO] Apache cTAKES Resources assertion ................. SKIPPED
[INFO] Apache cTAKES Resources dependency-parser ......... SKIPPED
[INFO] Apache cTAKES Dependency Parser ................... SKIPPED
[INFO] Apache cTAKES Assertion ........................... SKIPPED
[INFO] ctakes-clinical-pipeline-res ...................... SKIPPED
[INFO] Apache cTAKES ctakes-clinical-pipeline ............ SKIPPED
[INFO] Apache cTAKES Relation Extractor .................. SKIPPED
[INFO] Apache cTAKES Temporal Information Extraction ..... SKIPPED
[INFO] Apache cTAKES CoReference Resolver ................ SKIPPED
[INFO] Apache cTAKES Resources drug-ner .................. SKIPPED
[INFO] Apache cTAKES Drug NER ............................ SKIPPED
[INFO] Apache cTAKES Resources side-effect ............... SKIPPED
[INFO] Apache cTAKES Side Effects ........................ SKIPPED
[INFO] Apache cTAKES Resources smoking-status ............ SKIPPED
[INFO] Apache cTAKES Smoking Status ...................... SKIPPED
[INFO] Apache cTAKES Resources assertion-zoner ........... SKIPPED
[INFO] Apache cTAKES Assertion's zoner ................... SKIPPED
[INFO] ctakes-examples-res ............................... SKIPPED
[INFO] ctakes-examples ................................... SKIPPED
[INFO] Apache cTAKES Resources ctakes-ytex-res ........... SKIPPED
[INFO] Apache cTAKES YTEX ................................ SKIPPED
[INFO] Apache cTAKES YTEX UIMA ........................... SKIPPED
[INFO] Apache cTAKES YTEX Web ............................ SKIPPED
[INFO] Apache cTAKES Distribution ........................ SKIPPED
[INFO] Apache cTAKES Regression-test ..................... SKIPPED
[INFO] Apache cTAKES template filler ..................... SKIPPED
[INFO] ------------------------------------------------------------------------
[INFO] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 1:40.044s
[INFO] Finished at: Thu Nov 16 22:27:59 UTC 2017
[INFO] Final Memory: 57M/781M
[INFO] ------------------------------------------------------------------------
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[ERROR] Failed to execute goal org.apache.maven.plugins:maven-compiler-plugin:2.4:compile
(default-compile) on project ctakes-dictionary-lookup: Compilation failure: Compilation failure:
[ERROR] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/UmlsDictionaryLookupAnnotator.java>:[22,32]
error: cannot find symbol
[ERROR] symbol:   class UmlsEnvironmentConfiguration
[ERROR] location: package org.apache.ctakes.core.ae
[ERROR] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/ThreadedUmlsDictionaryLookupAnnotator.java>:[21,32]
error: cannot find symbol
[ERROR] symbol:   class UmlsEnvironmentConfiguration
[ERROR] location: package org.apache.ctakes.core.ae
[ERROR] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/LookupParseUtilitiesRefactor.java>:[87,72]
[unchecked] unchecked conversion
[ERROR] required: List<Element>
[ERROR] found:    List
[ERROR] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/LookupParseUtilitiesRefactor.java>:[161,95]
[unchecked] unchecked conversion
[ERROR] required: List<Element>
[ERROR] found:    List
[ERROR] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/LookupParseUtilitiesRefactor.java>:[174,23]
[unchecked] unchecked method invocation: method addExcludeList in class LookupParseUtilitiesRefactor
is applied to given types
[ERROR] required: DictionaryEngine,List<Element>
[ERROR] found: DictionaryEngine,List
[ERROR] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/LookupParseUtilitiesRefactor.java>:[174,60]
[unchecked] unchecked conversion
[ERROR] required: List<Element>
[ERROR] found:    List
[ERROR] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/LookupParseUtilitiesRefactor.java>:[205,72]
[unchecked] unchecked conversion
[ERROR] required: List<Element>
[ERROR] found:    List
[ERROR] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/LookupParseUtilitiesRefactor.java>:[302,64]
[unchecked] unchecked conversion
[ERROR] required: List<Element>
[ERROR] found:    List
[ERROR] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/UmlsDictionaryLookupAnnotator.java>:[75,75]
error: package UmlsEnvironmentConfiguration does not exist
[ERROR] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/UmlsDictionaryLookupAnnotator.java>:[76,78]
error: package UmlsEnvironmentConfiguration does not exist
[ERROR] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/UmlsDictionaryLookupAnnotator.java>:[77,76]
error: package UmlsEnvironmentConfiguration does not exist
[ERROR] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/UmlsDictionaryLookupAnnotator.java>:[78,74]
error: package UmlsEnvironmentConfiguration does not exist
[ERROR] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/UmlsDictionaryLookupAnnotator.java>:[80,36]
error: cannot find symbol
[ERROR] symbol:   variable UmlsEnvironmentConfiguration
[ERROR] location: class UmlsDictionaryLookupAnnotator
[ERROR] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/UmlsDictionaryLookupAnnotator.java>:[133,13]
error: cannot find symbol
[ERROR] symbol:   variable UmlsEnvironmentConfiguration
[ERROR] location: class UmlsDictionaryLookupAnnotator
[ERROR] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/UmlsDictionaryLookupAnnotator.java>:[135,13]
error: cannot find symbol
[ERROR] symbol:   variable UmlsEnvironmentConfiguration
[ERROR] location: class UmlsDictionaryLookupAnnotator
[ERROR] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/strtable/FieldConstraintImpl.java>:[60,41]
[unchecked] unchecked call to compareTo(T) as a member of the raw type Comparable
[ERROR] where T is a type-variable:
[ERROR] T extends Object declared in interface Comparable
[ERROR] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/assertion/CreateAssertionLuceneIndexFromDelimitedFile.java>:[266,15]
[unchecked] unchecked call to put(K,V) as a member of the raw type Map
[ERROR] where K,V are type-variables:
[ERROR] K extends Object declared in interface Map
[ERROR] V extends Object declared in interface Map
[ERROR] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/assertion/CreateAssertionLuceneIndexFromDelimitedFile.java>:[389,19]
[unchecked] unchecked method invocation: method sort in class Collections is applied to given
types
[ERROR] required: List<T>,Comparator<? super T>
[ERROR] found: List,OffsetComparator
[ERROR] where T is a type-variable:
[ERROR] T extends Object declared in method <T>sort(List<T>,Comparator<? super
T>)
[ERROR] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/assertion/CreateAssertionLuceneIndexFromDelimitedFile.java>:[389,20]
[unchecked] unchecked conversion
[ERROR] required: List<T>
[ERROR] found:    List
[ERROR] where T is a type-variable:
[ERROR] T extends Object declared in method <T>sort(List<T>,Comparator<? super
T>)
[ERROR] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/UmlsToSnomedLuceneConsumerImpl.java>:[94,34]
[deprecation] open(Directory) in IndexReader has been deprecated
[ERROR] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/ThreadedUmlsDictionaryLookupAnnotator.java>:[47,88]
error: package UmlsEnvironmentConfiguration does not exist
[ERROR] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/ThreadedUmlsDictionaryLookupAnnotator.java>:[48,88]
error: package UmlsEnvironmentConfiguration does not exist
[ERROR] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/ThreadedUmlsDictionaryLookupAnnotator.java>:[49,86]
error: package UmlsEnvironmentConfiguration does not exist
[ERROR] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/ThreadedUmlsDictionaryLookupAnnotator.java>:[50,90]
error: package UmlsEnvironmentConfiguration does not exist
[ERROR] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/ThreadedUmlsDictionaryLookupAnnotator.java>:[51,31]
error: cannot find symbol
[ERROR] symbol:   variable UmlsEnvironmentConfiguration
[ERROR] location: class ThreadedUmlsDictionaryLookupAnnotator
[ERROR] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/AssertionCuePhraseConsumerImpl.java>:[96,45]
[unchecked] unchecked method invocation: method organizeByOffset in class BaseLookupConsumerImpl
is applied to given types
[ERROR] required: Iterator<LookupHit>
[ERROR] found: Iterator
[ERROR] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/AssertionCuePhraseConsumerImpl.java>:[96,46]
[unchecked] unchecked conversion
[ERROR] required: Iterator<LookupHit>
[ERROR] found:    Iterator
[ERROR] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/algorithms/FirstTokenPermutationImpl.java>:[213,44]
[unchecked] unchecked conversion
[ERROR] -> [Help 1]
[ERROR] 
[ERROR] To see the full stack trace of the errors, re-run Maven with the -e switch.
[ERROR] Re-run Maven using the -X switch to enable full debug logging.
[ERROR] 
[ERROR] For more information about the errors and possible solutions, please read the following
articles:
[ERROR] [Help 1] http://cwiki.apache.org/confluence/display/MAVEN/MojoFailureException
[ERROR] 
[ERROR] After correcting the problems, you can resume the build with the command
[ERROR]   mvn <goals> -rf :ctakes-dictionary-lookup
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