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From Apache Jenkins Server <jenk...@builds.apache.org>
Subject Build failed in Jenkins: ctakes-trunk-package » Apache cTAKES YTEX UIMA #534
Date Tue, 28 Mar 2017 11:57:17 GMT
See <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/534/display/redirect>

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[WARNING] <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/src/main/java/org/apache/ctakes/ytex/tools/DBAnnotationViewerMain.java>:[724,16]
[unchecked] unchecked call to add(E) as a member of the raw type ArrayList
[WARNING]   where E is a type-variable:
    E extends Object declared in class ArrayList
<https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/src/main/java/org/apache/ctakes/ytex/tools/DBAnnotationViewerMain.java>:[779,24]
[unchecked] unchecked call to add(E) as a member of the raw type ArrayList
[WARNING]   where E is a type-variable:
    E extends Object declared in class ArrayList
<https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/src/main/java/org/apache/ctakes/ytex/tools/DBAnnotationViewerMain.java>:[782,19]
[unchecked] unchecked call to add(E) as a member of the raw type List
[WARNING]   where E is a type-variable:
    E extends Object declared in interface List
<https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/src/main/java/org/apache/ctakes/ytex/tools/DBAnnotationViewerMain.java>:[783,18]
[unchecked] unchecked call to add(E) as a member of the raw type ArrayList
[WARNING]   where E is a type-variable:
    E extends Object declared in class ArrayList
<https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/src/main/java/org/apache/ctakes/ytex/tools/DBAnnotationViewerMain.java>:[785,20]
[unchecked] unchecked call to add(E) as a member of the raw type ArrayList
[WARNING]   where E is a type-variable:
    E extends Object declared in class ArrayList
<https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/src/main/java/org/apache/ctakes/ytex/tools/DBAnnotationViewerMain.java>:[797,30]
[unchecked] unchecked method invocation: method assignColorsFromList in class CasAnnotationViewer
is applied to given types
[WARNING]   required: List<Color>,List<String>
  found: List,ArrayList
<https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/src/main/java/org/apache/ctakes/ytex/tools/DBAnnotationViewerMain.java>:[797,31]
[unchecked] unchecked conversion
[WARNING]   required: List<Color>
  found:    List
<https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/src/main/java/org/apache/ctakes/ytex/tools/DBAnnotationViewerMain.java>:[797,42]
[unchecked] unchecked conversion
[WARNING]   required: List<String>
  found:    ArrayList
<https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/src/main/java/org/apache/ctakes/ytex/tools/DBAnnotationViewerMain.java>:[798,31]
[unchecked] unchecked method invocation: method assignCheckedFromList in class CasAnnotationViewer
is applied to given types
[WARNING]   required: List<String>
  found: ArrayList
<https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/src/main/java/org/apache/ctakes/ytex/tools/DBAnnotationViewerMain.java>:[798,32]
[unchecked] unchecked conversion
[WARNING]   required: List<String>
  found:    ArrayList
<https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/src/main/java/org/apache/ctakes/ytex/tools/DBAnnotationViewerMain.java>:[800,21]
[unchecked] unchecked call to <T>toArray(T[]) as a member of the raw type ArrayList
[WARNING] 
<https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/src/main/java/org/apache/ctakes/ytex/tools/DBAnnotationViewerMain.java>:[871,38]
[unchecked] unchecked method invocation: method createCas in class CasCreationUtils is applied
to given types
[WARNING]   required: Collection<? extends MetaDataObject>,TypeSystem,Properties
  found: List,TypeSystem,Properties
<https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/src/main/java/org/apache/ctakes/ytex/tools/DBAnnotationViewerMain.java>:[871,50]
[unchecked] unchecked conversion
[INFO] 
[INFO] --- maven-resources-plugin:2.5:testResources (default-testResources) @ ctakes-ytex-uima
---
[debug] execute contextualize
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] Copying 1 resource
[INFO] Copying 3 resources
[INFO] 
[INFO] --- maven-compiler-plugin:2.4:testCompile (default-testCompile) @ ctakes-ytex-uima
---
[INFO] Compiling 11 source files to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/test-classes>
[WARNING] <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/src/test/java/org/apache/ctakes/ytex/uima/annotators/SenseDisambiguatorAnnotatorTest.java>:[87,31]
[unchecked] unchecked method invocation: method createConceptGraph in interface ConceptDao
is applied to given types
[WARNING]   required: String,String,String,boolean,Set<String>
  found: <null>,String,String,boolean,Set
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[unchecked] unchecked conversion
[INFO] 
[INFO] --- maven-surefire-plugin:2.12.1:test (default-test) @ ctakes-ytex-uima ---
[INFO] Tests are skipped.
[INFO] 
[INFO] --- maven-jar-plugin:2.4:jar (default-jar) @ ctakes-ytex-uima ---
[INFO] Building jar: <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/ctakes-ytex-uima-3.2.3-SNAPSHOT.jar>
[INFO] 
[INFO] --- maven-site-plugin:3.1:attach-descriptor (attach-descriptor) @ ctakes-ytex-uima
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[INFO] 
[INFO] --- maven-dependency-plugin:2.8:copy-dependencies (copy-dependencies) @ ctakes-ytex-uima
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[INFO] Copying uimaj-tools-2.9.0.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/uimaj-tools-2.9.0.jar>
[INFO] Copying spring-asm-3.1.2.RELEASE.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/spring-asm-3.1.2.RELEASE.jar>
[INFO] Copying spring-jdbc-3.1.2.RELEASE.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/spring-jdbc-3.1.2.RELEASE.jar>
[INFO] Copying ctakes-core-res-3.2.3-SNAPSHOT.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/ctakes-core-res-3.2.3-SNAPSHOT.jar>
[INFO] Copying aopalliance-1.0.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/aopalliance-1.0.jar>
[INFO] Copying ant-contrib-1.0b3.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/ant-contrib-1.0b3.jar>
[INFO] Copying spring-beans-3.1.2.RELEASE.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/spring-beans-3.1.2.RELEASE.jar>
[INFO] Copying jaxb-impl-2.2.5.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/jaxb-impl-2.2.5.jar>
[INFO] Copying commons-collections-3.0.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/commons-collections-3.0.jar>
[INFO] Copying commons-lang-2.4.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/commons-lang-2.4.jar>
[INFO] Copying cglib-2.2.2.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/cglib-2.2.2.jar>
[INFO] Copying cleartk-ml-2.0.0.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/cleartk-ml-2.0.0.jar>
[INFO] Copying xml-apis-1.0.b2.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/xml-apis-1.0.b2.jar>
[INFO] Copying hibernate-ehcache-4.2.6.Final.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/hibernate-ehcache-4.2.6.Final.jar>
[INFO] Copying findstructapi-0.0.1.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/findstructapi-0.0.1.jar>
[INFO] Copying sqlwrapper-0.0.1.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/sqlwrapper-0.0.1.jar>
[INFO] Copying antlr-2.7.7.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/antlr-2.7.7.jar>
[INFO] Copying commons-pool-1.5.4.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/commons-pool-1.5.4.jar>
[INFO] Copying weka-stable-3.6.10.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/weka-stable-3.6.10.jar>
[INFO] Copying ctakes-resources-orangebook-hsqldb-3.1.3.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/ctakes-resources-orangebook-hsqldb-3.1.3.jar>
[INFO] Copying hibernate-core-4.2.6.Final.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/hibernate-core-4.2.6.Final.jar>
[INFO] Copying jewelcli-0.8.3.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/jewelcli-0.8.3.jar>
[INFO] Copying ctakes-utils-3.2.3-SNAPSHOT.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/ctakes-utils-3.2.3-SNAPSHOT.jar>
[INFO] Copying jcarafe-ext_2.9.1-0.9.8.3.RC4.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/jcarafe.ext-2.9.1.jar>
[INFO] Copying slf4j-api-1.6.1.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/slf4j-api-1.6.1.jar>
[INFO] Copying lvgdist-2016.0.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/lvgdist-2016.0.jar>
[INFO] Copying asm-3.3.1.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/asm-3.3.1.jar>
[INFO] Copying commons-logging-1.1.1.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/commons-logging-1.1.1.jar>
[INFO] Copying slf4j-log4j12-1.6.1.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/slf4j-log4j12-1.6.1.jar>
[INFO] Copying commons-dbcp-1.4.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/commons-dbcp-1.4.jar>
[INFO] Copying ctakes-resources-rxnorm-hsqldb-2011ab-3.1.3.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/ctakes-resources-rxnorm-hsqldb-2011ab-3.1.3.jar>
[INFO] Copying hsqldb-1.8.0.10.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/hsqldb-1.8.0.10.jar>
[INFO] Copying solr-commons-csv-3.5.0.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/solr-commons-csv-3.5.0.jar>
[INFO] Copying libsvm-3.1.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/libsvm-3.1.jar>
[INFO] Copying commons-io-2.0.1.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/commons-io-2.0.1.jar>
[INFO] Copying commons-jxpath-1.3.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/commons-jxpath-1.3.jar>
[INFO] Copying spring-orm-3.1.2.RELEASE.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/spring-orm-3.1.2.RELEASE.jar>
[INFO] Copying ctakes-dictionary-lookup-3.2.3-SNAPSHOT.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/ctakes-dictionary-lookup-3.2.3-SNAPSHOT.jar>
[INFO] Copying spring-tx-3.1.2.RELEASE.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/spring-tx-3.1.2.RELEASE.jar>
[INFO] Copying lucene-core-4.0.0.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/lucene-core-4.0.0.jar>
[INFO] Copying lucene-sandbox-4.0.0.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/lucene-sandbox-4.0.0.jar>
[INFO] Copying dom4j-1.6.1.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/dom4j-1.6.1.jar>
[INFO] Copying uimaj-cpe-2.9.0.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/uimaj-cpe-2.9.0.jar>
[INFO] Copying spring-core-3.1.2.RELEASE.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/spring-core-3.1.2.RELEASE.jar>
[INFO] Copying ctakes-lvg-3.2.3-SNAPSHOT.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/ctakes-lvg-3.2.3-SNAPSHOT.jar>
[INFO] Copying jdom-1.0.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/jdom-1.0.jar>
[INFO] Copying uimaj-document-annotation-2.5.0.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/uimaj-document-annotation-2.5.0.jar>
[INFO] Copying hibernate-commons-annotations-4.0.2.Final.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/hibernate-commons-annotations-4.0.2.Final.jar>
[INFO] Copying jsr305-1.3.9.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/jsr305-1.3.9.jar>
[INFO] Copying ctakes-resources-lvg2008-3.2.1.1.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/ctakes-resources-lvg2008-3.2.1.1.jar>
[INFO] Copying jboss-transaction-api_1.1_spec-1.0.1.Final.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/jboss-transaction-api_1.1_spec-1.0.1.Final.jar>
[INFO] Copying hibernate-jpa-2.0-api-1.0.1.Final.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/hibernate-jpa-2.0-api-1.0.1.Final.jar>
[INFO] Copying opennlp-maxent-3.0.3.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/opennlp-maxent-3.0.3.jar>
[INFO] Copying ant-launcher-1.9.2.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/ant-launcher-1.9.2.jar>
[INFO] Copying guava-10.0.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/guava-10.0.jar>
[INFO] Copying uimafit-core-2.2.0.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/uimafit-core-2.2.0.jar>
[INFO] Copying jdom2-2.0.3.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/jdom2-2.0.3.jar>
[INFO] Copying jVinci-2.9.0.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/jVinci-2.9.0.jar>
[INFO] Copying uimaj-examples-2.9.0.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/uimaj-examples-2.9.0.jar>
[INFO] Copying ctakes-resources-umls2011ab-3.1.3.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/ctakes-resources-umls2011ab-3.1.3.jar>
[INFO] Copying ctakes-type-system-3.2.3-SNAPSHOT.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/ctakes-type-system-3.2.3-SNAPSHOT.jar>
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[INFO] Copying uimaj-core-2.9.0.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/uimaj-core-2.9.0.jar>
[INFO] Copying commons-cli-1.2.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/commons-cli-1.2.jar>
[INFO] Copying spring-context-3.1.2.RELEASE.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/spring-context-3.1.2.RELEASE.jar>
[INFO] Copying ant-1.9.2.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/ant-1.9.2.jar>
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[INFO] Copying log4j-1.2.16.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/log4j-1.2.16.jar>
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[INFO] Copying mysql-connector-java-5.1.26.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/mysql-connector-java-5.1.26.jar>
[INFO] Copying jchronic-0.2.6.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/jchronic-0.2.6.jar>
[INFO] Copying jakarta-regexp-1.4.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/jakarta-regexp-1.4.jar>
[INFO] Copying med-facts-i2b2-1.2-SNAPSHOT.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/medfacts-i2b2-1.2.jar>
[INFO] Copying jcarafe-core_2.9.1-0.9.8.3.RC4.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/jcarafe.core-2.9.1.jar>
[INFO] Copying commons-logging-api-1.1.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/commons-logging-api-1.1.jar>
[INFO] Copying cleartk-util-2.0.0.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/cleartk-util-2.0.0.jar>
[INFO] Copying uimaj-adapter-vinci-2.9.0.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/uimaj-adapter-vinci-2.9.0.jar>
[INFO] Copying ctakes-ytex-res-3.2.3-SNAPSHOT.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/ctakes-ytex-res-3.2.3-SNAPSHOT.jar>
[INFO] Copying aspectjweaver-1.7.3.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/aspectjweaver-1.7.3.jar>
[INFO] Copying spring-expression-3.1.2.RELEASE.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/spring-expression-3.1.2.RELEASE.jar>
[INFO] Copying jboss-logging-3.1.0.GA.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/jboss-logging-3.1.0.GA.jar>
[INFO] Copying ctakes-dictionary-lookup-res-3.2.3-SNAPSHOT.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/ctakes-dictionary-lookup-res-3.2.3-SNAPSHOT.jar>
[INFO] Copying lucene-queryparser-4.0.0.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/lucene-queryparser-4.0.0.jar>
[INFO] Copying java-cup-0.11a.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/java-cup-0.11a.jar>
[INFO] Copying spring-aop-3.1.2.RELEASE.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/spring-aop-3.1.2.RELEASE.jar>
[INFO] Copying lucene-queries-4.0.0.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/lucene-queries-4.0.0.jar>
[INFO] Copying ehcache-core-2.4.6.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/ehcache-core-2.4.6.jar>
[INFO] Copying ctakes-core-3.2.3-SNAPSHOT.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/ctakes-core-3.2.3-SNAPSHOT.jar>
[INFO] Copying jaxb-api-2.2.5.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/jaxb-api-2.2.5.jar>
[INFO] Copying opennlp-tools-1.7.2.jar to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/lib/opennlp-tools-1.7.2.jar>
[INFO] 
[INFO] --- maven-antrun-plugin:1.6:run (generate-test-config) @ ctakes-ytex-uima ---
[INFO] Executing tasks

main:

generateTestYtexProperties:
     [echo] <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/test-classes/org/apache/ctakes/ytex/ytex.properties>
does not exist, generating ytex.properties for hsqldb in /tmp/ctakes-test-hsqldb/ctakes/ctakes
     [copy] Copying 1 file to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/test-classes/org/apache/ctakes/ytex>

templateToConfig.init:

templateToConfig.extractTemplates:

templateToConfig.updateConfig:
     [echo] config.source.dir = <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/../ctakes-ytex-res/src/main/resources>
     [echo] config.generated.dir = <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/test-classes>
     [copy] Copying 6 files to <https://builds.apache.org/job/ctakes-trunk-package/org.apache.ctakes$ctakes-ytex-uima/ws/target/test-classes>

templateToConfig:

deleteTestDb:
   [delete] Deleting directory /tmp/ctakes-test-hsqldb/ctakes

test.setup:

init:

umls.check.mrconso:
     [echo] umls.schema ${db.schema}
     [echo] umls.catalog 
      [sql] Executing commands
      [sql] 1 of 1 SQL statements executed successfully
     [echo] mrconso.out = 0
     [echo] 
   [delete] Deleting: /tmp/mrconso-check.txt
     [echo] mrconso.exists = ${mrconso.exists}

umls.all:
     [echo] mrconso.exists = ${mrconso.exists}

init:

umls.drop.view:
     [echo] drop v_snomed_fword_lookup table

jdbc.sqlcmd:
     [echo] db.schemaPUBLIC
     [echo] umls.schema ${db.schema}
     [echo] umls.catalog 
     [echo] execute ./hsql/./umls/drop_view.sql
     [copy] Copying 1 file to /tmp
     [echo] executing /tmp/ytex355375018.sql
      [sql] Executing resource: /tmp/ytex355375018.sql
      [sql] 3 of 3 SQL statements executed successfully
   [delete] Deleting: /tmp/ytex355375018.sql
   [delete] Deleting: /tmp/ytex2072494679use.sql

init.conn:
     [copy] Copying 1 file to /tmp

umls.create.view:
     [echo] create the v_snomed_fword_lookup table

jdbc.sqlcmd:
     [echo] db.schemaPUBLIC
     [echo] umls.schema ${db.schema}
     [echo] umls.catalog 
     [echo] execute ./hsql/./umls/create_view.sql
     [copy] Copying 1 file to /tmp
     [echo] executing /tmp/ytex2134363557.sql
      [sql] Executing resource: /tmp/ytex2134363557.sql
      [sql] 2 of 2 SQL statements executed successfully
   [delete] Deleting: /tmp/ytex2134363557.sql
   [delete] Deleting: /tmp/ytex851534116use.sql

umls.import.view:
     [echo] import v_snomed_fword_lookup from /home/jenkins/jenkins-slave/workspace/ctakes-trunk-package/ctakes-ytex/scripts/data/umls/v_snomed_fword_lookup.txt.
 Be patient, this can take a while.

jdl:
     [echo] jdl.format /home/jenkins/jenkins-slave/workspace/ctakes-trunk-package/ctakes-ytex/scripts/data/umls/v_snomed_fword_lookup.xml
     [echo] jdl.data /home/jenkins/jenkins-slave/workspace/ctakes-trunk-package/ctakes-ytex/scripts/data/umls/v_snomed_fword_lookup.txt
     [echo] umls.prefix 
     [copy] Copying 1 file to /tmp
     [java] Exception in thread "main" java.lang.NoSuchMethodError: org.hsqldb.DatabaseURL.parseURL(Ljava/lang/String;ZZ)Lorg/hsqldb/persist/HsqlProperties;
     [java] 	at org.hsqldb.jdbc.JDBCDriver.getConnection(Unknown Source)
     [java] 	at org.hsqldb.jdbc.JDBCDriver.connect(Unknown Sou2017-03-28 11:52:15,228 INFO
 org.apache.ctakes.jdl.data.loader.CsvLoader  - delimiter 9 encapsulator 65534
     [java] 2017-03-28 11:52:15,239 INFO  org.apache.ctakes.jdl.data.loader.CsvLoader  - insert
into PUBLIC.v_snomed_fword_lookup (cui,tui,fword,fstem,tok_str,stem_str) values (?,?,?,?,?,?)
     [java] rce)
     [java] 	at java.sql.DriverManager.getConnection(DriverManager.java:664)
     [java] 	at java.sql.DriverManager.getConnection(DriverManager.java:247)
     [java] 	at org.apache.ctakes.jdl.data.base.JdlConnection.openConnection(JdlConnection.java:77)
     [java] 	at org.apache.ctakes.jdl.data.base.JdlConnection.getOpenConnection(JdlConnection.java:93)
     [java] 	at org.apache.ctakes.jdl.data.loader.CsvLoader.dataInsert(CsvLoader.java:133)
     [java] 	at org.apache.ctakes.jdl.AppJdl.execute(AppJdl.java:90)
     [java] 	at org.apache.ctakes.jdl.AppMain.main(AppMain.java:88)

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