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From Apache Jenkins Server <jenk...@builds.apache.org>
Subject Build failed in Jenkins: ctakes-trunk-compiletest #768
Date Tue, 23 Feb 2016 15:30:04 GMT
See <https://builds.apache.org/job/ctakes-trunk-compiletest/768/changes>

Changes:

[clin] turn on event-expansion for event-time relations

------------------------------------------
[...truncated 5285 lines...]
<https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-core/src/test/java/org/apache/ctakes/core/ae/TokenizerAnnotatorPTBTests.java>:[385,3]
[unchecked] unchecked call to TokenizerAnnotatorPTBTests.SimpleToken(Class<? extends BaseToken>,int,int)
as a member of the raw type TokenizerAnnotatorPTBTests.SimpleToken
[WARNING]   where BaseToken is a type-variable:
    BaseToken extends Object declared in class TokenizerAnnotatorPTBTests.SimpleToken
<https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-core/src/test/java/org/apache/ctakes/core/ae/TokenizerAnnotatorPTBTests.java>:[386,3]
[unchecked] unchecked call to TokenizerAnnotatorPTBTests.SimpleToken(Class<? extends BaseToken>,int,int)
as a member of the raw type TokenizerAnnotatorPTBTests.SimpleToken
[WARNING]   where BaseToken is a type-variable:
    BaseToken extends Object declared in class TokenizerAnnotatorPTBTests.SimpleToken
<https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-core/src/test/java/org/apache/ctakes/core/ae/TokenizerAnnotatorPTBTests.java>:[387,3]
[unchecked] unchecked call to TokenizerAnnotatorPTBTests.SimpleToken(Class<? extends BaseToken>,int,int)
as a member of the raw type TokenizerAnnotatorPTBTests.SimpleToken
[WARNING]   where BaseToken is a type-variable:
    BaseToken extends Object declared in class TokenizerAnnotatorPTBTests.SimpleToken
<https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-core/src/test/java/org/apache/ctakes/core/ae/TokenizerAnnotatorPTBTests.java>:[394,2]
[unchecked] unchecked call to TokenizerAnnotatorPTBTests.SimpleToken(Class<? extends BaseToken>,int,int)
as a member of the raw type TokenizerAnnotatorPTBTests.SimpleToken
[WARNING]   where BaseToken is a type-variable:
    BaseToken extends Object declared in class TokenizerAnnotatorPTBTests.SimpleToken
<https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-core/src/test/java/org/apache/ctakes/core/ae/TokenizerAnnotatorPTBTests.java>:[395,2]
[unchecked] unchecked call to TokenizerAnnotatorPTBTests.SimpleToken(Class<? extends BaseToken>,int,int)
as a member of the raw type TokenizerAnnotatorPTBTests.SimpleToken
[WARNING]   where BaseToken is a type-variable:
    BaseToken extends Object declared in class TokenizerAnnotatorPTBTests.SimpleToken
<https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-core/src/test/java/org/apache/ctakes/core/ae/TokenizerAnnotatorPTBTests.java>:[396,2]
[unchecked] unchecked call to TokenizerAnnotatorPTBTests.SimpleToken(Class<? extends BaseToken>,int,int)
as a member of the raw type TokenizerAnnotatorPTBTests.SimpleToken
[WARNING]   where BaseToken is a type-variable:
    BaseToken extends Object declared in class TokenizerAnnotatorPTBTests.SimpleToken
<https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-core/src/test/java/org/apache/ctakes/core/ae/TokenizerAnnotatorPTBTests.java>:[398,2]
[unchecked] unchecked call to TokenizerAnnotatorPTBTests.SimpleToken(Class<? extends BaseToken>,int,int)
as a member of the raw type TokenizerAnnotatorPTBTests.SimpleToken
[WARNING]   where BaseToken is a type-variable:
    BaseToken extends Object declared in class TokenizerAnnotatorPTBTests.SimpleToken
<https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-core/src/test/java/org/apache/ctakes/core/ae/TokenizerAnnotatorPTBTests.java>:[399,2]
[unchecked] unchecked call to TokenizerAnnotatorPTBTests.SimpleToken(Class<? extends BaseToken>,int,int)
as a member of the raw type TokenizerAnnotatorPTBTests.SimpleToken
[WARNING]   where BaseToken is a type-variable:
    BaseToken extends Object declared in class TokenizerAnnotatorPTBTests.SimpleToken
<https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-core/src/test/java/org/apache/ctakes/core/ae/TokenizerAnnotatorPTBTests.java>:[400,2]
[unchecked] unchecked call to TokenizerAnnotatorPTBTests.SimpleToken(Class<? extends BaseToken>,int,int)
as a member of the raw type TokenizerAnnotatorPTBTests.SimpleToken
[WARNING]   where BaseToken is a type-variable:
    BaseToken extends Object declared in class TokenizerAnnotatorPTBTests.SimpleToken
<https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-core/src/test/java/org/apache/ctakes/core/ae/TokenizerAnnotatorPTBTests.java>:[402,2]
[unchecked] unchecked call to TokenizerAnnotatorPTBTests.SimpleToken(Class<? extends BaseToken>,int,int)
as a member of the raw type TokenizerAnnotatorPTBTests.SimpleToken
[WARNING]   where BaseToken is a type-variable:
    BaseToken extends Object declared in class TokenizerAnnotatorPTBTests.SimpleToken
<https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-core/src/test/java/org/apache/ctakes/core/ae/TokenizerAnnotatorPTBTests.java>:[403,2]
[unchecked] unchecked call to TokenizerAnnotatorPTBTests.SimpleToken(Class<? extends BaseToken>,int,int)
as a member of the raw type TokenizerAnnotatorPTBTests.SimpleToken
[WARNING]   where BaseToken is a type-variable:
    BaseToken extends Object declared in class TokenizerAnnotatorPTBTests.SimpleToken
<https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-core/src/test/java/org/apache/ctakes/core/ae/TokenizerAnnotatorPTBTests.java>:[404,2]
[unchecked] unchecked call to TokenizerAnnotatorPTBTests.SimpleToken(Class<? extends BaseToken>,int,int)
as a member of the raw type TokenizerAnnotatorPTBTests.SimpleToken
[WARNING]   where BaseToken is a type-variable:
    BaseToken extends Object declared in class TokenizerAnnotatorPTBTests.SimpleToken
<https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-core/src/test/java/org/apache/ctakes/core/ae/TokenizerAnnotatorPTBTests.java>:[406,2]
[unchecked] unchecked call to TokenizerAnnotatorPTBTests.SimpleToken(Class<? extends BaseToken>,int,int)
as a member of the raw type TokenizerAnnotatorPTBTests.SimpleToken
[WARNING]   where BaseToken is a type-variable:
    BaseToken extends Object declared in class TokenizerAnnotatorPTBTests.SimpleToken
<https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-core/src/test/java/org/apache/ctakes/core/ae/TokenizerAnnotatorPTBTests.java>:[407,2]
[unchecked] unchecked call to TokenizerAnnotatorPTBTests.SimpleToken(Class<? extends BaseToken>,int,int)
as a member of the raw type TokenizerAnnotatorPTBTests.SimpleToken
[WARNING]   where BaseToken is a type-variable:
    BaseToken extends Object declared in class TokenizerAnnotatorPTBTests.SimpleToken
<https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-core/src/test/java/org/apache/ctakes/core/ae/TokenizerAnnotatorPTBTests.java>:[408,2]
[unchecked] unchecked call to TokenizerAnnotatorPTBTests.SimpleToken(Class<? extends BaseToken>,int,int)
as a member of the raw type TokenizerAnnotatorPTBTests.SimpleToken
[WARNING]   where BaseToken is a type-variable:
    BaseToken extends Object declared in class TokenizerAnnotatorPTBTests.SimpleToken
<https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-core/src/test/java/org/apache/ctakes/core/ae/TokenizerAnnotatorPTBTests.java>:[409,2]
[unchecked] unchecked call to TokenizerAnnotatorPTBTests.SimpleToken(Class<? extends BaseToken>,int,int)
as a member of the raw type TokenizerAnnotatorPTBTests.SimpleToken
[WARNING]   where BaseToken is a type-variable:
    BaseToken extends Object declared in class TokenizerAnnotatorPTBTests.SimpleToken
<https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-core/src/test/java/org/apache/ctakes/core/ae/TokenizerAnnotatorPTBTests.java>:[411,2]
[unchecked] unchecked call to TokenizerAnnotatorPTBTests.SimpleToken(Class<? extends BaseToken>,int,int)
as a member of the raw type TokenizerAnnotatorPTBTests.SimpleToken
[WARNING]   where BaseToken is a type-variable:
    BaseToken extends Object declared in class TokenizerAnnotatorPTBTests.SimpleToken
<https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-core/src/test/java/org/apache/ctakes/core/ae/TokenizerAnnotatorPTBTests.java>:[413,2]
[unchecked] unchecked call to TokenizerAnnotatorPTBTests.SimpleToken(Class<? extends BaseToken>,int,int)
as a member of the raw type TokenizerAnnotatorPTBTests.SimpleToken
[WARNING]   where BaseToken is a type-variable:
    BaseToken extends Object declared in class TokenizerAnnotatorPTBTests.SimpleToken
<https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-core/src/test/java/org/apache/ctakes/core/ae/TokenizerAnnotatorPTBTests.java>:[414,2]
[unchecked] unchecked call to TokenizerAnnotatorPTBTests.SimpleToken(Class<? extends BaseToken>,int,int)
as a member of the raw type TokenizerAnnotatorPTBTests.SimpleToken
[WARNING]   where BaseToken is a type-variable:
    BaseToken extends Object declared in class TokenizerAnnotatorPTBTests.SimpleToken
<https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-core/src/test/java/org/apache/ctakes/core/ae/TokenizerAnnotatorPTBTests.java>:[416,2]
[unchecked] unchecked call to TokenizerAnnotatorPTBTests.SimpleToken(Class<? extends BaseToken>,int,int)
as a member of the raw type TokenizerAnnotatorPTBTests.SimpleToken
[WARNING]   where BaseToken is a type-variable:
    BaseToken extends Object declared in class TokenizerAnnotatorPTBTests.SimpleToken
<https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-core/src/test/java/org/apache/ctakes/core/ae/TokenizerAnnotatorPTBTests.java>:[417,2]
[unchecked] unchecked call to TokenizerAnnotatorPTBTests.SimpleToken(Class<? extends BaseToken>,int,int)
as a member of the raw type TokenizerAnnotatorPTBTests.SimpleToken
[WARNING]   where BaseToken is a type-variable:
    BaseToken extends Object declared in class TokenizerAnnotatorPTBTests.SimpleToken
<https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-core/src/test/java/org/apache/ctakes/core/ae/TokenizerAnnotatorPTBTests.java>:[419,2]
[unchecked] unchecked call to TokenizerAnnotatorPTBTests.SimpleToken(Class<? extends BaseToken>,int,int)
as a member of the raw type TokenizerAnnotatorPTBTests.SimpleToken
[WARNING]   where BaseToken is a type-variable:
    BaseToken extends Object declared in class TokenizerAnnotatorPTBTests.SimpleToken
<https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-core/src/test/java/org/apache/ctakes/core/ae/TokenizerAnnotatorPTBTests.java>:[420,2]
[unchecked] unchecked call to TokenizerAnnotatorPTBTests.SimpleToken(Class<? extends BaseToken>,int,int)
as a member of the raw type TokenizerAnnotatorPTBTests.SimpleToken
[WARNING]   where BaseToken is a type-variable:
    BaseToken extends Object declared in class TokenizerAnnotatorPTBTests.SimpleToken
<https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-core/src/test/java/org/apache/ctakes/core/ae/TokenizerAnnotatorPTBTests.java>:[421,2]
[unchecked] unchecked call to TokenizerAnnotatorPTBTests.SimpleToken(Class<? extends BaseToken>,int,int)
as a member of the raw type TokenizerAnnotatorPTBTests.SimpleToken
[WARNING]   where BaseToken is a type-variable:
    BaseToken extends Object declared in class TokenizerAnnotatorPTBTests.SimpleToken
<https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-core/src/test/java/org/apache/ctakes/core/ae/TokenizerAnnotatorPTBTests.java>:[422,2]
[unchecked] unchecked call to TokenizerAnnotatorPTBTests.SimpleToken(Class<? extends BaseToken>,int,int)
as a member of the raw type TokenizerAnnotatorPTBTests.SimpleToken
[WARNING]   where BaseToken is a type-variable:
    BaseToken extends Object declared in class TokenizerAnnotatorPTBTests.SimpleToken
<https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-core/src/test/java/org/apache/ctakes/core/ae/TokenizerAnnotatorPTBTests.java>:[423,2]
[unchecked] unchecked call to TokenizerAnnotatorPTBTests.SimpleToken(Class<? extends BaseToken>,int,int)
as a member of the raw type TokenizerAnnotatorPTBTests.SimpleToken
[WARNING]   where BaseToken is a type-variable:
    BaseToken extends Object declared in class TokenizerAnnotatorPTBTests.SimpleToken
<https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-core/src/test/java/org/apache/ctakes/core/ae/TokenizerAnnotatorPTBTests.java>:[424,2]
[unchecked] unchecked call to TokenizerAnnotatorPTBTests.SimpleToken(Class<? extends BaseToken>,int,int)
as a member of the raw type TokenizerAnnotatorPTBTests.SimpleToken
[INFO] 
[INFO] --- maven-surefire-plugin:2.12.1:test (default-test) @ ctakes-core ---
[INFO] Surefire report directory: <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-core/target/surefire-reports>

-------------------------------------------------------
 T E S T S
-------------------------------------------------------
Running org.apache.ctakes.core.ae.SentenceDetectorAnnotatorTest
log4j: reset attribute= "false".
log4j: Threshold ="null".
log4j: Retreiving an instance of org.apache.log4j.Logger.
log4j: Setting [ProgressAppender] additivity to [false].
log4j: Level value for ProgressAppender is  [INFO].
log4j: ProgressAppender level set to INFO
log4j: Class name: [org.apache.log4j.ConsoleAppender]
log4j: Parsing layout of class: "org.apache.log4j.PatternLayout"
log4j: Setting property [conversionPattern] to [%m].
log4j: Adding appender named [noEolAppender] to category [ProgressAppender].
log4j: Retreiving an instance of org.apache.log4j.Logger.
log4j: Setting [ProgressDone] additivity to [false].
log4j: Level value for ProgressDone is  [INFO].
log4j: ProgressDone level set to INFO
log4j: Class name: [org.apache.log4j.ConsoleAppender]
log4j: Parsing layout of class: "org.apache.log4j.PatternLayout"
log4j: Setting property [conversionPattern] to [%m%n].
log4j: Adding appender named [eolAppender] to category [ProgressDone].
log4j: Level value for root is  [INFO].
log4j: root level set to INFO
log4j: Class name: [org.apache.log4j.ConsoleAppender]
log4j: Parsing layout of class: "org.apache.log4j.PatternLayout"
log4j: Setting property [conversionPattern] to [%d{dd MMM yyyy HH:mm:ss} %5p %c{1} - %m%n].
log4j: Adding appender named [consoleAppender] to category [root].
23 Feb 2016 15:29:35  INFO SentenceDetector - Sentence detector model file: org/apache/ctakes/core/sentdetect/sd-med-model.zip
23 Feb 2016 15:29:36  INFO CDASegmentAnnotator - Reading Section File org/apache/ctakes/core/sections/ccda_sections.txt
23 Feb 2016 15:29:36  INFO CDASegmentAnnotator - Warning: Skipped reading sections config
row: []
23 Feb 2016 15:29:36  INFO SentenceDetector - Starting processing.
23 Feb 2016 15:29:36  INFO SentenceDetector - Sentence detector model file: org/apache/ctakes/core/sentdetect/sd-med-model.zip
23 Feb 2016 15:29:37  INFO SentenceDetector - Starting processing.
Java HotSpot(TM) 64-Bit Server VM warning: INFO: os::commit_memory(0x0000000784a00000, 90177536,
0) failed; error='Cannot allocate memory' (errno=12)
#
# There is insufficient memory for the Java Runtime Environment to continue.
# Native memory allocation (mmap) failed to map 90177536 bytes for committing reserved memory.
# An error report file with more information is saved as:
# <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-core/hs_err_pid30441.log>

Results :

Tests run: 0, Failures: 0, Errors: 0, Skipped: 0

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[INFO] ------------------------------------------------------------------------
[INFO] Reactor Summary:
[INFO] 
[INFO] Apache cTAKES ..................................... SUCCESS [5.707s]
[INFO] Apache cTAKES common type system .................. SUCCESS [14.597s]
[INFO] Apache cTAKES utils ............................... SUCCESS [4.235s]
[INFO] Apache cTAKES Resources core ...................... SUCCESS [1.855s]
[INFO] Apache cTAKES core ................................ FAILURE [18.498s]
[INFO] Apache cTAKES Resources pos-tagger ................ SKIPPED
[INFO] Apache cTAKES part-of-speech tagger ............... SKIPPED
[INFO] Apache cTAKES Resources ctakes-chunker-res ........ SKIPPED
[INFO] Apache cTAKES chunker ............................. SKIPPED
[INFO] Apache cTAKES document preprocessor ............... SKIPPED
[INFO] Apache cTAKES Resources dictionary-lookup ......... SKIPPED
[INFO] Apache cTAKES dictionary lookup ................... SKIPPED
[INFO] Apache cTAKES context dependent tokenizer ......... SKIPPED
[INFO] Apache cTAKES Resources lvg ....................... SKIPPED
[INFO] Apache cTAKES LVG lexical tools ................... SKIPPED
[INFO] Apache cTAKES Resources ne-contexts ............... SKIPPED
[INFO] Apache cTAKES named entity contexts ............... SKIPPED
[INFO] Apache cTAKES Resources constituency-parser ....... SKIPPED
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[INFO] Apache cTAKES Resources relation-extractor ........ SKIPPED
[INFO] Apache cTAKES Resources dependency-parser ......... SKIPPED
[INFO] Apache cTAKES Dependency Parser ................... SKIPPED
[INFO] Apache cTAKES Relation Extractor .................. SKIPPED
[INFO] Apache cTAKES CoReference Resolver ................ SKIPPED
[INFO] Apache cTAKES Resources drug-ner .................. SKIPPED
[INFO] Apache cTAKES Drug NER ............................ SKIPPED
[INFO] Apache cTAKES Resources side-effect ............... SKIPPED
[INFO] Apache cTAKES Side Effects ........................ SKIPPED
[INFO] Apache cTAKES Resources smoking-status ............ SKIPPED
[INFO] Apache cTAKES Smoking Status ...................... SKIPPED
[INFO] Apache cTAKES Resources assertion ................. SKIPPED
[INFO] Apache cTAKES Assertion ........................... SKIPPED
[INFO] Apache cTAKES Resources assertion-zoner ........... SKIPPED
[INFO] Apache cTAKES Assertion's zoner ................... SKIPPED
[INFO] Apache cTAKES Resources temporal .................. SKIPPED
[INFO] Apache cTAKES Resources dictionary-lookup-fast-res  SKIPPED
[INFO] Apache cTAKES dictionary lookup fast .............. SKIPPED
[INFO] Apache cTAKES Resources ctakes-ytex-res ........... SKIPPED
[INFO] Apache cTAKES YTEX ................................ SKIPPED
[INFO] Apache cTAKES YTEX UIMA ........................... SKIPPED
[INFO] Apache cTAKES ctakes-clinical-pipeline ............ SKIPPED
[INFO] Apache cTAKES Temporal Information Extraction ..... SKIPPED
[INFO] Apache cTAKES YTEX Web ............................ SKIPPED
[INFO] Apache cTAKES Distribution ........................ SKIPPED
[INFO] Apache cTAKES Regression-test ..................... SKIPPED
[INFO] Apache cTAKES template filler ..................... SKIPPED
[INFO] ctakes-examples ................................... SKIPPED
[INFO] ------------------------------------------------------------------------
[INFO] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 53.150s
[INFO] Finished at: Tue Feb 23 15:29:41 UTC 2016
[INFO] Final Memory: 42M/653M
[INFO] ------------------------------------------------------------------------
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[ERROR] Failed to execute goal org.apache.maven.plugins:maven-surefire-plugin:2.12.1:test
(default-test) on project ctakes-core: Execution default-test of goal org.apache.maven.plugins:maven-surefire-plugin:2.12.1:test
failed: The forked VM terminated without saying properly goodbye. VM crash or System.exit
called ? -> [Help 1]
[ERROR] 
[ERROR] To see the full stack trace of the errors, re-run Maven with the -e switch.
[ERROR] Re-run Maven using the -X switch to enable full debug logging.
[ERROR] 
[ERROR] For more information about the errors and possible solutions, please read the following
articles:
[ERROR] [Help 1] http://cwiki.apache.org/confluence/display/MAVEN/PluginExecutionException
[ERROR] 
[ERROR] After correcting the problems, you can resume the build with the command
[ERROR]   mvn <goals> -rf :ctakes-core
Sending e-mails to: notifications@ctakes.apache.org
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