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From Apache Jenkins Server <jenk...@builds.apache.org>
Subject Build failed in Jenkins: ctakes-trunk-package #464
Date Thu, 29 Sep 2016 12:36:11 GMT
See <https://builds.apache.org/job/ctakes-trunk-package/464/changes>

Changes:

[seanfinan] -just in case- catches in PrettyTextWriter for string size mismatches
Print all sentences in PropertyTextWriter, including those w/o annotations

------------------------------------------
[...truncated 3526 lines...]
AU        ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/models/mention-cluster/model.jar
A         ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/models/anaphoricity.model
A         ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/models/index_med_5k
A         ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/models/index_med_5k/_3.nrm
AU        ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/models/index_med_5k/_3.fdt
AU        ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/models/index_med_5k/_3.tvd
AU        ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/models/index_med_5k/segments.gen
AU        ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/models/index_med_5k/_3.tis
AU        ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/models/index_med_5k/_3.tvf
A         ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/models/index_med_5k/_3.fnm
AU        ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/models/index_med_5k/_3.fdx
AU        ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/models/index_med_5k/_3.tvx
AU        ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/models/index_med_5k/_3.tii
AU        ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/models/index_med_5k/segments_1
A         ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/models/index_med_5k/_3.frq
A         ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/models/index_med_5k/_3.prx
A         ctakes-coreference-res/src/main/resources/org/apache/ctakes/coreference/cogVeds.txt
A         ctakes-coreference-res/pom.xml
A         ctakes-dependency-parser
A         ctakes-dependency-parser/src
A         ctakes-dependency-parser/src/test
A         ctakes-dependency-parser/src/test/java
A         ctakes-dependency-parser/src/test/java/org
A         ctakes-dependency-parser/src/test/java/org/apache
A         ctakes-dependency-parser/src/test/java/org/apache/ctakes
A         ctakes-dependency-parser/src/test/java/org/apache/ctakes/dependency
A         ctakes-dependency-parser/src/test/java/org/apache/ctakes/dependency/parser
A         ctakes-dependency-parser/src/test/java/org/apache/ctakes/dependency/parser/ae
A         ctakes-dependency-parser/src/test/java/org/apache/ctakes/dependency/parser/ae/util
A         ctakes-dependency-parser/src/test/java/org/apache/ctakes/dependency/parser/ae/util/TestClearNLPAnalysisEngines.java
A         ctakes-dependency-parser/src/main
A         ctakes-dependency-parser/src/main/java
A         ctakes-dependency-parser/src/main/java/org
A         ctakes-dependency-parser/src/main/java/org/apache
A         ctakes-dependency-parser/src/main/java/org/apache/ctakes
A         ctakes-dependency-parser/src/main/java/org/apache/ctakes/dependency
A         ctakes-dependency-parser/src/main/java/org/apache/ctakes/dependency/parser
A         ctakes-dependency-parser/src/main/java/org/apache/ctakes/dependency/parser/util
A         ctakes-dependency-parser/src/main/java/org/apache/ctakes/dependency/parser/util/DependencyUtility.java
A         ctakes-dependency-parser/src/main/java/org/apache/ctakes/dependency/parser/util/AnnotationDepUtils.java
A         ctakes-dependency-parser/src/main/java/org/apache/ctakes/dependency/parser/util/SRLUtility.java
A         ctakes-dependency-parser/src/main/java/org/apache/ctakes/dependency/parser/util/ClearDependencyUtility.java
A         ctakes-dependency-parser/src/main/java/org/apache/ctakes/dependency/parser/util/DependencyRegex.java
A         ctakes-dependency-parser/src/main/java/org/apache/ctakes/dependency/parser/util/Delim.java
A         ctakes-dependency-parser/src/main/java/org/apache/ctakes/dependency/parser/util/DependencyPath.java
A         ctakes-dependency-parser/src/main/java/org/apache/ctakes/dependency/parser/DependencyNodeWriter.java
A         ctakes-dependency-parser/src/main/java/org/apache/ctakes/dependency/parser/cr
A         ctakes-dependency-parser/src/main/java/org/apache/ctakes/dependency/parser/cr/DependencyFileCollectionReader.java
A         ctakes-dependency-parser/src/main/java/org/apache/ctakes/dependency/parser/ae
A         ctakes-dependency-parser/src/main/java/org/apache/ctakes/dependency/parser/ae/ClearNLPDependencyParserAE.java
A         ctakes-dependency-parser/src/main/java/org/apache/ctakes/dependency/parser/ae/ClearNLPSemanticRoleLabelerAE.java
A         ctakes-dependency-parser/src/main/java/org/apache/ctakes/dependency/parser/ae/util
A         ctakes-dependency-parser/src/main/java/org/apache/ctakes/dependency/parser/ae/util/WriteClearNLPDescriptors.java
A         ctakes-dependency-parser/src/main/java/org/apache/ctakes/dependency/parser/ae/util/XMIReader.java
A         ctakes-dependency-parser/src/main/java/META-INF
A         ctakes-dependency-parser/src/main/java/META-INF/org.apache.uima.fit
A         ctakes-dependency-parser/src/main/java/META-INF/org.apache.uima.fit/types.txt
A         ctakes-dependency-parser/pom.xml
A         ctakes-dependency-parser/resources
A         ctakes-dependency-parser/desc
A         ctakes-dependency-parser/desc/cas_consumer
A         ctakes-dependency-parser/desc/cas_consumer/DependencyNodeWriter.xml
A         ctakes-dependency-parser/desc/analysis_engine
A         ctakes-dependency-parser/desc/analysis_engine/ClearNLPSRLPlaintextAggregate.xml
A         ctakes-dependency-parser/desc/analysis_engine/ClearNLPDependencyParserAE.xml
A         ctakes-dependency-parser/desc/analysis_engine/ClearNLPSemanticRoleLabelerAE.xml
A         ctakes-dependency-parser/desc/analysis_engine/ClearNLPSRLTokenizedInfPosAggregate.xml
A         ctakes-dependency-parser/desc/analysis_engine/ClearNLPSRLTokenizedAggregate.xml
A         ctakes-dependency-parser/desc/analysis_engine/LemAssigner.xml
A         ctakes-dependency-parser/desc/analysis_engine/LvgBaseTokenAnnotator.xml
A         ctakes-dependency-parser/desc/analysis_engine/ClearNLPDependencyParserPlaintextAggregate.xml
A         ctakes-dependency-parser/desc/analysis_engine/README.txt
A         ctakes-dependency-parser/desc/analysis_engine/PosAssigner.xml
A         ctakes-dependency-parser/desc/analysis_engine/ClearNLPDependencyParserTokenizedInfPosAggregate.xml
A         ctakes-dependency-parser/desc/analysis_engine/ClearNLPDependencyParserTokenizedAggregate.xml
A         ctakes-dependency-parser/desc/collection_processing_engine
A         ctakes-dependency-parser/desc/collection_processing_engine/ClearTrainerLemTestCPE.xml
A         ctakes-dependency-parser/desc/collection_processing_engine/ClearTrainerPosLemTestCPE.xml
A         ctakes-dependency-parser/desc/collection_processing_engine/ClearTrainerPosTestCPE.xml
A         ctakes-dependency-parser/desc/collection_processing_engine/ClearNLPTestCPE.xml
A         ctakes-dependency-parser/desc/collection_reader
A         ctakes-dependency-parser/desc/collection_reader/DependencyFileCollectionReader.xml
A         ctakes-dependency-parser/LICENSE
A         ctakes-constituency-parser-res
A         ctakes-constituency-parser-res/LICENSE
A         ctakes-constituency-parser-res/src
A         ctakes-constituency-parser-res/src/main
A         ctakes-constituency-parser-res/src/main/resources
A         ctakes-constituency-parser-res/src/main/resources/org
A         ctakes-constituency-parser-res/src/main/resources/org/apache
A         ctakes-constituency-parser-res/src/main/resources/org/apache/ctakes
A         ctakes-constituency-parser-res/src/main/resources/org/apache/ctakes/constituency
A         ctakes-constituency-parser-res/src/main/resources/org/apache/ctakes/constituency/parser
A         ctakes-constituency-parser-res/src/main/resources/org/apache/ctakes/constituency/parser/models
AU        ctakes-constituency-parser-res/src/main/resources/org/apache/ctakes/constituency/parser/models/sharpacq-3.1.bin
AU        ctakes-constituency-parser-res/src/main/resources/org/apache/ctakes/constituency/parser/models/sharpacq-1.5.bin
AU        ctakes-constituency-parser-res/src/main/resources/org/apache/ctakes/constituency/parser/models/thyme.bin
A         ctakes-constituency-parser-res/src/test
A         ctakes-constituency-parser-res/pom.xml
A         ctakes-pos-tagger
A         ctakes-pos-tagger/scripts
A         ctakes-pos-tagger/scripts/java
A         ctakes-pos-tagger/scripts/java/data
A         ctakes-pos-tagger/scripts/java/data/pos
A         ctakes-pos-tagger/scripts/java/data/pos/training
A         ctakes-pos-tagger/scripts/java/data/pos/training/GeniaPosTrainingDataExtractorTests.java
A         ctakes-pos-tagger/scripts/java/data/pos/training/GeniaPosTrainingDataExtractor.java
A         ctakes-pos-tagger/scripts/java/data/pos/dictionary
A         ctakes-pos-tagger/scripts/java/data/pos/dictionary/ListTags.java
A         ctakes-pos-tagger/scripts/perl
A         ctakes-pos-tagger/scripts/perl/trees2opennlppostags.pl
A         ctakes-pos-tagger/src
A         ctakes-pos-tagger/src/test
A         ctakes-pos-tagger/src/test/resources
A         ctakes-pos-tagger/src/test/resources/data
A         ctakes-pos-tagger/src/test/resources/data/unit-test-tags.opennlp.format
A         ctakes-pos-tagger/src/test/resources/data/unit-test-training-data.txt
A         ctakes-pos-tagger/src/test/resources/data/README
A         ctakes-pos-tagger/src/test/resources/data/GENIAcorpus3.02.pos.test.xml
A         ctakes-pos-tagger/src/test/resources/data/output
A         ctakes-pos-tagger/src/test/resources/data/output/unit-test-2lines-tag-dictionary.included.txt
A         ctakes-pos-tagger/src/test/resources/data/unit-test-2lines-training-data.txt
A         ctakes-pos-tagger/src/test/java
A         ctakes-pos-tagger/src/test/java/org
A         ctakes-pos-tagger/src/test/java/org/apache
A         ctakes-pos-tagger/src/test/java/org/apache/ctakes
A         ctakes-pos-tagger/src/test/java/org/apache/ctakes/postagger
A         ctakes-pos-tagger/src/test/java/org/apache/ctakes/postagger/test
A         ctakes-pos-tagger/src/test/java/org/apache/ctakes/postagger/test/CpeTests.java
A         ctakes-pos-tagger/src/test/java/org/apache/ctakes/postagger/test/POSTaggerTests.java
A         ctakes-pos-tagger/src/test/java/org/apache/ctakes/postagger/test/OpenNLPPOSCollectionReaderTests.java
A         ctakes-pos-tagger/src/test/java/org/apache/ctakes/postagger/test/TagDictionaryCreatorTests.java
A         ctakes-pos-tagger/src/main
A         ctakes-pos-tagger/src/main/java
A         ctakes-pos-tagger/src/main/java/org
A         ctakes-pos-tagger/src/main/java/org/apache
A         ctakes-pos-tagger/src/main/java/org/apache/ctakes
A         ctakes-pos-tagger/src/main/java/org/apache/ctakes/postagger
A         ctakes-pos-tagger/src/main/java/org/apache/ctakes/postagger/TagDictionaryCreator.java
A         ctakes-pos-tagger/src/main/java/org/apache/ctakes/postagger/ClearNLPPOSTaggerAE.java
A         ctakes-pos-tagger/src/main/java/org/apache/ctakes/postagger/POSTagger.java
A         ctakes-pos-tagger/src/main/java/org/apache/ctakes/postagger/OpenNLPPOSCollectionReader.java
A         ctakes-pos-tagger/data
A         ctakes-pos-tagger/data/test
A         ctakes-pos-tagger/data/pos
A         ctakes-pos-tagger/data/pos/training
A         ctakes-pos-tagger/data/pos/training/sample
A         ctakes-pos-tagger/data/pos/training/sample/sample-pos-training.txt
A         ctakes-pos-tagger/data/pos/training/genia
A         ctakes-pos-tagger/data/pos/training/ptb
A         ctakes-pos-tagger/data/pos/training/README
A         ctakes-pos-tagger/pom.xml
A         ctakes-pos-tagger/resources
A         ctakes-pos-tagger/resources/launch
AU        ctakes-pos-tagger/resources/launch/UIMA_CPE_GUI--POS_tagger.launch
AU        ctakes-pos-tagger/resources/launch/UIMA_CVD--POS_tagger.launch
AU        ctakes-pos-tagger/resources/launch/POS_taggerTests.launch
A         ctakes-pos-tagger/README
A         ctakes-pos-tagger/desc
A         ctakes-pos-tagger/desc/POSTagger.xml
A         ctakes-pos-tagger/desc/AggregateAE.xml
A         ctakes-pos-tagger/desc/ClearNLPPOSTagger.xml
A         ctakes-pos-tagger/desc/OpenNLPPOSCollectionReader.xml
A         ctakes-pos-tagger/desc/test
A         ctakes-pos-tagger/desc/test/OpenNLPPOSCollectionReader2.xml
A         ctakes-pos-tagger/desc/test/NullAnnotator.xml
A         ctakes-pos-tagger/desc/test/POSTaggerAggregate.xml
A         ctakes-pos-tagger/desc/test/POSTaggerAggregate2.xml
A         ctakes-pos-tagger/desc/test/POSTaggerAggregate3.xml
A         ctakes-pos-tagger/desc/test/POSTagger.xml
A         ctakes-pos-tagger/desc/test/OpenNLPPOSCollectionReader.xml
A         ctakes-pos-tagger/desc/POSTaggerAggregate.xml
A         ctakes-pos-tagger/desc/POSTaggerCPE.xml
A         ctakes-pos-tagger/LICENSE
A         ctakes-relation-extractor-res
A         ctakes-relation-extractor-res/src
A         ctakes-relation-extractor-res/src/test
A         ctakes-relation-extractor-res/src/main
A         ctakes-relation-extractor-res/src/main/resources
A         ctakes-relation-extractor-res/src/main/resources/org
A         ctakes-relation-extractor-res/src/main/resources/org/apache
A         ctakes-relation-extractor-res/src/main/resources/org/apache/ctakes
A         ctakes-relation-extractor-res/src/main/resources/org/apache/ctakes/relationextractor
A         ctakes-relation-extractor-res/src/main/resources/org/apache/ctakes/relationextractor/frags_nolex_args.txt
A         ctakes-relation-extractor-res/src/main/resources/org/apache/ctakes/relationextractor/models
A         ctakes-relation-extractor-res/src/main/resources/org/apache/ctakes/relationextractor/models/modifier_extractor
AU        ctakes-relation-extractor-res/src/main/resources/org/apache/ctakes/relationextractor/models/modifier_extractor/model.jar
A         ctakes-relation-extractor-res/src/main/resources/org/apache/ctakes/relationextractor/models/location_of
AU        ctakes-relation-extractor-res/src/main/resources/org/apache/ctakes/relationextractor/models/location_of/model.jar
A         ctakes-relation-extractor-res/src/main/resources/org/apache/ctakes/relationextractor/models/degree_of
AU        ctakes-relation-extractor-res/src/main/resources/org/apache/ctakes/relationextractor/models/degree_of/model.jar
A         ctakes-relation-extractor-res/pom.xml
A         ctakes-relation-extractor-res/LICENSE
 U        .
At revision 1762760

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java.lang.IllegalArgumentException: /home/jenkins/tools/maven/apache-maven-3.0.5 doesn't have
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	at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145)
	at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615)
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hudson.maven.MavenModule@53b01e96[ctakes-trunk-package/org.apache.ctakes:ctakes-ne-contexts][ctakes-trunk-package/org.apache.ctakes:ctakes-ne-contexts][relativePath:ctakes-ne-contexts],
hudson.maven.MavenModule@2a3e16dd[ctakes-trunk-package/org.apache.ctakes:ctakes-ne-contexts-res][ctakes-trunk-package/org.apache.ctakes:ctakes-ne-contexts-res][relativePath:ctakes-ne-contexts-res],
hudson.maven.MavenModule@6b0434ed[ctakes-trunk-package/org.apache.ctakes:ctakes-pos-tagger][ctakes-trunk-package/org.apache.ctakes:ctakes-pos-tagger][relativePath:ctakes-pos-tagger],
hudson.maven.MavenModule@366e32e0[ctakes-trunk-package/org.apache.ctakes:ctakes-pos-tagger-res][ctakes-trunk-package/org.apache.ctakes:ctakes-pos-tagger-res][relativePath:ctakes-pos-tagger-res],
hudson.maven.MavenModule@65f9de15[ctakes-trunk-package/org.apache.ctakes:ctakes-preprocessor][ctakes-trunk-package/org.apache.ctakes:ctakes-preprocessor][relativePath:ctakes-preprocessor],
hudson.maven.MavenModule@3f2bb489[ctakes-trunk-package/org.apache.ctakes:ctakes-regression-test][ctakes-trunk-package/org.apache.ctakes:ctakes-regression-test][relativePath:ctakes-regression-test],
hudson.maven.MavenModule@75c25cdd[ctakes-trunk-package/org.apache.ctakes:ctakes-relation-extractor][ctakes-trunk-package/org.apache.ctakes:ctakes-relation-extractor][relativePath:ctakes-relation-extractor],
hudson.maven.MavenModule@327c89b7[ctakes-trunk-package/org.apache.ctakes:ctakes-relation-extractor-res][ctakes-trunk-package/org.apache.ctakes:ctakes-relation-extractor-res][relativePath:ctakes-relation-extractor-res],
hudson.maven.MavenModule@195ee09b[ctakes-trunk-package/org.apache.ctakes:ctakes-side-effect][ctakes-trunk-package/org.apache.ctakes:ctakes-side-effect][relativePath:ctakes-side-effect],
hudson.maven.MavenModule@7b3380c5[ctakes-trunk-package/org.apache.ctakes:ctakes-side-effect-res][ctakes-trunk-package/org.apache.ctakes:ctakes-side-effect-res][relativePath:ctakes-side-effect-res],
hudson.maven.MavenModule@1cf01fca[ctakes-trunk-package/org.apache.ctakes:ctakes-smoking-status][ctakes-trunk-package/org.apache.ctakes:ctakes-smoking-status][relativePath:ctakes-smoking-status],
hudson.maven.MavenModule@4a970cd2[ctakes-trunk-package/org.apache.ctakes:ctakes-smoking-status-res][ctakes-trunk-package/org.apache.ctakes:ctakes-smoking-status-res][relativePath:ctakes-smoking-status-res],
hudson.maven.MavenModule@24a37723[ctakes-trunk-package/org.apache.ctakes:ctakes-template-filler][ctakes-trunk-package/org.apache.ctakes:ctakes-template-filler][relativePath:ctakes-template-filler],
hudson.maven.MavenModule@4371feda[ctakes-trunk-package/org.apache.ctakes:ctakes-temporal][ctakes-trunk-package/org.apache.ctakes:ctakes-temporal][relativePath:ctakes-temporal],
hudson.maven.MavenModule@5f63b731[ctakes-trunk-package/org.apache.ctakes:ctakes-temporal-res][ctakes-trunk-package/org.apache.ctakes:ctakes-temporal-res][relativePath:ctakes-temporal-res],
hudson.maven.MavenModule@2de0d193[ctakes-trunk-package/org.apache.ctakes:ctakes-type-system][ctakes-trunk-package/org.apache.ctakes:ctakes-type-system][relativePath:ctakes-type-system],
hudson.maven.MavenModule@1245a163[ctakes-trunk-package/org.apache.ctakes:ctakes-utils][ctakes-trunk-package/org.apache.ctakes:ctakes-utils][relativePath:ctakes-utils],
hudson.maven.MavenModule@5e0e1adf[ctakes-trunk-package/org.apache.ctakes:ctakes-ytex][ctakes-trunk-package/org.apache.ctakes:ctakes-ytex][relativePath:ctakes-ytex],
hudson.maven.MavenModule@1c96f410[ctakes-trunk-package/org.apache.ctakes:ctakes-ytex-res][ctakes-trunk-package/org.apache.ctakes:ctakes-ytex-res][relativePath:ctakes-ytex-res],
hudson.maven.MavenModule@37d1d258[ctakes-trunk-package/org.apache.ctakes:ctakes-ytex-uima][ctakes-trunk-package/org.apache.ctakes:ctakes-ytex-uima][relativePath:ctakes-ytex-uima],
hudson.maven.MavenModule@8202378[ctakes-trunk-package/org.apache.ctakes:ctakes-ytex-web][ctakes-trunk-package/org.apache.ctakes:ctakes-ytex-web][relativePath:ctakes-ytex-web]]
project.getRootModule()=hudson.maven.MavenModule@6537081[ctakes-trunk-package/org.apache.ctakes:ctakes][ctakes-trunk-package/org.apache.ctakes:ctakes][relativePath:]
FATAL: /home/jenkins/tools/maven/apache-maven-3.0.5 doesn't have a 'lib' subdirectory - thus
cannot be a valid maven installation!
java.lang.IllegalArgumentException: /home/jenkins/tools/maven/apache-maven-3.0.5 doesn't have
a 'lib' subdirectory - thus cannot be a valid maven installation!
	at hudson.maven.MavenEmbedderUtils.buildClassRealm(MavenEmbedderUtils.java:83)
	at hudson.maven.MavenEmbedderUtils.getMavenVersion(MavenEmbedderUtils.java:188)
	at hudson.maven.MavenVersionCallable.call(MavenVersionCallable.java:70)
	at hudson.maven.MavenVersionCallable.call(MavenVersionCallable.java:42)
	at hudson.remoting.UserRequest.perform(UserRequest.java:153)
	at hudson.remoting.UserRequest.perform(UserRequest.java:50)
	at hudson.remoting.Request$2.run(Request.java:332)
	at hudson.remoting.InterceptingExecutorService$1.call(InterceptingExecutorService.java:68)
	at java.util.concurrent.FutureTask.run(FutureTask.java:262)
	at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145)
	at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615)
	at java.lang.Thread.run(Thread.java:745)
	at ......remote call to jenkins-test-d4(Native Method)
	at hudson.remoting.Channel.attachCallSiteStackTrace(Channel.java:1416)
	at hudson.remoting.UserResponse.retrieve(UserRequest.java:253)
	at hudson.remoting.Channel.call(Channel.java:781)
	at hudson.FilePath.act(FilePath.java:1102)
	at hudson.maven.MavenModuleSetBuild$MavenModuleSetBuildExecution.doRun(MavenModuleSetBuild.java:629)
	at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:534)
	at hudson.model.Run.execute(Run.java:1741)
	at hudson.maven.MavenModuleSetBuild.run(MavenModuleSetBuild.java:531)
	at hudson.model.ResourceController.execute(ResourceController.java:98)
	at hudson.model.Executor.run(Executor.java:410)

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