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From "Nathan Salmon (JIRA)" <j...@apache.org>
Subject [jira] [Commented] (CTAKES-334) GramMatrixExporterImpl initialization failed
Date Tue, 10 Oct 2017 18:01:00 GMT

    [ https://issues.apache.org/jira/browse/CTAKES-334?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=16199092#comment-16199092
] 

Nathan Salmon commented on CTAKES-334:
--------------------------------------

Confirmed that trunk build is broken due to this issue and this issue alone.  Does someone
just need to own this and submit a PR?  Happy to drive it through if there are no takers.

> GramMatrixExporterImpl initialization failed
> --------------------------------------------
>
>                 Key: CTAKES-334
>                 URL: https://issues.apache.org/jira/browse/CTAKES-334
>             Project: cTAKES
>          Issue Type: Bug
>          Components: ctakes-ytex
>    Affects Versions: 3.2.0, 3.1.1
>            Reporter: vijay
>             Fix For: 3.2.1
>
>         Attachments: ctakes-334.patch
>
>
> Failed to obtain BeanInfo for class [org.apache.ctakes.ytex.weka.GramMatrixExporterImpl];
nested exception is java.beans.IntrospectionException: type mismatch between read and write
methods
> {code}
>  Exception in thread "main" java.lang.ExceptionInInitializerError
>      [java]     at org.apache.ctakes.ytex.tools.SetupAuiFirstWord.setupAuiFirstWord(SetupAuiFirstWord.java:190)
>      [java]     at org.apache.ctakes.ytex.tools.SetupAuiFirstWord.main(SetupAuiFirstWord.java:186)
>      [java] Caused by: org.springframework.beans.factory.access.BootstrapException: Unable
to initialize group definition. Group resource name [classpath*:org/apache/ctakes/ytex/kernelBeanRefContext.xml],
factory key [kernelApplicationContext]; nested exception is org.springframework.beans.factory.BeanCreationException:
Error creating bean with name 'kernelApplicationContext' defined in URL [jar:file:/media/nino/Dati/apache-ctakes-3.2.0/lib/ctakes-ytex-web-3.2.0-classes.jar!/org/apache/ctakes/ytex/kernelBeanRefContext.xml]:
Instantiation of bean failed; nested exception is org.springframework.beans.BeanInstantiationException:
Could not instantiate bean class [org.springframework.context.support.ClassPathXmlApplicationContext]:
Constructor threw exception; nested exception is org.springframework.beans.factory.BeanCreationException:
Error creating bean with name 'gramMatrixExporter' defined in class path resource [org/apache/ctakes/ytex/beans-kernel.xml]:
Initialization of bean failed; nested exception is org.springframework.beans.FatalBeanException:
Failed to obtain BeanInfo for class [org.apache.ctakes.ytex.weka.GramMatrixExporterImpl];
nested exception is java.beans.IntrospectionException: type mismatch between read and write
methods
>      [java]     at org.springframework.beans.factory.access.SingletonBeanFactoryLocator.useBeanFactory(SingletonBeanFactoryLocator.java:386)
>      [java]     at org.apache.ctakes.ytex.kernel.KernelContextHolder.<clinit>(KernelContextHolder.java:28)
>      [java]     ... 2 more
>      [java] Caused by: org.springframework.beans.factory.BeanCreationException: Error
creating bean with name 'kernelApplicationContext' defined in URL [jar:file:/media/nino/Dati/apache-ctakes-3.2.0/lib/ctakes-ytex-web-3.2.0-classes.jar!/org/apache/ctakes/ytex/kernelBeanRefContext.xml]:
Instantiation of bean failed; nested exception is org.springframework.beans.BeanInstantiationException:
Could not instantiate bean class [org.springframework.context.support.ClassPathXmlApplicationContext]:
Constructor threw exception; nested exception is org.springframework.beans.factory.BeanCreationException:
Error creating bean with name 'gramMatrixExporter' defined in class path resource [org/apache/ctakes/ytex/beans-kernel.xml]:
Initialization of bean failed; nested exception is org.springframework.beans.FatalBeanException:
Failed to obtain BeanInfo for class [org.apache.ctakes.ytex.weka.GramMatrixExporterImpl];
nested exception is java.beans.IntrospectionException: type mismatch between read and write
methods
>      [java]     at org.springframework.beans.factory.support.ConstructorResolver.autowireConstructor(ConstructorResolver.java:288)
>      [java]     at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.autowireConstructor(AbstractAutowireCapableBeanFactory.java:1035)
>      [java]     at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBeanInstance(AbstractAutowireCapableBeanFactory.java:939)
>      [java]     at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:485)
>      [java]     at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:456)
>      [java]     at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:294)
>      [java]     at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:225)
>      [java]     at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:291)
>      [java]     at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:193)
>      [java]     at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:609)
>      [java]     at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:918)
>      [java]     at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:469)
>      [java]     at org.springframework.context.access.ContextSingletonBeanFactoryLocator.initializeDefinition(ContextSingletonBeanFactoryLocator.java:143)
>      [java]     at org.springframework.beans.factory.access.SingletonBeanFactoryLocator.useBeanFactory(SingletonBeanFactoryLocator.java:381)
>      [java]     ... 3 more
>      [java] Caused by: org.springframework.beans.BeanInstantiationException: Could not
instantiate bean class [org.springframework.context.support.ClassPathXmlApplicationContext]:
Constructor threw exception; nested exception is org.springframework.beans.factory.BeanCreationException:
Error creating bean with name 'gramMatrixExporter' defined in class path resource [org/apache/ctakes/ytex/beans-kernel.xml]:
Initialization of bean failed; nested exception is org.springframework.beans.FatalBeanException:
Failed to obtain BeanInfo for class [org.apache.ctakes.ytex.weka.GramMatrixExporterImpl];
nested exception is java.beans.IntrospectionException: type mismatch between read and write
methods
>      [java]     at org.springframework.beans.BeanUtils.instantiateClass(BeanUtils.java:162)
>      [java]     at org.springframework.beans.factory.support.SimpleInstantiationStrategy.instantiate(SimpleInstantiationStrategy.java:110)
>      [java]     at org.springframework.beans.factory.support.ConstructorResolver.autowireConstructor(ConstructorResolver.java:280)
>      [java]     ... 16 more
>      [java] Caused by: org.springframework.beans.factory.BeanCreationException: Error
creating bean with name 'gramMatrixExporter' defined in class path resource [org/apache/ctakes/ytex/beans-kernel.xml]:
Initialization of bean failed; nested exception is org.springframework.beans.FatalBeanException:
Failed to obtain BeanInfo for class [org.apache.ctakes.ytex.weka.GramMatrixExporterImpl];
nested exception is java.beans.IntrospectionException: type mismatch between read and write
methods
>      [java]     at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:527)
>      [java]     at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:456)
>      [java]     at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:294)
>      [java]     at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:225)
>      [java]     at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:291)
>      [java]     at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:193)
>      [java]     at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:609)
>      [java]     at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:918)
>      [java]     at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:469)
>      [java]     at org.springframework.context.support.ClassPathXmlApplicationContext.<init>(ClassPathXmlApplicationContext.java:139)
>      [java]     at org.springframework.context.support.ClassPathXmlApplicationContext.<init>(ClassPathXmlApplicationContext.java:93)
>      [java]     at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
>      [java]     at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
>      [java]     at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
>      [java]     at java.lang.reflect.Constructor.newInstance(Constructor.java:408)
>      [java]     at org.springframework.beans.BeanUtils.instantiateClass(BeanUtils.java:147)
>      [java]     ... 18 more
>      [java] Caused by: org.springframework.beans.FatalBeanException: Failed to obtain
BeanInfo for class [org.apache.ctakes.ytex.weka.GramMatrixExporterImpl]; nested exception
is java.beans.IntrospectionException: type mismatch between read and write methods
>      [java]     at org.springframework.beans.CachedIntrospectionResults.<init>(CachedIntrospectionResults.java:262)
>      [java]     at org.springframework.beans.CachedIntrospectionResults.forClass(CachedIntrospectionResults.java:149)
>      [java]     at org.springframework.beans.BeanWrapperImpl.getCachedIntrospectionResults(BeanWrapperImpl.java:324)
>      [java]     at org.springframework.beans.BeanWrapperImpl.getPropertyDescriptors(BeanWrapperImpl.java:331)
>      [java]     at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.filterPropertyDescriptorsForDependencyCheck(AbstractAutowireCapableBeanFactory.java:1242)
>      [java]     at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.populateBean(AbstractAutowireCapableBeanFactory.java:1101)
>      [java]     at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:517)
>      [java]     ... 33 more
>      [java] Caused by: java.beans.IntrospectionException: type mismatch between read
and write methods
>      [java]     at java.beans.PropertyDescriptor.findPropertyType(PropertyDescriptor.java:659)
>      [java]     at java.beans.PropertyDescriptor.setReadMethod(PropertyDescriptor.java:256)
>      [java]     at org.springframework.beans.ExtendedBeanInfo.addOrUpdatePropertyDescriptor(ExtendedBeanInfo.java:282)
>      [java]     at org.springframework.beans.ExtendedBeanInfo.addOrUpdatePropertyDescriptor(ExtendedBeanInfo.java:180)
>      [java]     at org.springframework.beans.ExtendedBeanInfo.<init>(ExtendedBeanInfo.java:100)
>      [java]     at org.springframework.beans.CachedIntrospectionResults.<init>(CachedIntrospectionResults.java:224)
>      [java]     ... 39 more
> {code}



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