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From "Fedor Nikolaev (JIRA)" <j...@apache.org>
Subject [jira] [Commented] (CTAKES-388) URI is not hierarchical when attempting to obtain LookupDesc_Db.xml within JAR
Date Fri, 27 Nov 2015 04:46:10 GMT

    [ https://issues.apache.org/jira/browse/CTAKES-388?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=15029455#comment-15029455
] 

Fedor Nikolaev commented on CTAKES-388:
---------------------------------------

Finally managed to run it with
{code}mvn exec:exec -pl ctakes-clinical-pipeline -Dexec.executable="java" -Dexec.args="-cp
$PWD/ctakes-dictionary-lookup-res/target/classes:$PWD/ctakes-assertion-res/target/classes:%classpath
-Dctakes.umlsuser=fsqcds -Dctakes.umlspw=<mypass> -Duser.dir=$PWD/ctakes-lvg-res/src/main/resources/org/apache/ctakes/lvg
org.apache.ctakes.clinicalpipeline.ClinicalPipelineFactory"{code}

> URI is not hierarchical when attempting to obtain LookupDesc_Db.xml within JAR
> ------------------------------------------------------------------------------
>
>                 Key: CTAKES-388
>                 URL: https://issues.apache.org/jira/browse/CTAKES-388
>             Project: cTAKES
>          Issue Type: Improvement
>          Components: ctakes-dictionary-lookup
>    Affects Versions: 3.2.2
>         Environment: MacOSX 10.9.5, cTAKES 3.2.3-SNAPSHOT, Apache Spark 1.5.1, Apache
Hadoop 2.4.0
>            Reporter: Lewis John McGibbney
>             Fix For: 3.2.3
>
>         Attachments: CTAKES-388.patch
>
>
> This issue is extremely similar to CTAKES-385 where the is an attempt to load a resource
(in this case LookupDesc_Db.xml) as a File instead of an InputStream.



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