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From Apache Jenkins Server <jenk...@builds.apache.org>
Subject Build failed in Jenkins: ctakes-trunk-compiletest » Apache cTAKES Temporal Information Extraction #821
Date Tue, 19 Jul 2016 19:45:15 GMT
See <https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/821/changes>

Changes:

[clin] python scripts that are needed for running keras-based CNN

[clin] Enable Convolutional Neural Network for event-time classification. May need further
debug.

NeuralEventTimeRelationsEvaluation: will evaluate pre-trained embedding features.

NeuralEventTimeRelationsCNNEvaluation: will write sequece of tokens to feed in to the CNN.

Both above evals will evaluate the test instances within the cleartk framework.

[clin] add syntactic embedding features for classic event-event model

[clin] add syntactic features for classic event-time model

[clin] temporally remove confidence score from classification results for CNN implementation

[clin] modify the way to generate embedding features for CNN

[clin] relax the rule for removing non-contains relations

------------------------------------------
[...truncated 573 lines...]
Loading model:
........................................................................................
19 Jul 2016 19:44:24  INFO ContextDependentTokenizerAnnotator - Finite state machines loaded.
19 Jul 2016 19:44:24  INFO SentenceDetector - Sentence detector model file: org/apache/ctakes/core/sentdetect/sd-med-model.zip
19 Jul 2016 19:44:24  INFO LvgCmdApiResourceImpl - Loading NLM Norm and Lvg with config file
= /tmp/lvg.properties
19 Jul 2016 19:44:24  INFO LvgCmdApiResourceImpl -   config file absolute path = /tmp/lvg.properties
19 Jul 2016 19:44:24  INFO LvgCmdApiResourceImpl - cwd = <https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/>
19 Jul 2016 19:44:24  INFO LvgCmdApiResourceImpl - cd <https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/>
Exception: java.io.FileNotFoundException: <https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/misc/stopWords.data>
(No such file or directory)
** Error: problem of opening/reading stop words file: '<https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/misc/stopWords.data'.>
Exception: java.io.FileNotFoundException: <https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/misc/nonInfoWords.data>
(No such file or directory)
** Error: problem of opening/reading non-Info words file: '<https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/misc/nonInfoWords.data'.>
Exception: java.io.FileNotFoundException: <https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/misc/conjunctionWord.data>
(No such file or directory)
** Error: problem of opening/reading conjunction words file: '<https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/misc/conjunctionWord.data'.>
** ERR: problem of opening/reading diacritics file: '<https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/Unicode/diacriticMap.data'.>
Exception: java.io.FileNotFoundException: <https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/Unicode/diacriticMap.data>
(No such file or directory)
Exception: java.io.FileNotFoundException: <https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/Unicode/ligatureMap.data>
(No such file or directory)
** Error: problem of opening/reading ligature file: '<https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/Unicode/ligatureMap.data'.>
** Error: problem of opening/reading symbol synonym file: '<https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/Unicode/synonymMap.data'.>
Exception: java.io.FileNotFoundException: <https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/Unicode/synonymMap.data>
(No such file or directory)
**Error: problem of opening/reading file '<https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/misc/removeS.data'.>
Exception: java.io.FileNotFoundException: <https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/misc/removeS.data>
(No such file or directory)
** Error: problem of opening/reading Unicode symbol file: '<https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/Unicode/symbolMap.data'.>
Exception: java.io.FileNotFoundException: <https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/Unicode/symbolMap.data>
(No such file or directory)
** Error: problem of opening/reading Unicode file: '<https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/Unicode/unicodeMap.data'.>
Exception: java.io.FileNotFoundException: <https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/Unicode/unicodeMap.data>
(No such file or directory)
** Error: problem of opening/reading nonStripMap file: '<https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/Unicode/nonStripMap.data'.>
Exception: java.io.FileNotFoundException: <https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/Unicode/nonStripMap.data>
(No such file or directory)
Exception: java.io.FileNotFoundException: <https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/rules/im.rul>
(No such file or directory)
**Error: problem of opening/reading file '<https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws//data/rules/im.rul'.>
Exception: java.io.FileNotFoundException: <https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/rules/im.rul>
(No such file or directory)
**Error: problem of opening/reading file '<https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws//data/rules/im.rul'.>
Exception: java.io.FileNotFoundException: <https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/rules/dm.rul>
(No such file or directory)
**Error: problem of opening/reading file '<https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws//data/rules/dm.rul'.>
Exception: java.io.FileNotFoundException: <https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/rules/dm.rul>
(No such file or directory)
**Error: problem of opening/reading file '<https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws//data/rules/dm.rul'.>
Exception: java.io.FileNotFoundException: <https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/misc/stopWords.data>
(No such file or directory)
** Error: problem of opening/reading stop words file: '<https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/misc/stopWords.data'.>
Exception: java.io.FileNotFoundException: <https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/misc/nonInfoWords.data>
(No such file or directory)
** Error: problem of opening/reading non-Info words file: '<https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/misc/nonInfoWords.data'.>
Exception: java.io.FileNotFoundException: <https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/misc/conjunctionWord.data>
(No such file or directory)
** Error: problem of opening/reading conjunction words file: '<https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/misc/conjunctionWord.data'.>
** ERR: problem of opening/reading diacritics file: '<https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/Unicode/diacriticMap.data'.>
Exception: java.io.FileNotFoundException: <https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/Unicode/diacriticMap.data>
(No such file or directory)
Exception: java.io.FileNotFoundException: <https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/Unicode/ligatureMap.data>
(No such file or directory)
** Error: problem of opening/reading ligature file: '<https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/Unicode/ligatureMap.data'.>
** Error: problem of opening/reading symbol synonym file: '<https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/Unicode/synonymMap.data'.>
Exception: java.io.FileNotFoundException: <https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/Unicode/synonymMap.data>
(No such file or directory)
**Error: problem of opening/reading file '<https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/misc/removeS.data'.>
Exception: java.io.FileNotFoundException: <https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/misc/removeS.data>
(No such file or directory)
** Error: problem of opening/reading Unicode symbol file: '<https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/Unicode/symbolMap.data'.>
Exception: java.io.FileNotFoundException: <https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/Unicode/symbolMap.data>
(No such file or directory)
** Error: problem of opening/reading Unicode file: '<https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/Unicode/unicodeMap.data'.>
Exception: java.io.FileNotFoundException: <https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/Unicode/unicodeMap.data>
(No such file or directory)
** Error: problem of opening/reading nonStripMap file: '<https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/Unicode/nonStripMap.data'.>
Exception: java.io.FileNotFoundException: <https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/Unicode/nonStripMap.data>
(No such file or directory)
Exception: java.io.FileNotFoundException: <https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/rules/im.rul>
(No such file or directory)
**Error: problem of opening/reading file '<https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws//data/rules/im.rul'.>
Exception: java.io.FileNotFoundException: <https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/rules/im.rul>
(No such file or directory)
**Error: problem of opening/reading file '<https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws//data/rules/im.rul'.>
Exception: java.io.FileNotFoundException: <https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/rules/dm.rul>
(No such file or directory)
**Error: problem of opening/reading file '<https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws//data/rules/dm.rul'.>
Exception: java.io.FileNotFoundException: <https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/rules/dm.rul>
(No such file or directory)
**Error: problem of opening/reading file '<https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws//data/rules/dm.rul'.>
19 Jul 2016 19:44:24  INFO LvgCmdApiResourceImpl - cd <https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/>
19 Jul 2016 19:44:24  INFO TokenizerAnnotatorPTB - Initializing org.apache.ctakes.core.ae.TokenizerAnnotatorPTB
19 Jul 2016 19:44:24  INFO POSTagger - POS tagger model file: org/apache/ctakes/postagger/models/mayo-pos.zip
19 Jul 2016 19:44:25  INFO SentenceDetector - Starting processing.
19 Jul 2016 19:44:25  INFO TokenizerAnnotatorPTB - process(JCas) in org.apache.ctakes.core.ae.TokenizerAnnotatorPTB
19 Jul 2016 19:44:25  INFO LvgAnnotator - process(JCas)
19 Jul 2016 19:44:25  INFO ContextDependentTokenizerAnnotator - process(JCas)
19 Jul 2016 19:44:25  INFO POSTagger - process(JCas)
19 Jul 2016 19:44:25  INFO DocTimeRelAnnotatorTest - Event: old DocTimeRel:OVERLAP
19 Jul 2016 19:44:25  INFO DocTimeRelAnnotatorTest - Event: referred DocTimeRel:BEFORE
19 Jul 2016 19:44:25  INFO DocTimeRelAnnotatorTest - Event: diagnosed DocTimeRel:BEFORE
19 Jul 2016 19:44:25  INFO DocTimeRelAnnotatorTest - Event: cancer DocTimeRel:OVERLAP
19 Jul 2016 19:44:25  INFO DocTimeRelAnnotatorTest - Event: blood DocTimeRel:OVERLAP
Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 16.724 sec
Running org.apache.ctakes.temporal.ae.EventTimeRelationAnnotatorTest
19 Jul 2016 19:44:28  INFO ClearNLPDependencyParserAE - using Morphy analysis? true
Loading configuration.
Loading feature templates.
Loading lexica.
Loading model:
........................................................................................
19 Jul 2016 19:44:38  INFO ContextDependentTokenizerAnnotator - Finite state machines loaded.
19 Jul 2016 19:44:38  INFO SentenceDetector - Sentence detector model file: org/apache/ctakes/core/sentdetect/sd-med-model.zip
19 Jul 2016 19:44:39  INFO LvgCmdApiResourceImpl - Loading NLM Norm and Lvg with config file
= /tmp/lvg.properties
19 Jul 2016 19:44:39  INFO LvgCmdApiResourceImpl -   config file absolute path = /tmp/lvg.properties
19 Jul 2016 19:44:39  INFO LvgCmdApiResourceImpl - cwd = <https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/>
19 Jul 2016 19:44:39  INFO LvgCmdApiResourceImpl - cd <https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/>
Exception: java.io.FileNotFoundException: <https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/misc/stopWords.data>
(No such file or directory)
** Error: problem of opening/reading stop words file: '<https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/misc/stopWords.data'.>
Exception: java.io.FileNotFoundException: <https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/misc/nonInfoWords.data>
(No such file or directory)
** Error: problem of opening/reading non-Info words file: '<https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/misc/nonInfoWords.data'.>
Exception: java.io.FileNotFoundException: <https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/misc/conjunctionWord.data>
(No such file or directory)
** Error: problem of opening/reading conjunction words file: '<https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/misc/conjunctionWord.data'.>
** ERR: problem of opening/reading diacritics file: '<https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/Unicode/diacriticMap.data'.>
Exception: java.io.FileNotFoundException: <https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/Unicode/diacriticMap.data>
(No such file or directory)
Exception: java.io.FileNotFoundException: <https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/Unicode/ligatureMap.data>
(No such file or directory)
** Error: problem of opening/reading ligature file: '<https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/Unicode/ligatureMap.data'.>
** Error: problem of opening/reading symbol synonym file: '<https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/Unicode/synonymMap.data'.>
Exception: java.io.FileNotFoundException: <https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/Unicode/synonymMap.data>
(No such file or directory)
**Error: problem of opening/reading file '<https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/misc/removeS.data'.>
Exception: java.io.FileNotFoundException: <https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/misc/removeS.data>
(No such file or directory)
** Error: problem of opening/reading Unicode symbol file: '<https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/Unicode/symbolMap.data'.>
Exception: java.io.FileNotFoundException: <https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/Unicode/symbolMap.data>
(No such file or directory)
** Error: problem of opening/reading Unicode file: '<https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/Unicode/unicodeMap.data'.>
Exception: java.io.FileNotFoundException: <https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/Unicode/unicodeMap.data>
(No such file or directory)
** Error: problem of opening/reading nonStripMap file: '<https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/Unicode/nonStripMap.data'.>
Exception: java.io.FileNotFoundException: <https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/Unicode/nonStripMap.data>
(No such file or directory)
Exception: java.io.FileNotFoundException: <https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/rules/im.rul>
(No such file or directory)
**Error: problem of opening/reading file '<https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws//data/rules/im.rul'.>
Exception: java.io.FileNotFoundException: <https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/rules/im.rul>
(No such file or directory)
**Error: problem of opening/reading file '<https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws//data/rules/im.rul'.>
Exception: java.io.FileNotFoundException: <https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/rules/dm.rul>
(No such file or directory)
**Error: problem of opening/reading file '<https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws//data/rules/dm.rul'.>
Exception: java.io.FileNotFoundException: <https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/rules/dm.rul>
(No such file or directory)
**Error: problem of opening/reading file '<https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws//data/rules/dm.rul'.>
Exception: java.io.FileNotFoundException: <https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/misc/stopWords.data>
(No such file or directory)
** Error: problem of opening/reading stop words file: '<https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/misc/stopWords.data'.>
Exception: java.io.FileNotFoundException: <https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/misc/nonInfoWords.data>
(No such file or directory)
** Error: problem of opening/reading non-Info words file: '<https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/misc/nonInfoWords.data'.>
Exception: java.io.FileNotFoundException: <https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/misc/conjunctionWord.data>
(No such file or directory)
** Error: problem of opening/reading conjunction words file: '<https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/misc/conjunctionWord.data'.>
** ERR: problem of opening/reading diacritics file: '<https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/Unicode/diacriticMap.data'.>
Exception: java.io.FileNotFoundException: <https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/Unicode/diacriticMap.data>
(No such file or directory)
Exception: java.io.FileNotFoundException: <https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/Unicode/ligatureMap.data>
(No such file or directory)
** Error: problem of opening/reading ligature file: '<https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/Unicode/ligatureMap.data'.>
** Error: problem of opening/reading symbol synonym file: '<https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/Unicode/synonymMap.data'.>
Exception: java.io.FileNotFoundException: <https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/Unicode/synonymMap.data>
(No such file or directory)
**Error: problem of opening/reading file '<https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/misc/removeS.data'.>
Exception: java.io.FileNotFoundException: <https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/misc/removeS.data>
(No such file or directory)
** Error: problem of opening/reading Unicode symbol file: '<https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/Unicode/symbolMap.data'.>
Exception: java.io.FileNotFoundException: <https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/Unicode/symbolMap.data>
(No such file or directory)
** Error: problem of opening/reading Unicode file: '<https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/Unicode/unicodeMap.data'.>
Exception: java.io.FileNotFoundException: <https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/Unicode/unicodeMap.data>
(No such file or directory)
** Error: problem of opening/reading nonStripMap file: '<https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/Unicode/nonStripMap.data'.>
Exception: java.io.FileNotFoundException: <https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/Unicode/nonStripMap.data>
(No such file or directory)
Exception: java.io.FileNotFoundException: <https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/rules/im.rul>
(No such file or directory)
**Error: problem of opening/reading file '<https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws//data/rules/im.rul'.>
Exception: java.io.FileNotFoundException: <https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/rules/im.rul>
(No such file or directory)
**Error: problem of opening/reading file '<https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws//data/rules/im.rul'.>
Exception: java.io.FileNotFoundException: <https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/rules/dm.rul>
(No such file or directory)
**Error: problem of opening/reading file '<https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws//data/rules/dm.rul'.>
Exception: java.io.FileNotFoundException: <https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/data/rules/dm.rul>
(No such file or directory)
**Error: problem of opening/reading file '<https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws//data/rules/dm.rul'.>
19 Jul 2016 19:44:39  INFO LvgCmdApiResourceImpl - cd <https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/>
19 Jul 2016 19:44:39  INFO TokenizerAnnotatorPTB - Initializing org.apache.ctakes.core.ae.TokenizerAnnotatorPTB
19 Jul 2016 19:44:39  INFO POSTagger - POS tagger model file: org/apache/ctakes/postagger/models/mayo-pos.zip
19 Jul 2016 19:44:39  INFO SentenceDetector - Starting processing.
19 Jul 2016 19:44:39  INFO TokenizerAnnotatorPTB - process(JCas) in org.apache.ctakes.core.ae.TokenizerAnnotatorPTB
19 Jul 2016 19:44:39  INFO LvgAnnotator - process(JCas)
19 Jul 2016 19:44:39  INFO ContextDependentTokenizerAnnotator - process(JCas)
19 Jul 2016 19:44:39  INFO POSTagger - process(JCas)
Null value found in Feature(<Time-Class->, <NULL>)
Null value found in Feature(<Time-Class->, <NULL>)
Null value found in Feature(<Time-Class->, <NULL>)
Null value found in Feature(<Time-Class->, <NULL>)
Null value found in Feature(<Time-Class->, <NULL>)
19 Jul 2016 19:44:39  INFO EventTimeRelationAnnotatorTest - Relation: RelationArgument
   id: 0
   argument: TimeMention
      sofa: _InitialView
      begin: 58
      end: 66
      id: 0
      ontologyConceptArr: <null>
      typeID: 0
      segmentID: <null>
      sentenceID: <null>
      discoveryTechnique: 0
      confidence: 0.0
      polarity: 0
      uncertainty: 0
      conditional: false
      generic: false
      subject: <null>
      historyOf: 0
      originalText: <null>
      date: <null>
      time: <null>
      timeClass: <null>
   role: "Arg1"
   participatesIn: <null>
 RelationArgument
   id: 0
   argument: EventMention
      sofa: _InitialView
      begin: 67
      end: 76
      id: 0
      ontologyConceptArr: <null>
      typeID: 0
      segmentID: <null>
      sentenceID: <null>
      discoveryTechnique: 0
      confidence: 1.3807402
      polarity: 0
      uncertainty: 0
      conditional: false
      generic: false
      subject: <null>
      historyOf: 0
      originalText: <null>
      event: Event
         id: 0
         ontologyConcept: <null>
         mentions: <null>
         discoveryTechnique: 0
         confidence: 0.0
         conditional: false
         generic: false
         subject: <null>
         polarity: 0
         uncertainty: 0
         historyOf: 0
         properties: EventProperties
            contextualModality: <null>
            contextualAspect: <null>
            permanence: <null>
            category: <null>
            aspect: <null>
            docTimeRel: <null>
            degree: <null>
            polarity: 0
   role: "Arg2"
   participatesIn: <null>
 Category: CONTAINS
Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 14.504 sec
Running org.apache.ctakes.temporal.ae.EventEventRelationAnnotatorTest
19 Jul 2016 19:44:42  INFO ClearNLPDependencyParserAE - using Morphy analysis? true
Loading configuration.
Loading feature templates.
Loading lexica.
Loading model:
........Java HotSpot(TM) 64-Bit Server VM warning: INFO: os::commit_memory(0x0000000767580000,
409993216, 0) failed; error='Cannot allocate memory' (errno=12)
#
# There is insufficient memory for the Java Runtime Environment to continue.
# Native memory allocation (mmap) failed to map 409993216 bytes for committing reserved memory.
# An error report file with more information is saved as:
# <https://builds.apache.org/job/ctakes-trunk-compiletest/org.apache.ctakes$ctakes-temporal/ws/hs_err_pid4708.log>

Results :

Tests run: 3, Failures: 0, Errors: 0, Skipped: 0

[JENKINS] Recording test results
[JENKINS] Archiving disabled

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