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From Apache Jenkins Server <jenk...@builds.apache.org>
Subject Build failed in Jenkins: cTAKES-trunk-Java-1.8 #16
Date Wed, 25 Oct 2017 17:36:29 GMT
See <https://builds.apache.org/job/cTAKES-trunk-Java-1.8/16/display/redirect?page=changes>

Changes:

[seanfinan] Allow comma-separated semantic group codes in blacklist files.

[seanfinan] Change from deprecated FileLocator.locateFile(..) to getFile(..)
Remove use of deprecated getCasInitializer()

[seanfinan] CTAKES-470 : throw exception (and exit) if piper cannot be loaded.  Exceptions
saved to log file.

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[INFO] Quality profile for java: Sonar way
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[INFO] -------------  Scan Apache cTAKES Resources dictionary-lookup-fast-res
[INFO] Base dir: <https://builds.apache.org/job/cTAKES-trunk-Java-1.8/ws/ctakes-dictionary-lookup-fast-res>
[INFO] Working dir: <https://builds.apache.org/job/cTAKES-trunk-Java-1.8/ws/ctakes-dictionary-lookup-fast-res/target/sonar>
[INFO] Source paths: pom.xml
[INFO] Binary dirs: target/classes
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[INFO] -------------  Scan Apache cTAKES
[INFO] Base dir: <https://builds.apache.org/job/cTAKES-trunk-Java-1.8/ws/>
[INFO] Working dir: <https://builds.apache.org/job/cTAKES-trunk-Java-1.8/ws/target/sonar>
[INFO] Source encoding: UTF-8, default locale: en_US
[INFO] Sensor Lines Sensor
[INFO] Sensor Lines Sensor (done) | time=0ms
[INFO] Sensor SCM Sensor
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[INFO] Sensor CPD Block Indexer
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[INFO] Calculating CPD for 1095 files
[INFO] CPD calculation finished
[INFO] Analysis report generated in 1537ms, dir size=18 MB
[INFO] Analysis reports compressed in 3331ms, zip size=7 MB
[INFO] Analysis report uploaded in 2516ms
[INFO] ANALYSIS SUCCESSFUL, you can browse https://builds.apache.org/analysis/dashboard/index/org.apache.ctakes:ctakes
[INFO] Note that you will be able to access the updated dashboard once the server has processed
the submitted analysis report
[INFO] More about the report processing at https://builds.apache.org/analysis/api/ce/task?id=AV9UkK8iiuI1oxQxO_uV
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[INFO] Reactor Summary:
[INFO] 
[INFO] Apache cTAKES ...................................... SUCCESS [05:27 min]
[INFO] ctakes-gui-res ..................................... SUCCESS [01:21 min]
[INFO] Apache cTAKES Resources core ....................... SUCCESS [ 31.716 s]

[INFO] Apache cTAKES common type system ................... SUCCESS [01:18 min]
[INFO] Apache cTAKES utils ................................ SUCCESS [ 42.383 s]
[INFO] Apache cTAKES core ................................. SUCCESS [04:37 min]
[INFO] ctakes-gui ......................................... SUCCESS [01:00 min]
[INFO] Apache cTAKES Resources pos-tagger ................. SUCCESS [01:05 min]
[INFO] Apache cTAKES part-of-speech tagger ................ SUCCESS [01:06 min]
[INFO] Apache cTAKES Resources ctakes-chunker-res ......... SUCCESS [01:02 min]
[INFO] Apache cTAKES chunker .............................. SUCCESS [01:18 min]
[INFO] Apache cTAKES document preprocessor ................ SUCCESS [01:35 min]
[INFO] Apache cTAKES Resources dictionary-lookup .......... SUCCESS [01:21 min]
[INFO] Apache cTAKES dictionary lookup .................... SUCCESS [01:38 min]
[INFO] Apache cTAKES context dependent tokenizer .......... SUCCESS [01:31 min]
[INFO] Apache cTAKES Resources lvg ........................ SUCCESS [02:28 min]
[INFO] Apache cTAKES LVG lexical tools .................... SUCCESS [ 24.022 s]
[INFO] Apache cTAKES Resources ne-contexts ................ SUCCESS [  2.879 s]
[INFO] Apache cTAKES named entity contexts ................ SUCCESS [ 15.925 s]
[INFO] Apache cTAKES Resources constituency-parser ........ SUCCESS [  5.863 s]
[INFO] Apache cTAKES Constituency Parser .................. SUCCESS [  3.790 s]
[INFO] Apache cTAKES Resources coreference ................ SUCCESS [ 15.404 s]
[INFO] Apache cTAKES Resources temporal ................... SUCCESS [  3.212 s]
[INFO] Apache cTAKES Resources relation-extractor ......... SUCCESS [  3.186 s]
[INFO] Apache cTAKES Resources dictionary-lookup-fast-res . SUCCESS [  4.447 s]
[INFO] Apache cTAKES dictionary lookup fast ............... SUCCESS [ 15.289 s]
[INFO] Apache cTAKES Resources assertion .................. SUCCESS [  4.192 s]
[INFO] Apache cTAKES Resources dependency-parser .......... SUCCESS [ 20.509 s]
[INFO] Apache cTAKES Dependency Parser .................... SUCCESS [ 38.110 s]
[INFO] Apache cTAKES Assertion ............................ SUCCESS [  6.139 s]
[INFO] ctakes-clinical-pipeline-res ....................... SUCCESS [  2.530 s]
[INFO] Apache cTAKES ctakes-clinical-pipeline ............. SUCCESS [  6.801 s]
[INFO] Apache cTAKES Relation Extractor ................... SUCCESS [  9.541 s]
[INFO] Apache cTAKES Temporal Information Extraction ...... FAILURE [15:25 min]
[INFO] Apache cTAKES CoReference Resolver ................. SKIPPED
[INFO] Apache cTAKES Resources drug-ner ................... SUCCESS [ 20.107 s]
[INFO] Apache cTAKES Drug NER ............................. SUCCESS [ 46.794 s]
[INFO] Apache cTAKES Resources side-effect ................ SUCCESS [ 31.129 s]
[INFO] Apache cTAKES Side Effects ......................... SUCCESS [ 52.067 s]
[INFO] Apache cTAKES Resources smoking-status ............. SUCCESS [  2.664 s]
[INFO] Apache cTAKES Smoking Status ....................... SUCCESS [  6.534 s]
[INFO] Apache cTAKES Resources assertion-zoner ............ SUCCESS [  2.689 s]
[INFO] Apache cTAKES Assertion's zoner .................... SUCCESS [  3.269 s]
[INFO] ctakes-examples-res ................................ SUCCESS [  2.448 s]
[INFO] ctakes-examples .................................... SKIPPED
[INFO] Apache cTAKES Resources ctakes-ytex-res ............ SUCCESS [  2.397 s]
[INFO] Apache cTAKES YTEX ................................. FAILURE [01:18 min]
[INFO] Apache cTAKES YTEX UIMA ............................ SKIPPED
[INFO] Apache cTAKES YTEX Web ............................. SKIPPED
[INFO] Apache cTAKES Distribution ......................... SKIPPED
[INFO] Apache cTAKES Regression-test ...................... FAILURE [ 23.102 s]
[INFO] Apache cTAKES template filler ...................... SUCCESS [  7.702 s]
[INFO] ------------------------------------------------------------------------
[INFO] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 01:12 h
[INFO] Finished at: 2017-10-25T17:31:23Z
[INFO] Final Memory: 154M/1636M
[INFO] ------------------------------------------------------------------------
[ERROR] Failed to execute goal org.apache.maven.plugins:maven-surefire-plugin:2.12.1:test
(default-test) on project ctakes-temporal: Failure or timeout -> [Help 1]
[ERROR] Failed to execute goal org.apache.maven.plugins:maven-surefire-plugin:2.12.1:test
(surefire-it) on project ctakes-ytex: There are test failures.
[ERROR] 
[ERROR] Please refer to <https://builds.apache.org/job/cTAKES-trunk-Java-1.8/ws/ctakes-ytex/target/surefire-reports>
for the individual test results.
[ERROR] -> [Help 2]
[ERROR] Failed to execute goal org.apache.maven.plugins:maven-surefire-plugin:2.12.1:test
(default-test) on project ctakes-regression-test: There are test failures.
[ERROR] 
[ERROR] Please refer to <https://builds.apache.org/job/cTAKES-trunk-Java-1.8/ws/ctakes-regression-test/target/surefire-reports>
for the individual test results.
[ERROR] -> [Help 2]
[ERROR] 
[ERROR] To see the full stack trace of the errors, re-run Maven with the -e switch.
[ERROR] Re-run Maven using the -X switch to enable full debug logging.
[ERROR] 
[ERROR] For more information about the errors and possible solutions, please read the following
articles:
[ERROR] [Help 1] http://cwiki.apache.org/confluence/display/MAVEN/MojoExecutionException
[ERROR] [Help 2] http://cwiki.apache.org/confluence/display/MAVEN/MojoFailureException
[ERROR] 
[ERROR] After correcting the problems, you can resume the build with the command
[ERROR]   mvn <goals> -rf :ctakes-temporal
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