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From Apache Jenkins Server <jenk...@builds.apache.org>
Subject Build failed in Jenkins: ctakes-trunk-compiletest #410
Date Wed, 28 Aug 2013 22:55:21 GMT
See <https://builds.apache.org/job/ctakes-trunk-compiletest/410/changes>

Changes:

[swu] more negation (annotation/cotraining) tests

------------------------------------------
[...truncated 1663 lines...]
Aug 28, 2013 10:52:25 PM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: --- maven-clean-plugin:2.4.1:clean (default-clean) @ ctakes-preprocessor ---
[INFO] Deleting <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-preprocessor/target>
Aug 28, 2013 10:52:25 PM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: 
Aug 28, 2013 10:52:25 PM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: --- maven-remote-resources-plugin:1.4:process (default) @ ctakes-preprocessor ---
Downloading: http://repo.maven.apache.org/maven2/jwnl/jwnl/1.3.3/jwnl-1.3.3.pom
Aug 28, 2013 10:52:25 PM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: 
Aug 28, 2013 10:52:25 PM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: --- maven-resources-plugin:2.5:resources (default-resources) @ ctakes-preprocessor ---
[debug] execute contextualize
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] Copying 4 resources
[INFO] Copying 3 resources
Aug 28, 2013 10:52:26 PM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: 
Aug 28, 2013 10:52:26 PM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: --- maven-compiler-plugin:2.4:compile (default-compile) @ ctakes-preprocessor ---
[INFO] Compiling 10 source files to <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-preprocessor/target/classes>
[WARNING] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-preprocessor/src/main/java/org/apache/ctakes/preprocessor/ClinicalNotePreProcessor.java>:[889,29]
[unchecked] unchecked call to add(E) as a member of the raw type java.util.List
[WARNING] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-preprocessor/src/main/java/org/apache/ctakes/preprocessor/DocumentMetaData.java>:[50,23]
[unchecked] unchecked call to put(K,V) as a member of the raw type java.util.Map
[WARNING] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-preprocessor/src/main/java/org/apache/ctakes/preprocessor/DocumentMetaData.java>:[97,25]
[unchecked] unchecked call to add(E) as a member of the raw type java.util.List
[WARNING] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-preprocessor/src/main/java/org/apache/ctakes/preprocessor/DocumentMetaData.java>:[106,28]
[unchecked] unchecked call to addAll(java.util.Collection<? extends E>) as a member
of the raw type java.util.List
Aug 28, 2013 10:52:26 PM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: 
Aug 28, 2013 10:52:26 PM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: --- maven-remote-resources-plugin:1.4:process (default) @ ctakes-preprocessor ---
Downloading: http://repo.maven.apache.org/maven2/jwnl/jwnl/1.3.3/jwnl-1.3.3.pom
Aug 28, 2013 10:52:26 PM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: 
Aug 28, 2013 10:52:26 PM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: --- maven-resources-plugin:2.5:resources (default-resources) @ ctakes-preprocessor ---
[debug] execute contextualize
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] Copying 4 resources
[INFO] Copying 3 resources
[INFO] Copying 3 resources
Aug 28, 2013 10:52:26 PM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: 
Aug 28, 2013 10:52:26 PM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: --- maven-compiler-plugin:2.4:compile (default-compile) @ ctakes-preprocessor ---
[INFO] Nothing to compile - all classes are up to date
Aug 28, 2013 10:52:26 PM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: 
Aug 28, 2013 10:52:26 PM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: --- maven-resources-plugin:2.5:testResources (default-testResources) @ ctakes-preprocessor
---
[debug] execute contextualize
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] Copying 2 resources
[INFO] Copying 3 resources
[INFO] Copying 3 resources
Aug 28, 2013 10:52:26 PM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: 
Aug 28, 2013 10:52:26 PM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: --- maven-compiler-plugin:2.4:testCompile (default-testCompile) @ ctakes-preprocessor
---
[INFO] Compiling 1 source file to <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-preprocessor/target/test-classes>
Aug 28, 2013 10:52:27 PM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: 
Aug 28, 2013 10:52:27 PM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: --- maven-surefire-plugin:2.12:test (default-test) @ ctakes-preprocessor ---
[INFO] Surefire report directory: <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-preprocessor/target/surefire-reports>

-------------------------------------------------------
 T E S T S
-------------------------------------------------------
Running org.apache.ctakes.preprocessor.ClinicalNotePreProcessorTest
log4j: reset attribute= "false".
log4j: Threshold ="null".
log4j: Level value for root is  [INFO].
log4j: root level set to INFO
log4j: Class name: [org.apache.log4j.ConsoleAppender]
log4j: Parsing layout of class: "org.apache.log4j.PatternLayout"
log4j: Setting property [conversionPattern] to [%d{dd MMM yyyy HH:mm:ss} %5p %c{1} - %m%n].
log4j: Adding appender named [consoleAppender] to category [root].
Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.475 sec

Results :

Tests run: 1, Failures: 0, Errors: 0, Skipped: 0

[JENKINS] Recording test results
Aug 28, 2013 10:52:36 PM org.apache.maven.cli.event.ExecutionEventLogger projectStarted
INFO:                                                                         
Aug 28, 2013 10:52:36 PM org.apache.maven.cli.event.ExecutionEventLogger projectStarted
INFO: ------------------------------------------------------------------------
Aug 28, 2013 10:52:36 PM org.apache.maven.cli.event.ExecutionEventLogger projectStarted
INFO: Building Apache cTAKES dictionary lookup 3.2.0-SNAPSHOT
Aug 28, 2013 10:52:36 PM org.apache.maven.cli.event.ExecutionEventLogger projectStarted
INFO: ------------------------------------------------------------------------
Downloading: http://repository.apache.org/snapshots/org/apache/ctakes/ctakes-dictionary-lookup-res/3.2.0-SNAPSHOT/ctakes-dictionary-lookup-res-3.2.0-SNAPSHOT.pom
[WARNING] The POM for org.apache.ctakes:ctakes-dictionary-lookup-res:jar:3.2.0-SNAPSHOT is
missing, no dependency information available
Downloading: http://repository.apache.org/snapshots/org/apache/ctakes/ctakes-dictionary-lookup-res/3.2.0-SNAPSHOT/ctakes-dictionary-lookup-res-3.2.0-SNAPSHOT.jar
Aug 28, 2013 10:52:37 PM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary
INFO: ------------------------------------------------------------------------
Aug 28, 2013 10:52:37 PM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary
INFO: Reactor Summary:
Aug 28, 2013 10:52:37 PM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary
INFO: 
Aug 28, 2013 10:52:37 PM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary
INFO: Apache cTAKES ..................................... SUCCESS [19.386s]
Aug 28, 2013 10:52:37 PM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary
INFO: Apache cTAKES common type system .................. SUCCESS [17.878s]
Aug 28, 2013 10:52:37 PM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary
INFO: Apache cTAKES utils ............................... SUCCESS [8.221s]
Aug 28, 2013 10:52:37 PM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary
INFO: Apache cTAKES Resources core ...................... SUCCESS [4.586s]
Aug 28, 2013 10:52:37 PM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary
INFO: Apache cTAKES core ................................ SUCCESS [15.703s]
Aug 28, 2013 10:52:37 PM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary
INFO: Apache cTAKES Resources pos-tagger ................ SUCCESS [4.225s]
Aug 28, 2013 10:52:37 PM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary
INFO: Apache cTAKES part-of-speech tagger ............... SUCCESS [18.208s]
Aug 28, 2013 10:52:37 PM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary
INFO: Apache cTAKES Resources ctakes-chunker-res ........ SUCCESS [5.471s]
Aug 28, 2013 10:52:37 PM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary
INFO: Apache cTAKES chunker ............................. SUCCESS [19.025s]
Aug 28, 2013 10:52:37 PM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary
INFO: Apache cTAKES document preprocessor ............... SUCCESS [7.927s]
Aug 28, 2013 10:52:37 PM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary
INFO: Apache cTAKES dictionary lookup ................... FAILURE [8.854s]
Aug 28, 2013 10:52:37 PM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary
INFO: Apache cTAKES context dependent tokenizer ......... SKIPPED
Aug 28, 2013 10:52:37 PM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary
INFO: Apache cTAKES Resources lvg ....................... SKIPPED
Aug 28, 2013 10:52:37 PM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary
INFO: Apache cTAKES LVG lexical tools ................... SKIPPED
Aug 28, 2013 10:52:37 PM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary
INFO: Apache cTAKES Resources ne-contexts ............... SKIPPED
Aug 28, 2013 10:52:37 PM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary
INFO: Apache cTAKES named entity contexts ............... SKIPPED
Aug 28, 2013 10:52:37 PM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary
INFO: Apache cTAKES Resources constituency-parser ....... SKIPPED
Aug 28, 2013 10:52:37 PM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary
INFO: Apache cTAKES Constituency Parser ................. SKIPPED
Aug 28, 2013 10:52:37 PM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary
INFO: Apache cTAKES Resources coreference ............... SKIPPED
Aug 28, 2013 10:52:37 PM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary
INFO: Apache cTAKES Resources relation-extractor ........ SKIPPED
Aug 28, 2013 10:52:37 PM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary
INFO: Apache cTAKES Resources dependency-parser ......... SKIPPED
Aug 28, 2013 10:52:37 PM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary
INFO: Apache cTAKES Dependency Parser ................... SKIPPED
Aug 28, 2013 10:52:37 PM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary
INFO: Apache cTAKES Relation Extractor .................. SKIPPED
Aug 28, 2013 10:52:37 PM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary
INFO: Apache cTAKES CoReference Resolver ................ SKIPPED
Aug 28, 2013 10:52:37 PM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary
INFO: Apache cTAKES Resources drug-ner .................. SKIPPED
Aug 28, 2013 10:52:37 PM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary
INFO: Apache cTAKES Drug NER ............................ SKIPPED
Aug 28, 2013 10:52:37 PM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary
INFO: Apache cTAKES Resources side-effect ............... SKIPPED
Aug 28, 2013 10:52:37 PM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary
INFO: Apache cTAKES Side Effects ........................ SKIPPED
Aug 28, 2013 10:52:37 PM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary
INFO: Apache cTAKES Resources smoking-status ............ SKIPPED
Aug 28, 2013 10:52:37 PM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary
INFO: Apache cTAKES Smoking Status ...................... SKIPPED
Aug 28, 2013 10:52:37 PM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary
INFO: Apache cTAKES Resources pad-term-spotter-res ...... SKIPPED
Aug 28, 2013 10:52:37 PM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary
INFO: Apache cTAKES Pad Term Spotter .................... SKIPPED
Aug 28, 2013 10:52:37 PM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary
INFO: Apache cTAKES Resources assertion ................. SKIPPED
Aug 28, 2013 10:52:37 PM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary
INFO: Apache cTAKES Resources assertion-zoner ........... SKIPPED
Aug 28, 2013 10:52:37 PM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary
INFO: Apache cTAKES Assertion's zoner ................... SKIPPED
Aug 28, 2013 10:52:37 PM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary
INFO: Apache cTAKES Assertion ........................... SKIPPED
Aug 28, 2013 10:52:37 PM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary
INFO: Apache cTAKES Resources temporal .................. SKIPPED
Aug 28, 2013 10:52:37 PM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary
INFO: Apache cTAKES Temporal Information Extraction ..... SKIPPED
Aug 28, 2013 10:52:37 PM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary
INFO: Apache cTAKES ctakes-clinical-pipeline ............ SKIPPED
Aug 28, 2013 10:52:37 PM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary
INFO: Apache cTAKES Distribution ........................ SKIPPED
Aug 28, 2013 10:52:37 PM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary
INFO: Apache cTAKES Regression-test ..................... SKIPPED
Aug 28, 2013 10:52:37 PM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary
INFO: Apache cTAKES Resources dictionary-lookup ......... SKIPPED
Aug 28, 2013 10:52:37 PM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary
INFO: Apache cTAKES template filler ..................... SKIPPED
Aug 28, 2013 10:52:37 PM org.apache.maven.cli.event.ExecutionEventLogger logReactorSummary
INFO: ctakes-examples ................................... SKIPPED
Aug 28, 2013 10:52:37 PM org.apache.maven.cli.event.ExecutionEventLogger logResult
INFO: ------------------------------------------------------------------------
Aug 28, 2013 10:52:37 PM org.apache.maven.cli.event.ExecutionEventLogger logResult
INFO: BUILD FAILURE
Aug 28, 2013 10:52:37 PM org.apache.maven.cli.event.ExecutionEventLogger logStats
INFO: ------------------------------------------------------------------------
Aug 28, 2013 10:52:37 PM org.apache.maven.cli.event.ExecutionEventLogger logStats
INFO: Total time: 2:18.799s
Aug 28, 2013 10:52:37 PM org.apache.maven.cli.event.ExecutionEventLogger logStats
INFO: Finished at: Wed Aug 28 22:52:37 UTC 2013
Aug 28, 2013 10:52:37 PM org.apache.maven.cli.event.ExecutionEventLogger logStats
INFO: Final Memory: 27M/121M
Aug 28, 2013 10:52:37 PM org.apache.maven.cli.event.ExecutionEventLogger sessionEnded
INFO: ------------------------------------------------------------------------
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