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From Apache Jenkins Server <jenk...@builds.apache.org>
Subject Build failed in Jenkins: ctakes-trunk-compiletest #826
Date Tue, 26 Jul 2016 16:26:35 GMT
See <https://builds.apache.org/job/ctakes-trunk-compiletest/826/changes>

Changes:

[dligach] Fixed cases in class names

[dligach] added method to print pos sequences

------------------------------------------
[...truncated 3465 lines...]
A         ctakes-ytex/src/main/java/org/apache/ctakes/ytex/umls/model/MRSTY.java
A         ctakes-ytex/src/main/java/org/apache/ctakes/ytex/umls/model/MRCONSO.java
A         ctakes-ytex/src/main/java/org/apache/ctakes/ytex/umls/model/MRREL.java
A         ctakes-ytex/src/main/java/org/apache/ctakes/ytex/umls/dao
A         ctakes-ytex/src/main/java/org/apache/ctakes/ytex/umls/dao/UMLSDao.java
A         ctakes-ytex/src/main/java/org/apache/ctakes/ytex/umls/dao/UMLSDaoImpl.java
A         ctakes-ytex/pom.xml
A         ctakes-ytex/README
A         ctakes-ytex/LICENSE
A         ctakes-context-tokenizer
A         ctakes-context-tokenizer/pom.xml
A         ctakes-context-tokenizer/resources
A         ctakes-context-tokenizer/resources/launch
A         ctakes-context-tokenizer/README
A         ctakes-context-tokenizer/desc
A         ctakes-context-tokenizer/desc/analysis_engine
A         ctakes-context-tokenizer/desc/analysis_engine/AggregateAE.xml
A         ctakes-context-tokenizer/desc/analysis_engine/ContextDependentTokenizerAnnotator.xml
A         ctakes-context-tokenizer/desc/analysis_engine/TestTAE.xml
A         ctakes-context-tokenizer/LICENSE
A         ctakes-context-tokenizer/src
A         ctakes-context-tokenizer/src/test
A         ctakes-context-tokenizer/src/test/java
A         ctakes-context-tokenizer/src/test/java/org
A         ctakes-context-tokenizer/src/test/java/org/apache
A         ctakes-context-tokenizer/src/test/java/org/apache/ctakes
A         ctakes-context-tokenizer/src/test/java/org/apache/ctakes/contexttokenizer
A         ctakes-context-tokenizer/src/test/java/org/apache/ctakes/contexttokenizer/ae
AU        ctakes-context-tokenizer/src/test/java/org/apache/ctakes/contexttokenizer/ae/TestContextDependentTokenizerAnnotator.java
A         ctakes-context-tokenizer/src/main
A         ctakes-context-tokenizer/src/main/java
A         ctakes-context-tokenizer/src/main/java/org
A         ctakes-context-tokenizer/src/main/java/org/apache
A         ctakes-context-tokenizer/src/main/java/org/apache/ctakes
A         ctakes-context-tokenizer/src/main/java/org/apache/ctakes/contexttokenizer
A         ctakes-context-tokenizer/src/main/java/org/apache/ctakes/contexttokenizer/ae
A         ctakes-context-tokenizer/src/main/java/org/apache/ctakes/contexttokenizer/ae/ContextDependentTokenizerAnnotator.java
A         ctakes-context-tokenizer/src/main/java/org/apache/ctakes/context
A         ctakes-context-tokenizer/data
A         ctakes-context-tokenizer/data/test
A         ctakes-context-tokenizer/data/test/output
A         ctakes-ne-contexts-res
A         ctakes-ne-contexts-res/LICENSE
A         ctakes-ne-contexts-res/src
A         ctakes-ne-contexts-res/src/test
A         ctakes-ne-contexts-res/src/main
A         ctakes-ne-contexts-res/src/main/resources
A         ctakes-ne-contexts-res/src/main/resources/org
A         ctakes-ne-contexts-res/src/main/resources/org/apache
A         ctakes-ne-contexts-res/src/main/resources/org/apache/ctakes
A         ctakes-ne-contexts-res/src/main/resources/org/apache/ctakes/necontexts
A         ctakes-ne-contexts-res/src/main/resources/org/apache/ctakes/necontexts/desc
A         ctakes-ne-contexts-res/src/main/resources/org/apache/ctakes/necontexts/desc/NegationAnnotator.xml
A         ctakes-ne-contexts-res/pom.xml
A         ctakes-dictionary-lookup-fast-res
AU        ctakes-dictionary-lookup-fast-res/LICENSE
A         ctakes-dictionary-lookup-fast-res/src
A         ctakes-dictionary-lookup-fast-res/src/main
A         ctakes-dictionary-lookup-fast-res/src/main/resources
A         ctakes-dictionary-lookup-fast-res/src/main/resources/org
A         ctakes-dictionary-lookup-fast-res/src/main/resources/org/apache
A         ctakes-dictionary-lookup-fast-res/src/main/resources/org/apache/ctakes
A         ctakes-dictionary-lookup-fast-res/src/main/resources/org/apache/ctakes/dictionary
A         ctakes-dictionary-lookup-fast-res/src/main/resources/org/apache/ctakes/dictionary/lookup
A         ctakes-dictionary-lookup-fast-res/src/main/resources/org/apache/ctakes/dictionary/lookup/fast
A         ctakes-dictionary-lookup-fast-res/src/main/resources/org/apache/ctakes/dictionary/lookup/fast/example
A         ctakes-dictionary-lookup-fast-res/src/main/resources/org/apache/ctakes/dictionary/lookup/fast/example/bsv
A         ctakes-dictionary-lookup-fast-res/src/main/resources/org/apache/ctakes/dictionary/lookup/fast/example/bsv/CustomCuiTuiBsv.xml
A         ctakes-dictionary-lookup-fast-res/src/main/resources/org/apache/ctakes/dictionary/lookup/fast/example/bsv/CustomCuiTui2Bsv.xml
A         ctakes-dictionary-lookup-fast-res/src/main/resources/org/apache/ctakes/dictionary/lookup/fast/example/bsv/custom_cui_bsv.bsv
A         ctakes-dictionary-lookup-fast-res/src/main/resources/org/apache/ctakes/dictionary/lookup/fast/example/bsv/custom_cui_tui_bsv.bsv
A         ctakes-dictionary-lookup-fast-res/src/main/resources/org/apache/ctakes/dictionary/lookup/fast/example/bsv/custom_tui_bsv.bsv
A         ctakes-dictionary-lookup-fast-res/src/main/resources/org/apache/ctakes/dictionary/lookup/fast/example/bsv/custom_mixed_bsv.bsv
A         ctakes-dictionary-lookup-fast-res/src/main/resources/org/apache/ctakes/dictionary/lookup/fast/example/bsv/CustomCuiBsv.xml
A         ctakes-dictionary-lookup-fast-res/src/main/resources/org/apache/ctakes/dictionary/lookup/fast/cTakesHsql.xml
A         ctakes-dictionary-lookup-fast-res/src/main/resources/org/apache/ctakes/dictionary/lookup/fast/ctakessnorx
A         ctakes-dictionary-lookup-fast-res/src/main/resources/org/apache/ctakes/dictionary/lookup/fast/ctakessnorx/ctakessnorx.properties
AU        ctakes-dictionary-lookup-fast-res/pom.xml
A         ctakes-dependency-parser-res
A         ctakes-dependency-parser-res/pom.xml
A         ctakes-dependency-parser-res/LICENSE
A         ctakes-dependency-parser-res/src
A         ctakes-dependency-parser-res/src/test
A         ctakes-dependency-parser-res/src/main
A         ctakes-dependency-parser-res/src/main/resources
A         ctakes-dependency-parser-res/src/main/resources/org
A         ctakes-dependency-parser-res/src/main/resources/org/apache
A         ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes
A         ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency
A         ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser
A         ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser/models
A         ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser/models/lemmatizer
A         ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser/models/lemmatizer/README
AU        ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser/models/lemmatizer/dictionary-1.3.1.jar
A         ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser/models/pred
AU        ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser/models/pred/mayo-en-pred-1.3.0.jar
A         ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser/models/dependency
AU        ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser/models/dependency/mayo-en-dep-1.3.0.jar
A         ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser/models/dependency/README
A         ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser/models/srl
AU        ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser/models/srl/mayo-en-srl-1.3.0.jar
A         ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser/models/srl/README
AU        ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser/models/clearparser_models.jar
A         ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser/models/role
AU        ctakes-dependency-parser-res/src/main/resources/org/apache/ctakes/dependency/parser/models/role/mayo-en-role-1.3.0.jar
A         ctakes-chunker
A         ctakes-chunker/scripts
A         ctakes-chunker/scripts/java
A         ctakes-chunker/scripts/java/data
A         ctakes-chunker/scripts/java/data/chunk
A         ctakes-chunker/scripts/java/data/chunk/genia
A         ctakes-chunker/scripts/java/data/chunk/genia/Genia2PTB.java
A         ctakes-chunker/scripts/java/data/chunk/Chunklink2OpenNLP.java
A         ctakes-chunker/scripts/perl
A         ctakes-chunker/scripts/perl/README
A         ctakes-chunker/scripts/groovy
A         ctakes-chunker/scripts/groovy/data
A         ctakes-chunker/scripts/groovy/data/chunk
A         ctakes-chunker/scripts/groovy/data/chunk/TagReport.groovy
A         ctakes-chunker/src
A         ctakes-chunker/src/test
A         ctakes-chunker/src/test/java
A         ctakes-chunker/src/test/java/org
A         ctakes-chunker/src/test/java/org/apache
A         ctakes-chunker/src/test/java/org/apache/ctakes
A         ctakes-chunker/src/test/java/org/apache/ctakes/chunker
A         ctakes-chunker/src/test/java/org/apache/ctakes/chunker/ChunkAdjusterTests.java
A         ctakes-chunker/src/test/java/org/apache/ctakes/chunker/ChunkerTests.java
A         ctakes-chunker/src/test/resources
A         ctakes-chunker/src/test/resources/data
A         ctakes-chunker/src/test/resources/data/output
A         ctakes-chunker/src/test/resources/data/output/text1.txt.included.used.tag-dictionary.xml
A         ctakes-chunker/src/test/resources/data/output/NotesIIST_RTF.DTD
A         ctakes-chunker/src/test/resources/data/output/text1.txt.included.xml
A         ctakes-chunker/src/test/resources/data/unit-test.opennlp.chunks
A         ctakes-chunker/src/test/resources/data/text-files
A         ctakes-chunker/src/test/resources/data/text-files/text1.txt
A         ctakes-chunker/src/test/resources/data/README
A         ctakes-chunker/src/main
A         ctakes-chunker/src/main/java
A         ctakes-chunker/src/main/java/org
A         ctakes-chunker/src/main/java/org/apache
A         ctakes-chunker/src/main/java/org/apache/ctakes
A         ctakes-chunker/src/main/java/org/apache/ctakes/chunker
A         ctakes-chunker/src/main/java/org/apache/ctakes/chunker/ae
A         ctakes-chunker/src/main/java/org/apache/ctakes/chunker/ae/ChunkCreator.java
A         ctakes-chunker/src/main/java/org/apache/ctakes/chunker/ae/DefaultChunkCreator.java
A         ctakes-chunker/src/main/java/org/apache/ctakes/chunker/ae/PhraseTypeChunkCreator.java
A         ctakes-chunker/src/main/java/org/apache/ctakes/chunker/ae/Chunker.java
A         ctakes-chunker/src/main/java/org/apache/ctakes/chunker/ae/adjuster
A         ctakes-chunker/src/main/java/org/apache/ctakes/chunker/ae/adjuster/ChunkAdjuster.java
A         ctakes-chunker/data
A         ctakes-chunker/data/chunk
A         ctakes-chunker/data/chunk/genia
A         ctakes-chunker/data/chunk/genia/genia.opennlp.chunks
A         ctakes-chunker/data/chunk/genia/README
A         ctakes-chunker/data/chunk/combinations
A         ctakes-chunker/data/chunk/ptb
A         ctakes-chunker/data/chunk/ptb/README
A         ctakes-chunker/data/treebank
A         ctakes-chunker/data/treebank/genia
A         ctakes-chunker/data/treebank/genia/README
A         ctakes-chunker/data/treebank/genia/names-00.txt
A         ctakes-chunker/data/treebank/genia/00
A         ctakes-chunker/data/treebank/genia/names-01.txt
A         ctakes-chunker/data/treebank/genia/01
A         ctakes-chunker/pom.xml
A         ctakes-chunker/resources
A         ctakes-chunker/resources/launch
AU        ctakes-chunker/resources/launch/ChunkAdjusterTests.launch
AU        ctakes-chunker/resources/launch/chunker.launch
AU        ctakes-chunker/resources/launch/UIMA_CPE_GUI--chunker.launch
A         ctakes-chunker/README
A         ctakes-chunker/ExampleTrainChunker.bat
A         ctakes-chunker/desc
A         ctakes-chunker/desc/analysis_engine
A         ctakes-chunker/desc/ChunkAdjuster.xml
A         ctakes-chunker/desc/POSTagger.xml
A         ctakes-chunker/desc/AggregateAE.xml
A         ctakes-chunker/desc/collection_processing_engine
A         ctakes-chunker/desc/Chunker.xml
A         ctakes-chunker/desc/test
A         ctakes-chunker/desc/test/ChunkerAggregate.xml
A         ctakes-chunker/desc/test/ChunkerCPE.xml
A         ctakes-chunker/desc/test/POSTagger.xml
A         ctakes-chunker/desc/test/PhraseTypeChunkerAggregate.xml
A         ctakes-chunker/desc/test/Chunker.xml
A         ctakes-chunker/desc/test/TokenizerAnnotator.xml
A         ctakes-chunker/desc/test/ChunkAdjusterAggregate.xml
A         ctakes-chunker/desc/test/ChunkerCpeUsingPosTagDictionary.xml
A         ctakes-chunker/desc/test/SimpleSegmentAnnotator.xml
A         ctakes-chunker/desc/test/AdjustNounPhraseToIncludeFollowingPPNP.xml
A         ctakes-chunker/desc/SimpleSegmentAnnotator.xml
A         ctakes-chunker/desc/AdjustNounPhraseToIncludeFollowingNP.xml
A         ctakes-chunker/desc/AdjustNounPhraseToIncludeFollowingPPNP.xml
A         ctakes-chunker/desc/AdjustOPhraseToIncludeFollowingO.xml
A         ctakes-chunker/desc/ChunkerAggregate.xml
A         ctakes-chunker/desc/ChunkerCPE.xml
A         ctakes-chunker/LICENSE
A         ctakes-pos-tagger-res
A         ctakes-pos-tagger-res/LICENSE
A         ctakes-pos-tagger-res/src
A         ctakes-pos-tagger-res/src/main
A         ctakes-pos-tagger-res/src/main/resources
A         ctakes-pos-tagger-res/src/main/resources/org
A         ctakes-pos-tagger-res/src/main/resources/org/apache
A         ctakes-pos-tagger-res/src/main/resources/org/apache/ctakes
A         ctakes-pos-tagger-res/src/main/resources/org/apache/ctakes/postagger
A         ctakes-pos-tagger-res/src/main/resources/org/apache/ctakes/postagger/models
A         ctakes-pos-tagger-res/src/main/resources/org/apache/ctakes/postagger/models/README
A         ctakes-pos-tagger-res/src/main/resources/org/apache/ctakes/postagger/models/clearnlp
AU        ctakes-pos-tagger-res/src/main/resources/org/apache/ctakes/postagger/models/clearnlp/mayo-en-pos-1.3.0.jar
AU        ctakes-pos-tagger-res/src/main/resources/org/apache/ctakes/postagger/models/mayo-pos.zip
A         ctakes-pos-tagger-res/src/test
A         ctakes-pos-tagger-res/pom.xml
AU        KEYS
 U        .
At revision 1754153

Parsing POMs
Downloaded artifact http://repo.maven.apache.org/maven2/org/apache/apache/13/apache-13.pom
Downloaded artifact http://repo.maven.apache.org/maven2/org/cleartk/cleartk/2.0.0/cleartk-2.0.0.pom
Downloaded artifact http://repo.maven.apache.org/maven2/org/sonatype/oss/oss-parent/7/oss-parent-7.pom
Modules changed, recalculating dependency graph
Established TCP socket on 59113
maven3-agent.jar already up to date
maven3-interceptor.jar already up to date
maven3-interceptor-commons.jar already up to date
[ctakes-trunk-compiletest] $ /home/jenkins/jenkins-slave/tools/hudson.model.JDK/latest1.8/bin/java
-Xmx4g -Xms256m -XX:MaxPermSize=512m -cp /home/jenkins/jenkins-slave/maven3-agent.jar:/home/jenkins/jenkins-slave/tools/hudson.tasks.Maven_MavenInstallation/Maven_3.0.5/boot/plexus-classworlds-2.4.jar
org.jvnet.hudson.maven3.agent.Maven3Main /home/jenkins/jenkins-slave/tools/hudson.tasks.Maven_MavenInstallation/Maven_3.0.5
/home/jenkins/jenkins-slave/slave.jar /home/jenkins/jenkins-slave/maven3-interceptor.jar /home/jenkins/jenkins-slave/maven3-interceptor-commons.jar
59113
Java HotSpot(TM) 64-Bit Server VM warning: ignoring option MaxPermSize=512m; support was removed
in 8.0
Exception in thread "main" java.lang.ClassNotFoundException: hudson.remoting.Launcher
	at org.codehaus.plexus.classworlds.strategy.SelfFirstStrategy.loadClass(SelfFirstStrategy.java:50)
	at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:244)
	at org.codehaus.plexus.classworlds.realm.ClassRealm.loadClass(ClassRealm.java:230)
	at org.jvnet.hudson.maven3.agent.Maven3Main.main(Maven3Main.java:138)
	at org.jvnet.hudson.maven3.agent.Maven3Main.main(Maven3Main.java:70)
ERROR: Failed to parse POMs
java.io.EOFException: unexpected stream termination
	at hudson.remoting.ChannelBuilder.negotiate(ChannelBuilder.java:365)
	at hudson.remoting.ChannelBuilder.build(ChannelBuilder.java:310)
	at hudson.slaves.Channels.forProcess(Channels.java:115)
	at hudson.maven.AbstractMavenProcessFactory.newProcess(AbstractMavenProcessFactory.java:297)
	at hudson.maven.ProcessCache.get(ProcessCache.java:236)
	at hudson.maven.MavenModuleSetBuild$MavenModuleSetBuildExecution.doRun(MavenModuleSetBuild.java:778)
	at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:534)
	at hudson.model.Run.execute(Run.java:1738)
	at hudson.maven.MavenModuleSetBuild.run(MavenModuleSetBuild.java:531)
	at hudson.model.ResourceController.execute(ResourceController.java:98)
	at hudson.model.Executor.run(Executor.java:410)

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