Return-Path: X-Original-To: archive-asf-public-internal@cust-asf2.ponee.io Delivered-To: archive-asf-public-internal@cust-asf2.ponee.io Received: from cust-asf.ponee.io (cust-asf.ponee.io [163.172.22.183]) by cust-asf2.ponee.io (Postfix) with ESMTP id E4F4C200D04 for ; Mon, 28 Aug 2017 03:33:33 +0200 (CEST) Received: by cust-asf.ponee.io (Postfix) id E196E163B67; Mon, 28 Aug 2017 01:33:33 +0000 (UTC) Delivered-To: archive-asf-public@cust-asf.ponee.io Received: from mail.apache.org (hermes.apache.org [140.211.11.3]) by cust-asf.ponee.io (Postfix) with SMTP id B4C3B163B65 for ; Mon, 28 Aug 2017 03:33:32 +0200 (CEST) Received: (qmail 13436 invoked by uid 500); 28 Aug 2017 01:33:31 -0000 Mailing-List: contact notifications-help@ctakes.apache.org; run by ezmlm Precedence: bulk List-Help: List-Unsubscribe: List-Post: List-Id: Reply-To: dev@ctakes.apache.org Delivered-To: mailing list notifications@ctakes.apache.org Received: (qmail 13421 invoked by uid 99); 28 Aug 2017 01:33:31 -0000 Received: from Unknown (HELO jenkins-master.apache.org) (62.210.60.235) by apache.org (qpsmtpd/0.29) with ESMTP; Mon, 28 Aug 2017 01:33:31 +0000 Received: from jenkins-master (localhost [127.0.0.1]) by jenkins-master.apache.org (ASF Mail Server at jenkins-master.apache.org) with ESMTP id 2C55CA04DE; Mon, 28 Aug 2017 01:33:28 +0000 (UTC) Date: Mon, 28 Aug 2017 01:33:28 +0000 (UTC) From: Apache Jenkins Server To: notifications@ctakes.apache.org, james-masanz@apache.org, sean.finan@tch.harvard.edu, timothy.miller@childrens.harvard.edu Message-ID: <1263534949.2724.1503884008179.JavaMail.jenkins@jenkins-master> In-Reply-To: <954342572.2094.1503693261330.JavaMail.jenkins@jenkins-master> References: <954342572.2094.1503693261330.JavaMail.jenkins@jenkins-master> Subject: Build failed in Jenkins: ctakes-trunk-compiletest #1083 MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 7bit X-Instance-Identity: MIIBIjANBgkqhkiG9w0BAQEFAAOCAQ8AMIIBCgKCAQEAkqVKZPv7YyHBB3FvWfV7XQehwe/Ga3aadzSNknt8g382X3uN8A3SOQ+Ixq9HxS+ZlN6XR4TECySmSRy2JN5Rx8svxAD0TjtSF9LuU98dD+LniNDP7Lq6gvRFuJhbMHoS0nuTizDZLsK4X8TW5MyV9w+jFbdoZfRE5O/Mse0fkOeL5uoIS/3Vvu/W+x9QSjDkB7CaU56bPFlQjqqJBl3Cn9r34CkXQZYnLb/NjW4vcpw0+TgMUAPTIVEr5BTPZRshz19g7huwg3zANT5HBIZnzV4hsVY9w4JHkceFdKi/ibNnjPjsFs9pm0HSGJ/RDxjIvSTYT02eH4+m1RAYaj2E9QIDAQAB X-Jenkins-Job: ctakes-trunk-compiletest X-Jenkins-Result: FAILURE archived-at: Mon, 28 Aug 2017 01:33:34 -0000 See Changes: [seanfinan] Example regex engine to find blood pressure values in vital signs sections [seanfinan] Add new headers, quick and easy ------------------------------------------ [...truncated 813.41 KB...] [INFO] --- jcasgen-maven-plugin:2.9.0:generate (default) @ ctakes-coreference --- [INFO] JCasGen: Found descriptor ' [INFO] JCasGen: Found descriptor ' [INFO] JCasGen: Found descriptor ' [INFO] JCasGen: Found descriptor ' [INFO] JCasGen: Found descriptor ' [INFO] JCasGen: Found descriptor ' [INFO] JCasGen: Found descriptor ' [INFO] JCasGen: Found descriptor ' [INFO] JCasGen: Found descriptor ' [INFO] JCasGen: Found descriptor ' [INFO] JCasGen: Found descriptor ' [INFO] JCasGen: Found descriptor ' [INFO] JCasGen: Limiting generation to descriptors in ' [INFO] JCasGen: Output going to ' [INFO] JCasGen: Reading the XML TAE descriptor, and creating types, for xml input file ' [INFO] JCasGen: Creating: 'org.apache.ctakes.coreference.type.AnaphoricityVecInstance'. [INFO] JCasGen: Creating: 'org.apache.ctakes.coreference.type.AnaphoricityVecInstance_Type'. [INFO] JCasGen: Creating: 'org.apache.ctakes.coreference.type.BinaryRelation'. [INFO] JCasGen: Creating: 'org.apache.ctakes.coreference.type.BinaryRelation_Type'. [INFO] JCasGen: Creating: 'org.apache.ctakes.coreference.type.BooleanLabeledFS'. [INFO] JCasGen: Creating: 'org.apache.ctakes.coreference.type.BooleanLabeledFS_Type'. [INFO] JCasGen: Creating: 'org.apache.ctakes.coreference.type.CollectionRelation'. [INFO] JCasGen: Creating: 'org.apache.ctakes.coreference.type.CollectionRelation_Type'. [INFO] JCasGen: Creating: 'org.apache.ctakes.coreference.type.CoreferenceRelation'. [INFO] JCasGen: Creating: 'org.apache.ctakes.coreference.type.CoreferenceRelation_Type'. [INFO] JCasGen: Creating: 'org.apache.ctakes.coreference.type.DemMarkable'. [INFO] JCasGen: Creating: 'org.apache.ctakes.coreference.type.DemMarkable_Type'. [INFO] JCasGen: Creating: 'org.apache.ctakes.coreference.type.DiscoveryTechnique'. [INFO] JCasGen: Creating: 'org.apache.ctakes.coreference.type.DiscoveryTechnique_Type'. [INFO] JCasGen: Creating: 'org.apache.ctakes.coreference.type.Markable'. [INFO] JCasGen: Creating: 'org.apache.ctakes.coreference.type.Markable_Type'. [INFO] JCasGen: Creating: 'org.apache.ctakes.coreference.type.MarkablePair'. [INFO] JCasGen: Creating: 'org.apache.ctakes.coreference.type.MarkablePair_Type'. [INFO] JCasGen: Creating: 'org.apache.ctakes.coreference.type.MarkablePairSet'. [INFO] JCasGen: Creating: 'org.apache.ctakes.coreference.type.MarkablePairSet_Type'. [INFO] JCasGen: Creating: 'org.apache.ctakes.coreference.type.NEMarkable'. [INFO] JCasGen: Creating: 'org.apache.ctakes.coreference.type.NEMarkable_Type'. [INFO] JCasGen: Creating: 'org.apache.ctakes.coreference.type.NonCoreferenceRelation'. [INFO] JCasGen: Creating: 'org.apache.ctakes.coreference.type.NonCoreferenceRelation_Type'. [INFO] JCasGen: Creating: 'org.apache.ctakes.coreference.type.Pair'. [INFO] JCasGen: Creating: 'org.apache.ctakes.coreference.type.Pair_Type'. [INFO] JCasGen: Creating: 'org.apache.ctakes.coreference.type.PredicateArgRelation'. [INFO] JCasGen: Creating: 'org.apache.ctakes.coreference.type.PredicateArgRelation_Type'. [INFO] JCasGen: Creating: 'org.apache.ctakes.coreference.type.PronounMarkable'. [INFO] JCasGen: Creating: 'org.apache.ctakes.coreference.type.PronounMarkable_Type'. [INFO] JCasGen: Creating: 'org.apache.ctakes.coreference.type.Properties'. [INFO] JCasGen: Creating: 'org.apache.ctakes.coreference.type.Properties_Type'. [INFO] JCasGen: Creating: 'org.apache.ctakes.coreference.type.Relation'. [INFO] JCasGen: Creating: 'org.apache.ctakes.coreference.type.Relation_Type'. [INFO] JCasGen: Creating: 'org.apache.ctakes.coreference.type.RelationArgument'. [INFO] JCasGen: Creating: 'org.apache.ctakes.coreference.type.RelationArgument_Type'. [INFO] JCasGen: Creating: 'org.apache.ctakes.coreference.type.UnrelationArgument'. [INFO] JCasGen: Creating: 'org.apache.ctakes.coreference.type.UnrelationArgument_Type'. [INFO] JCasGen: Creating: 'org.apache.ctakes.coreference.type.VecInstance'. [INFO] JCasGen: Creating: 'org.apache.ctakes.coreference.type.VecInstance_Type'. [INFO] [INFO] --- maven-compiler-plugin:2.4:compile (default-compile) @ ctakes-coreference --- [INFO] Compiling 130 source files to [INFO] ------------------------------------------------------------- [ERROR] COMPILATION ERROR : [INFO] ------------------------------------------------------------- [ERROR] :[46,36] error: cannot find symbol [ERROR] symbol: class ThymePatientViewAnnotator location: package org.apache.ctakes.temporal.ae :[280,37] error: cannot find symbol [ERROR] symbol: variable MAX_DOC_VIEWS location: class EvaluationOfEventCoreference :[413,35] error: cannot find symbol [ERROR] symbol: variable MAX_DOC_VIEWS location: class EvaluationOfEventCoreference :[477,35] error: cannot find symbol [ERROR] symbol: variable MAX_DOC_VIEWS location: class EvaluationOfEventCoreference :[564,66] error: cannot find symbol [ERROR] symbol: class ThymePatientViewAnnotator location: class EvaluationOfEventCoreference :[567,23] error: cannot find symbol [ERROR] symbol: variable MAX_DOC_VIEWS location: class EvaluationOfEventCoreference :[573,21] error: cannot find symbol [ERROR] symbol: method getLinguisticProcessingDescription() location: class EvaluationOfEventCoreference :[575,21] error: cannot find symbol [ERROR] symbol: method getGoldWritingAggregate(String) location: class EvaluationOfEventCoreference :[97,36] [deprecation] locateFile(String) in FileLocator has been deprecated [ERROR] :[169,30] [deprecation] locateFile(String) in FileLocator has been deprecated [ERROR] :[185,30] [deprecation] locateFile(String) in FileLocator has been deprecated [ERROR] :[53,50] [deprecation] locateFile(String) in FileLocator has been deprecated [INFO] 12 errors [INFO] ------------------------------------------------------------- [JENKINS] Archiving disabled [INFO] ------------------------------------------------------------------------ [INFO] Reactor Summary: [INFO] [INFO] Apache cTAKES ..................................... SUCCESS [4.399s] [INFO] ctakes-gui-res .................................... SUCCESS [3.623s] [INFO] Apache cTAKES Resources core ...................... SUCCESS [2.246s] [INFO] Apache cTAKES common type system .................. SUCCESS [8.223s] [INFO] Apache cTAKES utils ............................... SUCCESS [3.315s] [INFO] Apache cTAKES core ................................ SUCCESS [20.282s] [INFO] ctakes-gui ........................................ SUCCESS [4.100s] [INFO] Apache cTAKES Resources pos-tagger ................ SUCCESS [2.246s] [INFO] Apache cTAKES part-of-speech tagger ............... SUCCESS [4.597s] [INFO] Apache cTAKES Resources ctakes-chunker-res ........ SUCCESS [2.251s] [INFO] Apache cTAKES chunker ............................. SUCCESS [3.513s] [INFO] Apache cTAKES document preprocessor ............... SUCCESS [3.677s] [INFO] Apache cTAKES Resources dictionary-lookup ......... SUCCESS [9.927s] [INFO] Apache cTAKES dictionary lookup ................... SUCCESS [5.097s] [INFO] Apache cTAKES context dependent tokenizer ......... SUCCESS [4.794s] [INFO] Apache cTAKES Resources lvg ....................... SUCCESS [23.183s] [INFO] Apache cTAKES LVG lexical tools ................... SUCCESS [4.731s] [INFO] Apache cTAKES Resources ne-contexts ............... SUCCESS [2.207s] [INFO] Apache cTAKES named entity contexts ............... SUCCESS [4.257s] [INFO] Apache cTAKES Resources constituency-parser ....... SUCCESS [2.454s] [INFO] Apache cTAKES Constituency Parser ................. SUCCESS [3.068s] [INFO] Apache cTAKES Resources coreference ............... SUCCESS [2.308s] [INFO] Apache cTAKES Resources temporal .................. SUCCESS [2.214s] [INFO] Apache cTAKES Resources relation-extractor ........ SUCCESS [2.195s] [INFO] Apache cTAKES Resources dictionary-lookup-fast-res SUCCESS [3.232s] [INFO] Apache cTAKES dictionary lookup fast .............. SUCCESS [3.029s] [INFO] Apache cTAKES Resources assertion ................. SUCCESS [2.674s] [INFO] Apache cTAKES Resources dependency-parser ......... SUCCESS [2.663s] [INFO] Apache cTAKES Dependency Parser ................... SUCCESS [36.405s] [INFO] Apache cTAKES Assertion ........................... SUCCESS [4.487s] [INFO] ctakes-clinical-pipeline-res ...................... SUCCESS [2.190s] [INFO] Apache cTAKES ctakes-clinical-pipeline ............ SUCCESS [4.841s] [INFO] Apache cTAKES Relation Extractor .................. SUCCESS [8.728s] [INFO] Apache cTAKES Temporal Information Extraction ..... SUCCESS [1:26.738s] [INFO] Apache cTAKES CoReference Resolver ................ FAILURE [4.474s] [INFO] Apache cTAKES Resources drug-ner .................. SKIPPED [INFO] Apache cTAKES Drug NER ............................ SKIPPED [INFO] Apache cTAKES Resources side-effect ............... SKIPPED [INFO] Apache cTAKES Side Effects ........................ SKIPPED [INFO] Apache cTAKES Resources smoking-status ............ SKIPPED [INFO] Apache cTAKES Smoking Status ...................... SKIPPED [INFO] Apache cTAKES Resources assertion-zoner ........... SKIPPED [INFO] Apache cTAKES Assertion's zoner ................... SKIPPED [INFO] ctakes-examples-res ............................... SKIPPED [INFO] ctakes-examples ................................... SKIPPED [INFO] Apache cTAKES Resources ctakes-ytex-res ........... SKIPPED [INFO] Apache cTAKES YTEX ................................ SKIPPED [INFO] Apache cTAKES YTEX UIMA ........................... SKIPPED [INFO] Apache cTAKES YTEX Web ............................ SKIPPED [INFO] Apache cTAKES Distribution ........................ SKIPPED [INFO] Apache cTAKES Regression-test ..................... SKIPPED [INFO] Apache cTAKES template filler ..................... SKIPPED [INFO] ------------------------------------------------------------------------ [INFO] BUILD FAILURE [INFO] ------------------------------------------------------------------------ [INFO] Total time: 5:29.485s [INFO] Finished at: Mon Aug 28 01:32:36 UTC 2017 [INFO] Final Memory: 78M/679M [INFO] ------------------------------------------------------------------------ [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled Waiting for Jenkins to finish collecting data [ERROR] Failed to execute goal org.apache.maven.plugins:maven-compiler-plugin:2.4:compile (default-compile) on project ctakes-coreference: Compilation failure: Compilation failure: [ERROR] :[46,36] error: cannot find symbol [ERROR] symbol: class ThymePatientViewAnnotator [ERROR] location: package org.apache.ctakes.temporal.ae [ERROR] :[280,37] error: cannot find symbol [ERROR] symbol: variable MAX_DOC_VIEWS [ERROR] location: class EvaluationOfEventCoreference [ERROR] :[413,35] error: cannot find symbol [ERROR] symbol: variable MAX_DOC_VIEWS [ERROR] location: class EvaluationOfEventCoreference [ERROR] :[477,35] error: cannot find symbol [ERROR] symbol: variable MAX_DOC_VIEWS [ERROR] location: class EvaluationOfEventCoreference [ERROR] :[564,66] error: cannot find symbol [ERROR] symbol: class ThymePatientViewAnnotator [ERROR] location: class EvaluationOfEventCoreference [ERROR] :[567,23] error: cannot find symbol [ERROR] symbol: variable MAX_DOC_VIEWS [ERROR] location: class EvaluationOfEventCoreference [ERROR] :[573,21] error: cannot find symbol [ERROR] symbol: method getLinguisticProcessingDescription() [ERROR] location: class EvaluationOfEventCoreference [ERROR] :[575,21] error: cannot find symbol [ERROR] symbol: method getGoldWritingAggregate(String) [ERROR] location: class EvaluationOfEventCoreference [ERROR] :[97,36] [deprecation] locateFile(String) in FileLocator has been deprecated [ERROR] :[169,30] [deprecation] locateFile(String) in FileLocator has been deprecated [ERROR] :[185,30] [deprecation] locateFile(String) in FileLocator has been deprecated [ERROR] :[53,50] [deprecation] locateFile(String) in FileLocator has been deprecated [ERROR] -> [Help 1] [ERROR] [ERROR] To see the full stack trace of the errors, re-run Maven with the -e switch. [ERROR] Re-run Maven using the -X switch to enable full debug logging. [ERROR] [ERROR] For more information about the errors and possible solutions, please read the following articles: [ERROR] [Help 1] http://cwiki.apache.org/confluence/display/MAVEN/MojoFailureException [ERROR] [ERROR] After correcting the problems, you can resume the build with the command [ERROR] mvn -rf :ctakes-coreference Sending e-mails to: notifications@ctakes.apache.org timothy.miller@childrens.harvard.edu channel stopped