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From "ASF subversion and git services (JIRA)" <j...@apache.org>
Subject [jira] [Commented] (CTAKES-263) OpenJDK6: Out of memory error on CVD default example
Date Wed, 18 Jun 2014 17:16:26 GMT

    [ https://issues.apache.org/jira/browse/CTAKES-263?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=14035973#comment-14035973
] 

ASF subversion and git services commented on CTAKES-263:
--------------------------------------------------------

Commit 1603535 from chenpei@apache.org in branch 'ctakes/trunk'
[ https://svn.apache.org/r1603535 ]

CTAKES-263 - OpenJDK6: Out of memory error on CVD default example
Made the max heap consistent to 3g across the pipelines launch startup scripts.  
Not sure why we actually need so many different eclipse launch scripts, but that is a separate
issue.

> OpenJDK6: Out of memory error on CVD default example
> ----------------------------------------------------
>
>                 Key: CTAKES-263
>                 URL: https://issues.apache.org/jira/browse/CTAKES-263
>             Project: cTAKES
>          Issue Type: Bug
>    Affects Versions: 3.1.0
>         Environment: Physical Memory: 4GB
> UMLS logon: no, using defaults only 
> Java Memory: -Xms512M -Xmx1024M
> java version "1.6.0_27"
> OpenJDK Runtime Environment (IcedTea6 1.12.6) (6b27-1.12.6-1ubuntu0.13.04.2) OpenJDK
64-Bit Server VM (build 20.0-b12, mixed mode)
>            Reporter: Andy McMurry
>            Assignee: Andy McMurry
>            Priority: Minor
>              Labels: openjdk
>             Fix For: 3.2.0
>
>   Original Estimate: 24h
>  Remaining Estimate: 24h
>
> Steps to reproduce
> [Step #1]. 
> Follow instructions per User Guide 
> https://cwiki.apache.org/confluence/display/CTAKES/cTAKES+3.1+User+Install+Guide
> [Step #2]. Run default CVD 
> bin/runctakesCVD.sh
>  
> [Step #3]. Expected = AE loaded, actual = Memory error 
> Exception in thread "AWT-EventQueue-2" java.lang.OutOfMemoryError: Java heap space
> 	at scala.collection.mutable.BitSet.<init>(BitSet.scala:48)
> 	at org.mitre.jcarafe.crf.CoreModelSerializer$$anonfun$bitsetMap$2.apply(Model.scala:191)
> 	at org.mitre.jcarafe.crf.CoreModelSerializer$$anonfun$bitsetMap$2.apply(Model.scala:190)
> 	at sbinary.Generic$$anon$5.reads(generic.scala:71)
> 	at sbinary.Operations$.read(operations.scala:9)
> 	at sbinary.Generic$$anon$11.reads(generic.scala:170)
> 	at sbinary.Operations$.read(operations.scala:9)
> 	at sbinary.BasicTypes$$anon$4.reads(standardtypes.scala:29)
> 	at sbinary.BasicTypes$$anon$4.reads(standardtypes.scala:24)
> 	at sbinary.Operations$.read(operations.scala:9)
> 	at sbinary.Generic$CollectionFormat$$anonfun$reads$1.apply(generic.scala:23)
> 	at sbinary.Generic$CollectionFormat$$anonfun$reads$1.apply(generic.scala:23)
> 	at scala.collection.TraversableLike$$anonfun$map$1.apply(TraversableLike.scala:194)
> 	at scala.collection.TraversableLike$$anonfun$map$1.apply(TraversableLike.scala:194)
> 	at scala.collection.immutable.Range.foreach(Range.scala:75)
> 	at scala.collection.TraversableLike$class.map(TraversableLike.scala:194)
> 	at scala.collection.immutable.Range.map(Range.scala:43)
> 	at sbinary.Generic$CollectionFormat.reads(generic.scala:23)
> 	at sbinary.Operations$.read(operations.scala:9)
> 	at sbinary.Generic$$anon$5.reads(generic.scala:71)
> 	at sbinary.Operations$.read(operations.scala:9)
> 	at sbinary.BasicTypes$$anon$3.reads(standardtypes.scala:10)
> 	at sbinary.BasicTypes$$anon$3.reads(standardtypes.scala:8)
> 	at sbinary.Operations$.read(operations.scala:9)
> 	at sbinary.Generic$$anon$11.reads(generic.scala:167)
> 	at sbinary.Operations$.read(operations.scala:9)
> 	at sbinary.Generic$$anon$14.reads(generic.scala:259)
> 	at sbinary.Operations$.read(operations.scala:9)
> 	at sbinary.Operations$.fromFile(operations.scala:45)
> 	at org.mitre.jcarafe.crf.StandardSerializer$.readModel(Model.scala:329)
> 	at org.mitre.jcarafe.crf.StandardSerializer$.readModel(Model.scala:333)
> 	at org.mitre.jcarafe.scopetagger.FullDecoder$$anon$9.<init>(ScopeParser.scala:89)



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