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From Apache Jenkins Server <jenk...@builds.apache.org>
Subject Build failed in Jenkins: cTAKES-trunk-Java-1.8 » Apache cTAKES YTEX UIMA #36
Date Fri, 17 Nov 2017 19:37:17 GMT
See <https://builds.apache.org/job/cTAKES-trunk-Java-1.8/org.apache.ctakes$ctakes-ytex-uima/36/display/redirect>

------------------------------------------
[...truncated 203.47 KB...]
2017-11-17 19:19:44,202 INFO  org.hibernate.engine.transaction.internal.TransactionFactoryInitiator
 - HHH000399: Using default transaction strategy (direct JDBC transactions)
2017-11-17 19:19:44,202 INFO  org.hibernate.hql.internal.ast.ASTQueryTranslatorFactory  -
HHH000397: Using ASTQueryTranslatorFactory
2017-11-17 19:19:44,211 INFO  org.hibernate.cache.spi.UpdateTimestampsCache  - HHH000250:
Starting update timestamps cache at region: org.hibernate.cache.spi.UpdateTimestampsCache
2017-11-17 19:19:44,211 INFO  org.hibernate.cache.internal.StandardQueryCache  - HHH000248:
Starting query cache at region: org.hibernate.cache.internal.StandardQueryCache
2017-11-17 19:19:44,217 INFO  org.hibernate.id.enhanced.TableGenerator  - HHH000398: Explicit
segment value for id generator [PUBLIC.hibernate_sequences.sequence_name] suggested; using
default [default]
2017-11-17 19:19:44,268 WARN  org.hibernate.cache.ehcache.AbstractEhcacheRegionFactory  -
HHH020003: Could not find a specific ehcache configuration for cache named [org.apache.ctakes.ytex.uima.model.UimaType];
using defaults.
2017-11-17 19:19:44,270 WARN  org.hibernate.cache.ehcache.internal.strategy.EhcacheAccessStrategyFactoryImpl
 - HHH020007: read-only cache configured for mutable entity [org.apache.ctakes.ytex.uima.model.UimaType]
2017-11-17 19:19:44,522 INFO  org.springframework.orm.hibernate4.HibernateTransactionManager
 - Using DataSource [org.apache.commons.dbcp.BasicDataSource@4130955c] of Hibernate SessionFactory
for HibernateTransactionManager
2017-11-17 19:19:44,628 INFO  org.springframework.cache.ehcache.EhCacheManagerFactoryBean
 - Initializing EHCache CacheManager
2017-11-17 19:19:44,636 WARN  net.sf.ehcache.CacheManager  - Creating a new instance of CacheManager
using the diskStorePath "/tmp" which is already used by an existing CacheManager.
The source of the configuration was net.sf.ehcache.config.generator.ConfigurationSource$InputStreamConfigurationSource@5e99b9c.
The diskStore path for this CacheManager will be set to /tmp/ehcache_auto_created_1510946384636.
To avoid this warning consider using the CacheManager factory methods to create a singleton
CacheManager or specifying a separate ehcache configuration (ehcache.xml) for each CacheManager
instance.
2017-11-17 19:19:44,835 INFO  org.apache.ctakes.ytex.kernel.metric.ConceptSimilarityServiceImpl
 - begin initialization for concept graph: test
2017-11-17 19:19:44,836 INFO  org.apache.ctakes.ytex.kernel.dao.ConceptDaoImpl  - loading
concept graph from <https://builds.apache.org/job/cTAKES-trunk-Java-1.8/org.apache.ctakes$ctakes-ytex-uima/ws/target/test-classes/org/apache/ctakes/ytex/conceptGraph/test.gz>
2017-11-17 19:19:44,838 INFO  org.apache.ctakes.ytex.kernel.dao.ConceptDaoImpl  - concept
graph test, vertices: 7
2017-11-17 19:19:44,839 INFO  org.apache.ctakes.ytex.kernel.metric.ConceptSimilarityServiceImpl
 - initializing similarity measures
2017-11-17 19:19:44,843 INFO  org.apache.ctakes.ytex.kernel.metric.ConceptSimilarityServiceImpl
 - end initialization for concept graph: test
2017-11-17 19:19:45,216 INFO  org.hibernate.dialect.Dialect  - HHH000400: Using dialect: org.hibernate.dialect.HSQLDialect
2017-11-17 19:19:45,334 INFO  org.apache.ctakes.ytex.uima.mapper.DocumentMapperServiceImpl
 - document table name = PUBLIC.document
2017-11-17 19:19:45,337 DEBUG org.apache.ctakes.ytex.uima.mapper.DocumentMapperServiceImpl
 - docTableCols: {}
2017-11-17 19:19:45,363 TRACE org.apache.ctakes.ytex.uima.annotators.SenseDisambiguatorAnnotator
 - listConcept: [[dog], [animal, e coli], [cat]]
2017-11-17 19:19:45,363 TRACE org.apache.ctakes.ytex.uima.annotators.SenseDisambiguatorAnnotator
 - i: 1, conceptSenses: [animal, e coli]
2017-11-17 19:19:45,384 TRACE org.apache.ctakes.ytex.uima.annotators.SenseDisambiguatorAnnotator
 - i: 1, concept: animal
Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 9.457 sec
Running org.apache.ctakes.ytex.uima.annotators.NamedEntityRegexTest
2017-11-17 19:19:46,134 DEBUG org.apache.ctakes.ytex.uima.annotators.NamedEntityRegexAnnotator
 - NamedEntityRegex [code=C00TEST, regex=(?i)COUGH]
[cough]
Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 1.311 sec
Running org.apache.ctakes.ytex.uima.annotators.DBCollectionReaderTest
2017-11-17 19:19:48,779 INFO  org.apache.ctakes.ytex.uima.ApplicationContextHolder  - loading
ytex.properties from: <https://builds.apache.org/job/cTAKES-trunk-Java-1.8/org.apache.ctakes$ctakes-ytex-uima/ws/target/test-classes/org/apache/ctakes/ytex/ytex.properties>
2017-11-17 19:19:48,780 INFO  org.apache.ctakes.ytex.uima.ApplicationContextHolder  - beanRefContext=classpath*:org/apache/ctakes/ytex/uima/beanRefContext.xml
2017-11-17 19:19:48,852 INFO  org.springframework.context.support.ClassPathXmlApplicationContext
 - Refreshing org.springframework.context.support.ClassPathXmlApplicationContext@47af7f3d:
startup date [Fri Nov 17 19:19:48 UTC 2017]; root of context hierarchy
2017-11-17 19:19:48,901 INFO  org.springframework.beans.factory.xml.XmlBeanDefinitionReader
 - Loading XML bean definitions from URL [jar:file:/home/jenkins/jenkins-slave/workspace/cTAKES-trunk-Java-1.8/ctakes-ytex-res/target/ctakes-ytex-res-4.0.1-SNAPSHOT.jar!/org/apache/ctakes/ytex/uima/beanRefContext.xml]
2017-11-17 19:19:48,971 INFO  org.springframework.beans.factory.xml.XmlBeanDefinitionReader
 - Loading XML bean definitions from URL [file:/home/jenkins/jenkins-slave/workspace/cTAKES-trunk-Java-1.8/ctakes-ytex-res/src/main/resources/org/apache/ctakes/ytex/uima/beanRefContext.xml]
2017-11-17 19:19:48,981 INFO  org.springframework.beans.factory.support.DefaultListableBeanFactory
 - Overriding bean definition for bean 'ytexApplicationContext': replacing [Generic bean:
class [org.springframework.context.support.ClassPathXmlApplicationContext]; scope=; abstract=false;
lazyInit=false; autowireMode=0; dependencyCheck=0; autowireCandidate=true; primary=false;
factoryBeanName=null; factoryMethodName=null; initMethodName=null; destroyMethodName=null;
defined in URL [jar:file:/home/jenkins/jenkins-slave/workspace/cTAKES-trunk-Java-1.8/ctakes-ytex-res/target/ctakes-ytex-res-4.0.1-SNAPSHOT.jar!/org/apache/ctakes/ytex/uima/beanRefContext.xml]]
with [Generic bean: class [org.springframework.context.support.ClassPathXmlApplicationContext];
scope=; abstract=false; lazyInit=false; autowireMode=0; dependencyCheck=0; autowireCandidate=true;
primary=false; factoryBeanName=null; factoryMethodName=null; initMethodName=null; destroyMethodName=null;
defined in URL [file:/home/jenkins/jenkins-slave/workspace/cTAKES-trunk-Java-1.8/ctakes-ytex-res/src/main/resources/org/apache/ctakes/ytex/uima/beanRefContext.xml]]
2017-11-17 19:19:49,012 INFO  org.springframework.beans.factory.support.DefaultListableBeanFactory
 - Pre-instantiating singletons in org.springframework.beans.factory.support.DefaultListableBeanFactory@5f683daf:
defining beans [ytexApplicationContext]; root of factory hierarchy
2017-11-17 19:19:49,079 INFO  org.springframework.context.support.ClassPathXmlApplicationContext
 - Refreshing org.springframework.context.support.ClassPathXmlApplicationContext@6283d8b8:
startup date [Fri Nov 17 19:19:49 UTC 2017]; root of context hierarchy
2017-11-17 19:19:49,083 INFO  org.springframework.beans.factory.xml.XmlBeanDefinitionReader
 - Loading XML bean definitions from class path resource [org/apache/ctakes/ytex/beans-datasource.xml]
2017-11-17 19:19:49,315 INFO  org.springframework.beans.factory.xml.XmlBeanDefinitionReader
 - Loading XML bean definitions from class path resource [org/apache/ctakes/ytex/beans-kernel.xml]
2017-11-17 19:19:49,422 INFO  org.springframework.beans.factory.xml.XmlBeanDefinitionReader
 - Loading XML bean definitions from class path resource [org/apache/ctakes/ytex/beans-kernel-sim.xml]
2017-11-17 19:19:49,445 INFO  org.springframework.beans.factory.xml.XmlBeanDefinitionReader
 - Loading XML bean definitions from class path resource [org/apache/ctakes/ytex/uima/beans-uima.hbm.xml]
2017-11-17 19:19:49,474 INFO  org.springframework.beans.factory.xml.XmlBeanDefinitionReader
 - Loading XML bean definitions from class path resource [org/apache/ctakes/ytex/uima/beans-uima-dao.xml]
2017-11-17 19:19:49,513 INFO  org.springframework.beans.factory.xml.XmlBeanDefinitionReader
 - Loading XML bean definitions from class path resource [org/apache/ctakes/ytex/uima/beans-uima-mapper.xml]
2017-11-17 19:19:49,544 INFO  org.springframework.beans.factory.support.DefaultListableBeanFactory
 - Overriding bean definition for bean 'mapperOperation': replacing [Root bean: class [org.springframework.aop.aspectj.AspectJExpressionPointcut];
scope=prototype; abstract=false; lazyInit=false; autowireMode=0; dependencyCheck=0; autowireCandidate=true;
primary=false; factoryBeanName=null; factoryMethodName=null; initMethodName=null; destroyMethodName=null]
with [Root bean: class [org.springframework.aop.aspectj.AspectJExpressionPointcut]; scope=prototype;
abstract=false; lazyInit=false; autowireMode=0; dependencyCheck=0; autowireCandidate=true;
primary=false; factoryBeanName=null; factoryMethodName=null; initMethodName=null; destroyMethodName=null]
2017-11-17 19:19:49,701 INFO  org.springframework.beans.factory.config.PropertyPlaceholderConfigurer
 - Loading properties file from class path resource [org/apache/ctakes/ytex/ytex-default.properties]
2017-11-17 19:19:49,702 INFO  org.springframework.beans.factory.config.PropertyPlaceholderConfigurer
 - Loading properties file from class path resource [org/apache/ctakes/ytex/ytex.properties]
2017-11-17 19:19:49,702 INFO  org.springframework.beans.factory.config.PropertyPlaceholderConfigurer
 - Loading properties file from class path resource [org/apache/ctakes/ytex/ytex-umls.properties]
2017-11-17 19:19:49,763 INFO  org.springframework.beans.factory.support.DefaultListableBeanFactory
 - Pre-instantiating singletons in org.springframework.beans.factory.support.DefaultListableBeanFactory@5167f57d:
defining beans [org.springframework.beans.factory.config.PropertyPlaceholderConfigurer#0,ytexProperties,hibernateProperties,dataSource,txAdvice,txTemplate,txTemplateNew,transactionManager,org.springframework.aop.config.internalAutoProxyCreator,daoOperation,umlsDaoOperation,exporterOperation,wekaImporter,mapperOperation,treeOperation,utilOperation,corpusEvaluatorOperation,org.springframework.aop.support.DefaultBeanFactoryPointcutAdvisor#0,org.springframework.aop.support.DefaultBeanFactoryPointcutAdvisor#1,org.springframework.aop.support.DefaultBeanFactoryPointcutAdvisor#2,org.springframework.aop.support.DefaultBeanFactoryPointcutAdvisor#3,org.springframework.aop.support.DefaultBeanFactoryPointcutAdvisor#4,org.springframework.aop.support.DefaultBeanFactoryPointcutAdvisor#5,org.springframework.aop.support.DefaultBeanFactoryPointcutAdvisor#6,org.springframework.aop.support.DefaultBeanFactoryPointcutAdvisor#7,kernelEvaluationDao,conceptDao,umlsDao,wekaBagOfWordsExporter,gramMatrixExporter,documentResultInstanceImporter,wekaResultsImporter,classifierEvaluationDao,libSVMGramMatrixExporter,rGramMatrixExporter,libsvmUtil,instanceTreeBuilder,abstractNormKernel,equalityKernel,atttributeProductKernel,cacheManager,abstractCorpusKernelEvaluator,foldGenerator,kernelUtil,baseClassifierEvaluationParser,semiLEvaluationParser,libSVMParser,svmLightParser,svmlinParser,ClassifierEvaluationImporter,sparseDataExporter,sparseDataFormatterFactory,svmLightFormatterFactory,libSVMFormatterFactory,svmLinFormatterFactory,sgtFormatterFactory,sparseMatrixFormatterFactory,semiLFormatterFactory,wekaFormatterFactory,instanceDataExporter,infogainAttributeEval,rankerSearch,infogainAttributeSelection,wekaAttributeEvaluator,infoContentEvaluator,intrinsicInfoContentEvaluator,imputedFeatureEvaluator,cytoscapeHelper,abstractKernelCacheAdvice,pageRankService,conceptSimilarityService,abstractConceptKernel,abstractLinKernel,abstractSemanticSimKernel,mainSuiSemanticTypeKernel,tuiSemanticTypeKernel,wordSenseDisambiguator,sessionFactory,ytexDaoOperation,org.springframework.aop.support.DefaultBeanFactoryPointcutAdvisor#8,documentDao,namedEntityRegexDao,segmentRegexDao,org.springframework.aop.support.DefaultBeanFactoryPointcutAdvisor#9,ISO8601Converter,documentMapperService];
root of factory hierarchy
2017-11-17 19:19:49,828 INFO  org.springframework.beans.factory.config.PropertiesFactoryBean
 - Loading properties file from class path resource [org/apache/ctakes/ytex/ytex.properties]
2017-11-17 19:19:50,830 INFO  org.hibernate.annotations.common.Version  - HCANN000001: Hibernate
Commons Annotations {4.0.2.Final}
2017-11-17 19:19:50,846 INFO  org.hibernate.Version  - HHH000412: Hibernate Core {4.2.6.Final}
2017-11-17 19:19:50,850 INFO  org.hibernate.cfg.Environment  - HHH000206: hibernate.properties
not found
2017-11-17 19:19:50,852 INFO  org.hibernate.cfg.Environment  - HHH000021: Bytecode provider
name : javassist
2017-11-17 19:19:51,847 INFO  hsqldb.db.HSQLDB5FCB6B2545.ENGINE  - dataFileCache open start
2017-11-17 19:19:51,862 INFO  hsqldb.db.HSQLDB5FCB6B2545.ENGINE  - dataFileCache open end
2017-11-17 19:19:51,997 INFO  hsqldb.db.HSQLDB5FCB6B2545.ENGINE  - dataFileCache commit start
2017-11-17 19:19:52,000 INFO  hsqldb.db.HSQLDB5FCB6B2545.ENGINE  - dataFileCache commit end
2017-11-17 19:19:52,003 INFO  hsqldb.db.HSQLDB5FCB6B2545.ENGINE  - Database closed
2017-11-17 19:19:52,167 INFO  hsqldb.db.HSQLDB5FCB6B2545.ENGINE  - dataFileCache open start
2017-11-17 19:19:52,167 INFO  hsqldb.db.HSQLDB5FCB6B2545.ENGINE  - dataFileCache open end
2017-11-17 19:19:52,273 INFO  org.hibernate.dialect.Dialect  - HHH000400: Using dialect: org.hibernate.dialect.HSQLDialect
2017-11-17 19:19:52,416 WARN  org.hibernate.mapping.RootClass  - HHH000038: Composite-id class
does not override equals(): org.apache.ctakes.ytex.uima.model.AnnotationContainmentLink
2017-11-17 19:19:52,417 WARN  org.hibernate.mapping.RootClass  - HHH000039: Composite-id class
does not override hashCode(): org.apache.ctakes.ytex.uima.model.AnnotationContainmentLink
2017-11-17 19:19:52,421 INFO  org.hibernate.engine.transaction.internal.TransactionFactoryInitiator
 - HHH000399: Using default transaction strategy (direct JDBC transactions)
2017-11-17 19:19:52,426 INFO  org.hibernate.hql.internal.ast.ASTQueryTranslatorFactory  -
HHH000397: Using ASTQueryTranslatorFactory
2017-11-17 19:19:52,584 INFO  org.hibernate.cache.spi.UpdateTimestampsCache  - HHH000250:
Starting update timestamps cache at region: org.hibernate.cache.spi.UpdateTimestampsCache
2017-11-17 19:19:52,592 INFO  org.hibernate.cache.internal.StandardQueryCache  - HHH000248:
Starting query cache at region: org.hibernate.cache.internal.StandardQueryCache
2017-11-17 19:19:52,609 INFO  org.hibernate.id.enhanced.TableGenerator  - HHH000398: Explicit
segment value for id generator [PUBLIC.hibernate_sequences.sequence_name] suggested; using
default [default]
2017-11-17 19:19:52,811 WARN  org.hibernate.cache.ehcache.AbstractEhcacheRegionFactory  -
HHH020003: Could not find a specific ehcache configuration for cache named [org.apache.ctakes.ytex.uima.model.UimaType];
using defaults.
2017-11-17 19:19:52,814 WARN  org.hibernate.cache.ehcache.internal.strategy.EhcacheAccessStrategyFactoryImpl
 - HHH020007: read-only cache configured for mutable entity [org.apache.ctakes.ytex.uima.model.UimaType]
2017-11-17 19:19:53,468 INFO  org.springframework.orm.hibernate4.HibernateTransactionManager
 - Using DataSource [org.apache.commons.dbcp.BasicDataSource@53a5e217] of Hibernate SessionFactory
for HibernateTransactionManager
2017-11-17 19:19:54,091 INFO  org.springframework.cache.ehcache.EhCacheManagerFactoryBean
 - Initializing EHCache CacheManager
2017-11-17 19:19:54,100 WARN  net.sf.ehcache.CacheManager  - Creating a new instance of CacheManager
using the diskStorePath "/tmp" which is already used by an existing CacheManager.
The source of the configuration was net.sf.ehcache.config.generator.ConfigurationSource$InputStreamConfigurationSource@35e8316e.
The diskStore path for this CacheManager will be set to /tmp/ehcache_auto_created_1510946394100.
To avoid this warning consider using the CacheManager factory methods to create a singleton
CacheManager or specifying a separate ehcache configuration (ehcache.xml) for each CacheManager
instance.
2017-11-17 19:19:55,107 INFO  org.apache.ctakes.ytex.kernel.metric.ConceptSimilarityServiceImpl
 - begin initialization for concept graph: sct-rxnorm
2017-11-17 19:19:55,300 INFO  org.apache.ctakes.ytex.kernel.dao.ConceptDaoImpl  - could not
load conceptGraph from classpath, attempt to load from: <https://builds.apache.org/job/cTAKES-trunk-Java-1.8/org.apache.ctakes$ctakes-ytex-uima/ws/target/test-classes/org/apache/ctakes/ytex/conceptGraph/sct-rxnorm.gz>
2017-11-17 19:19:55,307 INFO  org.apache.ctakes.ytex.kernel.dao.ConceptDaoImpl  - <https://builds.apache.org/job/cTAKES-trunk-Java-1.8/org.apache.ctakes$ctakes-ytex-uima/ws/target/test-classes/org/apache/ctakes/ytex/conceptGraph/sct-rxnorm.gz>
not found, cannot load concept graph
2017-11-17 19:19:55,307 INFO  org.apache.ctakes.ytex.kernel.dao.ConceptDaoImpl  - could not
load conceptGraph: sct-rxnorm
2017-11-17 19:19:55,394 WARN  org.apache.ctakes.ytex.kernel.metric.ConceptSimilarityServiceImpl
 - concept graph null, name: sct-rxnorm
2017-11-17 19:19:55,395 INFO  org.apache.ctakes.ytex.kernel.metric.ConceptSimilarityServiceImpl
 - end initialization for concept graph: sct-rxnorm
2017-11-17 19:19:55,844 INFO  org.hibernate.dialect.Dialect  - HHH000400: Using dialect: org.hibernate.dialect.HSQLDialect
2017-11-17 19:19:56,095 INFO  org.apache.ctakes.ytex.uima.mapper.DocumentMapperServiceImpl
 - document table name = PUBLIC.document
2017-11-17 19:19:56,098 DEBUG org.apache.ctakes.ytex.uima.mapper.DocumentMapperServiceImpl
 - docTableCols: {}
2017-11-17 19:19:56,635 INFO  org.apache.ctakes.ytex.uima.DBCollectionReader  - loading document
with id = {INSTANCE_ID=0}
2017-11-17 19:19:56,659 INFO  org.apache.ctakes.ytex.uima.DBCollectionReader  - loading document
with id = {INSTANCE_ID=1}
2017-11-17 19:19:56,662 INFO  org.apache.ctakes.ytex.uima.DBCollectionReader  - loading document
with id = {INSTANCE_ID=2}
2017-11-17 19:19:56,664 INFO  org.apache.ctakes.ytex.uima.DBCollectionReader  - loading document
with id = {INSTANCE_ID=3}
2017-11-17 19:19:56,667 INFO  org.apache.ctakes.ytex.uima.DBCollectionReader  - loading document
with id = {INSTANCE_ID=4}
2017-11-17 19:19:56,669 INFO  org.apache.ctakes.ytex.uima.DBCollectionReader  - loading document
with id = {INSTANCE_ID=5}
2017-11-17 19:19:56,671 INFO  org.apache.ctakes.ytex.uima.DBCollectionReader  - loading document
with id = {INSTANCE_ID=6}
2017-11-17 19:19:56,673 INFO  org.apache.ctakes.ytex.uima.DBCollectionReader  - loading document
with id = {INSTANCE_ID=7}
2017-11-17 19:19:56,674 INFO  org.apache.ctakes.ytex.uima.DBCollectionReader  - loading document
with id = {INSTANCE_ID=8}
2017-11-17 19:19:56,676 INFO  org.apache.ctakes.ytex.uima.DBCollectionReader  - loading document
with id = {INSTANCE_ID=9}
2017-11-17 19:19:56,677 INFO  org.apache.ctakes.ytex.uima.DBCollectionReader  - loading document
with id = {INSTANCE_ID=10}
2017-11-17 19:19:56,679 INFO  org.apache.ctakes.ytex.uima.DBCollectionReader  - loading document
with id = {INSTANCE_ID=11}
2017-11-17 19:19:56,681 INFO  org.apache.ctakes.ytex.uima.DBCollectionReader  - loading document
with id = {INSTANCE_ID=12}
2017-11-17 19:19:56,685 INFO  org.apache.ctakes.ytex.uima.DBCollectionReader  - loading document
with id = {INSTANCE_ID=13}
2017-11-17 19:19:56,688 INFO  org.apache.ctakes.ytex.uima.DBCollectionReader  - loading document
with id = {INSTANCE_ID=14}
2017-11-17 19:19:56,691 INFO  org.apache.ctakes.ytex.uima.DBCollectionReader  - loading document
with id = {INSTANCE_ID=15}
2017-11-17 19:19:56,694 INFO  org.apache.ctakes.ytex.uima.DBCollectionReader  - loading document
with id = {INSTANCE_ID=16}
2017-11-17 19:19:56,696 INFO  org.apache.ctakes.ytex.uima.DBCollectionReader  - loading document
with id = {INSTANCE_ID=17}
2017-11-17 19:19:56,698 INFO  org.apache.ctakes.ytex.uima.DBCollectionReader  - loading document
with id = {INSTANCE_ID=18}
2017-11-17 19:19:56,699 INFO  org.apache.ctakes.ytex.uima.DBCollectionReader  - loading document
with id = {INSTANCE_ID=19}
2017-11-17 19:19:56,701 INFO  org.apache.ctakes.ytex.uima.DBCollectionReader  - loading document
with id = {INSTANCE_ID=20}
2017-11-17 19:19:56,702 INFO  org.apache.ctakes.ytex.uima.DBCollectionReader  - loading document
with id = {INSTANCE_ID=21}
2017-11-17 19:19:56,703 INFO  org.apache.ctakes.ytex.uima.DBCollectionReader  - loading document
with id = {INSTANCE_ID=22}
2017-11-17 19:19:56,704 INFO  org.apache.ctakes.ytex.uima.DBCollectionReader  - loading document
with id = {INSTANCE_ID=23}
2017-11-17 19:19:56,705 INFO  org.apache.ctakes.ytex.uima.DBCollectionReader  - loading document
with id = {INSTANCE_ID=24}
2017-11-17 19:19:56,707 INFO  org.apache.ctakes.ytex.uima.DBCollectionReader  - loading document
with id = {INSTANCE_ID=25}
2017-11-17 19:19:56,708 INFO  org.apache.ctakes.ytex.uima.DBCollectionReader  - loading document
with id = {INSTANCE_ID=26}
2017-11-17 19:19:56,710 INFO  org.apache.ctakes.ytex.uima.DBCollectionReader  - loading document
with id = {INSTANCE_ID=27}
2017-11-17 19:19:56,711 INFO  org.apache.ctakes.ytex.uima.DBCollectionReader  - loading document
with id = {INSTANCE_ID=28}
2017-11-17 19:19:56,712 INFO  org.apache.ctakes.ytex.uima.DBCollectionReader  - loading document
with id = {INSTANCE_ID=29}
2017-11-17 19:19:56,713 INFO  org.apache.ctakes.ytex.uima.DBCollectionReader  - loading document
with id = {INSTANCE_ID=30}
Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 8.953 sec
Running org.apache.ctakes.ytex.uima.annotators.DictionaryLookupAnnotatorTest
2017-11-17 19:19:58,619 INFO  org.apache.ctakes.chunker.ae.Chunker  - Chunker model file:
org/apache/ctakes/chunker/models/chunker-model.zip
2017-11-17 19:20:00,523 INFO  org.apache.ctakes.core.ae.TokenizerAnnotatorPTB  - Initializing
org.apache.ctakes.core.ae.TokenizerAnnotatorPTB
2017-11-17 19:20:00,542 INFO  org.apache.ctakes.contexttokenizer.ae.ContextDependentTokenizerAnnotator
 - Finite state machines loaded.
2017-11-17 19:20:00,548 INFO  org.apache.ctakes.ytex.uima.ApplicationContextHolder  - loading
ytex.properties from: <https://builds.apache.org/job/cTAKES-trunk-Java-1.8/org.apache.ctakes$ctakes-ytex-uima/ws/target/test-classes/org/apache/ctakes/ytex/ytex.properties>
2017-11-17 19:20:00,548 INFO  org.apache.ctakes.ytex.uima.ApplicationContextHolder  - beanRefContext=classpath*:org/apache/ctakes/ytex/uima/beanRefContext.xml
2017-11-17 19:20:00,978 INFO  hsqldb.db.HSQLDB5FCB6B2545.ENGINE  - dataFileCache open start
2017-11-17 19:20:00,989 INFO  hsqldb.db.HSQLDB5FCB6B2545.ENGINE  - dataFileCache open end
2017-11-17 19:20:01,099 INFO  org.apache.ctakes.ytex.uima.resource.InitableJdbcConnectionResourceImpl
 - Connection established to: jdbc:hsqldb:file:///tmp/ctakes-test-hsqldb/ctakes/ctakes;shutdown=true
2017-11-17 19:20:01,102 INFO  org.apache.ctakes.dictionary.lookup.ae.DictionaryLookupAnnotator
 - Parsing descriptor: <https://builds.apache.org/job/cTAKES-trunk-Java-1.8/org.apache.ctakes$ctakes-ytex-uima/ws/target/test-classes/org/apache/ctakes/ytex/dictionary/lookup/LookupDesc_SNOMED.xml>
2017-11-17 19:20:01,191 INFO  org.apache.ctakes.dictionary.lookup.ae.FirstTokenPermLookupInitializerImpl
 - Exclusion tagset loaded: [pp, pdt, prp$, vbn, vbp, wdt, ls, vbz, dt, pos, md, wp, cc, cd,
in, pp$, wrb, vb, prp, ex, vbd, vbg, to, wps, rp]
2017-11-17 19:20:01,228 INFO  org.apache.ctakes.ytex.uima.annotators.SentenceDetector  - [SegmentsToSkip,
SentenceModelFile]
2017-11-17 19:20:01,228 INFO  org.apache.ctakes.ytex.uima.annotators.SentenceDetector  - Sentence
detector model file: org/apache/ctakes/core/sentdetect/sd-med-model.zip
2017-11-17 19:20:01,392 INFO  org.springframework.context.support.ClassPathXmlApplicationContext
 - Refreshing org.springframework.context.support.ClassPathXmlApplicationContext@9573584:
startup date [Fri Nov 17 19:20:01 UTC 2017]; root of context hierarchy
2017-11-17 19:20:01,440 INFO  org.springframework.beans.factory.xml.XmlBeanDefinitionReader
 - Loading XML bean definitions from URL [jar:file:/home/jenkins/jenkins-slave/workspace/cTAKES-trunk-Java-1.8/ctakes-ytex-res/target/ctakes-ytex-res-4.0.1-SNAPSHOT.jar!/org/apache/ctakes/ytex/uima/beanRefContext.xml]
2017-11-17 19:20:01,497 INFO  org.springframework.beans.factory.xml.XmlBeanDefinitionReader
 - Loading XML bean definitions from URL [file:/home/jenkins/jenkins-slave/workspace/cTAKES-trunk-Java-1.8/ctakes-ytex-res/src/main/resources/org/apache/ctakes/ytex/uima/beanRefContext.xml]
2017-11-17 19:20:01,508 INFO  org.springframework.beans.factory.support.DefaultListableBeanFactory
 - Overriding bean definition for bean 'ytexApplicationContext': replacing [Generic bean:
class [org.springframework.context.support.ClassPathXmlApplicationContext]; scope=; abstract=false;
lazyInit=false; autowireMode=0; dependencyCheck=0; autowireCandidate=true; primary=false;
factoryBeanName=null; factoryMethodName=null; initMethodName=null; destroyMethodName=null;
defined in URL [jar:file:/home/jenkins/jenkins-slave/workspace/cTAKES-trunk-Java-1.8/ctakes-ytex-res/target/ctakes-ytex-res-4.0.1-SNAPSHOT.jar!/org/apache/ctakes/ytex/uima/beanRefContext.xml]]
with [Generic bean: class [org.springframework.context.support.ClassPathXmlApplicationContext];
scope=; abstract=false; lazyInit=false; autowireMode=0; dependencyCheck=0; autowireCandidate=true;
primary=false; factoryBeanName=null; factoryMethodName=null; initMethodName=null; destroyMethodName=null;
defined in URL [file:/home/jenkins/jenkins-slave/workspace/cTAKES-trunk-Java-1.8/ctakes-ytex-res/src/main/resources/org/apache/ctakes/ytex/uima/beanRefContext.xml]]
2017-11-17 19:20:01,535 INFO  org.springframework.beans.factory.support.DefaultListableBeanFactory
 - Pre-instantiating singletons in org.springframework.beans.factory.support.DefaultListableBeanFactory@4c51cf28:
defining beans [ytexApplicationContext]; root of factory hierarchy
2017-11-17 19:20:01,594 INFO  org.springframework.context.support.ClassPathXmlApplicationContext
 - Refreshing org.springframework.context.support.ClassPathXmlApplicationContext@ff684e1:
startup date [Fri Nov 17 19:20:01 UTC 2017]; root of context hierarchy
2017-11-17 19:20:01,597 INFO  org.springframework.beans.factory.xml.XmlBeanDefinitionReader
 - Loading XML bean definitions from class path resource [org/apache/ctakes/ytex/beans-datasource.xml]
2017-11-17 19:20:03,479 INFO  org.springframework.beans.factory.xml.XmlBeanDefinitionReader
 - Loading XML bean definitions from class path resource [org/apache/ctakes/ytex/beans-kernel.xml]
2017-11-17 19:20:03,597 INFO  org.springframework.beans.factory.xml.XmlBeanDefinitionReader
 - Loading XML bean definitions from class path resource [org/apache/ctakes/ytex/beans-kernel-sim.xml]
2017-11-17 19:20:03,615 INFO  org.springframework.beans.factory.xml.XmlBeanDefinitionReader
 - Loading XML bean definitions from class path resource [org/apache/ctakes/ytex/uima/beans-uima.hbm.xml]
2017-11-17 19:20:03,654 INFO  org.springframework.beans.factory.xml.XmlBeanDefinitionReader
 - Loading XML bean definitions from class path resource [org/apache/ctakes/ytex/uima/beans-uima-dao.xml]
2017-11-17 19:20:03,698 INFO  org.springframework.beans.factory.xml.XmlBeanDefinitionReader
 - Loading XML bean definitions from class path resource [org/apache/ctakes/ytex/uima/beans-uima-mapper.xml]
2017-11-17 19:20:03,721 INFO  org.springframework.beans.factory.support.DefaultListableBeanFactory
 - Overriding bean definition for bean 'mapperOperation': replacing [Root bean: class [org.springframework.aop.aspectj.AspectJExpressionPointcut];
scope=prototype; abstract=false; lazyInit=false; autowireMode=0; dependencyCheck=0; autowireCandidate=true;
primary=false; factoryBeanName=null; factoryMethodName=null; initMethodName=null; destroyMethodName=null]
with [Root bean: class [org.springframework.aop.aspectj.AspectJExpressionPointcut]; scope=prototype;
abstract=false; lazyInit=false; autowireMode=0; dependencyCheck=0; autowireCandidate=true;
primary=false; factoryBeanName=null; factoryMethodName=null; initMethodName=null; destroyMethodName=null]
2017-11-17 19:20:03,849 INFO  org.springframework.beans.factory.config.PropertyPlaceholderConfigurer
 - Loading properties file from class path resource [org/apache/ctakes/ytex/ytex-default.properties]
2017-11-17 19:20:03,850 INFO  org.springframework.beans.factory.config.PropertyPlaceholderConfigurer
 - Loading properties file from class path resource [org/apache/ctakes/ytex/ytex.properties]
2017-11-17 19:20:03,850 INFO  org.springframework.beans.factory.config.PropertyPlaceholderConfigurer
 - Loading properties file from class path resource [org/apache/ctakes/ytex/ytex-umls.properties]
2017-11-17 19:20:03,910 INFO  org.springframework.beans.factory.support.DefaultListableBeanFactory
 - Pre-instantiating singletons in org.springframework.beans.factory.support.DefaultListableBeanFactory@27305e6:
defining beans [org.springframework.beans.factory.config.PropertyPlaceholderConfigurer#0,ytexProperties,hibernateProperties,dataSource,txAdvice,txTemplate,txTemplateNew,transactionManager,org.springframework.aop.config.internalAutoProxyCreator,daoOperation,umlsDaoOperation,exporterOperation,wekaImporter,mapperOperation,treeOperation,utilOperation,corpusEvaluatorOperation,org.springframework.aop.support.DefaultBeanFactoryPointcutAdvisor#0,org.springframework.aop.support.DefaultBeanFactoryPointcutAdvisor#1,org.springframework.aop.support.DefaultBeanFactoryPointcutAdvisor#2,org.springframework.aop.support.DefaultBeanFactoryPointcutAdvisor#3,org.springframework.aop.support.DefaultBeanFactoryPointcutAdvisor#4,org.springframework.aop.support.DefaultBeanFactoryPointcutAdvisor#5,org.springframework.aop.support.DefaultBeanFactoryPointcutAdvisor#6,org.springframework.aop.support.DefaultBeanFactoryPointcutAdvisor#7,kernelEvaluationDao,conceptDao,umlsDao,wekaBagOfWordsExporter,gramMatrixExporter,documentResultInstanceImporter,wekaResultsImporter,classifierEvaluationDao,libSVMGramMatrixExporter,rGramMatrixExporter,libsvmUtil,instanceTreeBuilder,abstractNormKernel,equalityKernel,atttributeProductKernel,cacheManager,abstractCorpusKernelEvaluator,foldGenerator,kernelUtil,baseClassifierEvaluationParser,semiLEvaluationParser,libSVMParser,svmLightParser,svmlinParser,ClassifierEvaluationImporter,sparseDataExporter,sparseDataFormatterFactory,svmLightFormatterFactory,libSVMFormatterFactory,svmLinFormatterFactory,sgtFormatterFactory,sparseMatrixFormatterFactory,semiLFormatterFactory,wekaFormatterFactory,instanceDataExporter,infogainAttributeEval,rankerSearch,infogainAttributeSelection,wekaAttributeEvaluator,infoContentEvaluator,intrinsicInfoContentEvaluator,imputedFeatureEvaluator,cytoscapeHelper,abstractKernelCacheAdvice,pageRankService,conceptSimilarityService,abstractConceptKernel,abstractLinKernel,abstractSemanticSimKernel,mainSuiSemanticTypeKernel,tuiSemanticTypeKernel,wordSenseDisambiguator,sessionFactory,ytexDaoOperation,org.springframework.aop.support.DefaultBeanFactoryPointcutAdvisor#8,documentDao,namedEntityRegexDao,segmentRegexDao,org.springframework.aop.support.DefaultBeanFactoryPointcutAdvisor#9,ISO8601Converter,documentMapperService];
root of factory hierarchy
2017-11-17 19:20:03,964 INFO  org.springframework.beans.factory.config.PropertiesFactoryBean
 - Loading properties file from class path resource [org/apache/ctakes/ytex/ytex.properties]
2017-11-17 19:20:04,697 INFO  org.hibernate.annotations.common.Version  - HCANN000001: Hibernate
Commons Annotations {4.0.2.Final}
2017-11-17 19:20:04,706 INFO  org.hibernate.Version  - HHH000412: Hibernate Core {4.2.6.Final}
2017-11-17 19:20:04,709 INFO  org.hibernate.cfg.Environment  - HHH000206: hibernate.properties
not found
2017-11-17 19:20:04,711 INFO  org.hibernate.cfg.Environment  - HHH000021: Bytecode provider
name : javassist
2017-11-17 19:20:05,035 INFO  org.hibernate.dialect.Dialect  - HHH000400: Using dialect: org.hibernate.dialect.HSQLDialect
2017-11-17 19:20:05,173 WARN  org.hibernate.mapping.RootClass  - HHH000038: Composite-id class
does not override equals(): org.apache.ctakes.ytex.uima.model.AnnotationContainmentLink
2017-11-17 19:20:05,173 WARN  org.hibernate.mapping.RootClass  - HHH000039: Composite-id class
does not override hashCode(): org.apache.ctakes.ytex.uima.model.AnnotationContainmentLink
2017-11-17 19:20:05,179 INFO  org.hibernate.engine.transaction.internal.TransactionFactoryInitiator
 - HHH000399: Using default transaction strategy (direct JDBC transactions)
2017-11-17 19:20:05,186 INFO  org.hibernate.hql.internal.ast.ASTQueryTranslatorFactory  -
HHH000397: Using ASTQueryTranslatorFactory
2017-11-17 19:20:05,357 INFO  org.hibernate.cache.spi.UpdateTimestampsCache  - HHH000250:
Starting update timestamps cache at region: org.hibernate.cache.spi.UpdateTimestampsCache
2017-11-17 19:20:05,364 INFO  org.hibernate.cache.internal.StandardQueryCache  - HHH000248:
Starting query cache at region: org.hibernate.cache.internal.StandardQueryCache
2017-11-17 19:20:05,381 INFO  org.hibernate.id.enhanced.TableGenerator  - HHH000398: Explicit
segment value for id generator [PUBLIC.hibernate_sequences.sequence_name] suggested; using
default [default]
2017-11-17 19:20:05,638 WARN  org.hibernate.cache.ehcache.AbstractEhcacheRegionFactory  -
HHH020003: Could not find a specific ehcache configuration for cache named [org.apache.ctakes.ytex.uima.model.UimaType];
using defaults.
2017-11-17 19:20:05,641 WARN  org.hibernate.cache.ehcache.internal.strategy.EhcacheAccessStrategyFactoryImpl
 - HHH020007: read-only cache configured for mutable entity [org.apache.ctakes.ytex.uima.model.UimaType]
2017-11-17 19:20:07,065 INFO  org.springframework.orm.hibernate4.HibernateTransactionManager
 - Using DataSource [org.apache.commons.dbcp.BasicDataSource@76889e60] of Hibernate SessionFactory
for HibernateTransactionManager
2017-11-17 19:20:07,558 INFO  org.springframework.cache.ehcache.EhCacheManagerFactoryBean
 - Initializing EHCache CacheManager
2017-11-17 19:20:07,568 WARN  net.sf.ehcache.CacheManager  - Creating a new instance of CacheManager
using the diskStorePath "/tmp" which is already used by an existing CacheManager.
The source of the configuration was net.sf.ehcache.config.generator.ConfigurationSource$InputStreamConfigurationSource@24db6ce.
The diskStore path for this CacheManager will be set to /tmp/ehcache_auto_created_1510946407568.
To avoid this warning consider using the CacheManager factory methods to create a singleton
CacheManager or specifying a separate ehcache configuration (ehcache.xml) for each CacheManager
instance.
2017-11-17 19:20:08,037 INFO  org.apache.ctakes.ytex.kernel.metric.ConceptSimilarityServiceImpl
 - begin initialization for concept graph: sct-rxnorm
2017-11-17 19:20:08,145 INFO  org.apache.ctakes.ytex.kernel.dao.ConceptDaoImpl  - could not
load conceptGraph from classpath, attempt to load from: <https://builds.apache.org/job/cTAKES-trunk-Java-1.8/org.apache.ctakes$ctakes-ytex-uima/ws/target/test-classes/org/apache/ctakes/ytex/conceptGraph/sct-rxnorm.gz>
2017-11-17 19:20:08,145 INFO  org.apache.ctakes.ytex.kernel.dao.ConceptDaoImpl  - <https://builds.apache.org/job/cTAKES-trunk-Java-1.8/org.apache.ctakes$ctakes-ytex-uima/ws/target/test-classes/org/apache/ctakes/ytex/conceptGraph/sct-rxnorm.gz>
not found, cannot load concept graph
2017-11-17 19:20:08,145 INFO  org.apache.ctakes.ytex.kernel.dao.ConceptDaoImpl  - could not
load conceptGraph: sct-rxnorm
2017-11-17 19:20:08,189 WARN  org.apache.ctakes.ytex.kernel.metric.ConceptSimilarityServiceImpl
 - concept graph null, name: sct-rxnorm
2017-11-17 19:20:08,189 INFO  org.apache.ctakes.ytex.kernel.metric.ConceptSimilarityServiceImpl
 - end initialization for concept graph: sct-rxnorm
2017-11-17 19:20:08,633 INFO  org.hibernate.dialect.Dialect  - HHH000400: Using dialect: org.hibernate.dialect.HSQLDialect
2017-11-17 19:20:08,719 INFO  org.apache.ctakes.ytex.uima.mapper.DocumentMapperServiceImpl
 - document table name = PUBLIC.document
2017-11-17 19:20:08,722 DEBUG org.apache.ctakes.ytex.uima.mapper.DocumentMapperServiceImpl
 - docTableCols: {}
2017-11-17 19:20:08,752 WARN  org.apache.ctakes.ytex.uima.annotators.SenseDisambiguatorAnnotator
 - Concept Graph was not loaded - word sense disambiguation disabled
2017-11-17 19:20:08,801 INFO  org.apache.ctakes.postagger.POSTagger  - POS tagger model file:
org/apache/ctakes/postagger/models/mayo-pos.zip
2017-11-17 19:20:09,830 DEBUG org.apache.ctakes.ytex.uima.annotators.SegmentRegexAnnotator
 - segmentsAdded: 0
2017-11-17 19:20:09,834 INFO  org.apache.ctakes.ytex.uima.annotators.SentenceDetector  - Starting
processing.
2017-11-17 19:20:09,842 INFO  org.apache.ctakes.core.ae.TokenizerAnnotatorPTB  - process(JCas)
in org.apache.ctakes.core.ae.TokenizerAnnotatorPTB
2017-11-17 19:20:09,866 INFO  org.apache.ctakes.contexttokenizer.ae.ContextDependentTokenizerAnnotator
 - process(JCas)
2017-11-17 19:20:09,882 INFO  org.apache.ctakes.postagger.POSTagger  - process(JCas)
2017-11-17 19:20:09,898 INFO  org.apache.ctakes.chunker.ae.Chunker  -  process(JCas)
2017-11-17 19:20:09,922 INFO  org.apache.ctakes.chunker.ae.adjuster.ChunkAdjuster  -  process(JCas)
2017-11-17 19:20:09,925 INFO  org.apache.ctakes.chunker.ae.adjuster.ChunkAdjuster  -  process(JCas)
2017-11-17 19:20:09,928 INFO  org.apache.ctakes.core.ae.CopyAnnotator  - process(JCas)
2017-11-17 19:20:09,930 INFO  org.apache.ctakes.core.ae.OverlapAnnotator  - process(JCas)
2017-11-17 19:20:09,933 INFO  org.apache.ctakes.dictionary.lookup.ae.DictionaryLookupAnnotator
 - process(JCas)
NP [Dr. Doolitle]
VP [asked]
NP [patient]
VP [
to take]
O [
]
NP [a deep breath
]
NP [
]
PP [
]
O [and]
ADJP [exhale]
ADVP [slowly]
NP [Patient]
VP [coughed]
O [and]
VP [complained]
PP [of]
NP [abdominal pain]
NP [Patient]
VP [was administered]
NP [acetaminophen]
LookupWindowAnnotation [Dr. Doolitle]
LookupWindowAnnotation [patient]
LookupWindowAnnotation [a deep breath
]
LookupWindowAnnotation [Patient]
LookupWindowAnnotation [abdominal pain]
LookupWindowAnnotation [Patient]
LookupWindowAnnotation [acetaminophen]
EntityMention [abdominal]
EntityMention [pain]
EntityMention [acetaminophen]
2017-11-17 19:20:10,239 INFO  org.apache.ctakes.ytex.uima.resource.InitableJdbcConnectionResourceImpl
 - Connection established to: jdbc:hsqldb:file:///tmp/ctakes-test-hsqldb/ctakes/ctakes;shutdown=true
2017-11-17 19:20:10,240 INFO  org.apache.ctakes.dictionary.lookup.ae.DictionaryLookupAnnotator
 - Parsing descriptor: <https://builds.apache.org/job/cTAKES-trunk-Java-1.8/org.apache.ctakes$ctakes-ytex-uima/ws/target/test-classes/org/apache/ctakes/ytex/dictionary/lookup/LookupDesc_SNOMED.xml>
2017-11-17 19:20:10,243 INFO  org.apache.ctakes.dictionary.lookup.ae.FirstTokenPermLookupInitializerImpl
 - Exclusion tagset loaded: [pp, pdt, prp$, vbn, vbp, wdt, ls, vbz, dt, pos, md, wp, cc, cd,
in, pp$, wrb, vb, prp, ex, vbd, vbg, to, wps, rp]
2017-11-17 19:20:10,283 INFO  org.apache.ctakes.dictionary.lookup.ae.DictionaryLookupAnnotator
 - process(JCas)
EntityMention [acetaminophen]
Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 12.965 sec
Running org.apache.ctakes.ytex.tools.SetupAuiFirstWordTest
2017-11-17 19:20:10,978 WARN  org.apache.ctakes.ytex.tools.SetupAuiFirstWord  - classpath:ctakes-lvg/desc/analysis_engine/LvgAnnotator.xml
not available, attempting to load from file system
2017-11-17 19:20:11,193 INFO  org.apache.ctakes.ytex.tools.SetupAuiFirstWord  - loading lvg.properties
from:file:/home/jenkins/jenkins-slave/maven-repositories/0/net/sourceforge/ctakesresources/ctakes-resources-lvg2008/4.0.0/ctakes-resources-lvg2008-4.0.0.jar!/org/apache/ctakes/lvg/data/config/lvg.properties
** Configuration Error: <https://builds.apache.org/job/cTAKES-trunk-Java-1.8/org.apache.ctakes$ctakes-ytex-uima/ws/file>:/home/jenkins/jenkins-slave/maven-repositories/0/net/sourceforge/ctakesresources/ctakes-resources-lvg2008/4.0.0/ctakes-resources-lvg2008-4.0.0.jar!/org/apache/ctakes/lvg/file:/home/jenkins/jenkins-slave/maven-repositories/0/net/sourceforge/ctakesresources/ctakes-resources-lvg2008/4.0.0/ctakes-resources-lvg2008-4.0.0.jar!/org/apache/ctakes/lvg/data/config/lvg.properties
(No such file or directory)
** Error: problem of opening/reading config file: '<https://builds.apache.org/job/cTAKES-trunk-Java-1.8/org.apache.ctakes$ctakes-ytex-uima/ws/file>:/home/jenkins/jenkins-slave/maven-repositories/0/net/sourceforge/ctakesresources/ctakes-resources-lvg2008/4.0.0/ctakes-resources-lvg2008-4.0.0.jar!/org/apache/ctakes/lvg//file:/home/jenkins/jenkins-slave/maven-repositories/0/net/sourceforge/ctakesresources/ctakes-resources-lvg2008/4.0.0/ctakes-resources-lvg2008-4.0.0.jar!/org/apache/ctakes/lvg/data/config/lvg.properties'.
Use -x option to specify the config file path.
UmlsAuiFirstWord [aui=1tok, fword=heart]
Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.471 sec

Results :

Failed tests:   testParseDate(org.apache.ctakes.ytex.uima.annotators.DateAnnotatorTest)

Tests run: 13, Failures: 1, Errors: 0, Skipped: 0

[JENKINS] Recording test results
[JENKINS] Archiving disabled


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