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From Apache Jenkins Server <jenk...@builds.apache.org>
Subject Build failed in Jenkins: ctakes-trunk-package #168
Date Sat, 24 Aug 2013 11:47:59 GMT
See <https://builds.apache.org/job/ctakes-trunk-package/168/changes>

Changes:

[chenpei] CTAKES-223 - Thanks John Green for contributing the sample clinical notes.  Added
additional notes to the ctakes-examples project.

------------------------------------------
[...truncated 1758 lines...]
INFO: --- maven-compiler-plugin:2.4:compile (default-compile) @ ctakes-constituency-parser-res
---
[INFO] No sources to compile
Aug 24, 2013 11:46:47 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: 
Aug 24, 2013 11:46:47 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: --- maven-resources-plugin:2.5:testResources (default-testResources) @ ctakes-constituency-parser-res
---
[debug] execute contextualize
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] skip non existing resourceDirectory <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-constituency-parser-res/src/test/resources>
[INFO] Copying 3 resources
Aug 24, 2013 11:46:47 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: 
Aug 24, 2013 11:46:47 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: --- maven-compiler-plugin:2.4:testCompile (default-testCompile) @ ctakes-constituency-parser-res
---
[INFO] No sources to compile
Aug 24, 2013 11:46:47 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: 
Aug 24, 2013 11:46:47 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: --- maven-surefire-plugin:2.12:test (default-test) @ ctakes-constituency-parser-res
---
[INFO] Tests are skipped.
Aug 24, 2013 11:46:47 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: 
Aug 24, 2013 11:46:47 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: --- maven-jar-plugin:2.4:jar (default-jar) @ ctakes-constituency-parser-res ---
[INFO] Building jar: <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-constituency-parser-res/target/ctakes-constituency-parser-res-3.1.0-SNAPSHOT.jar>
Aug 24, 2013 11:46:47 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: 
Aug 24, 2013 11:46:47 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: --- maven-site-plugin:3.1:attach-descriptor (attach-descriptor) @ ctakes-constituency-parser-res
---
Aug 24, 2013 11:46:48 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: 
Aug 24, 2013 11:46:48 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: --- maven-install-plugin:2.3.1:install (default-install) @ ctakes-constituency-parser-res
---
[INFO] Installing <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-constituency-parser-res/target/ctakes-constituency-parser-res-3.1.0-SNAPSHOT.jar>
to /home/jenkins/jenkins-slave/maven-repositories/1/org/apache/ctakes/ctakes-constituency-parser-res/3.1.0-SNAPSHOT/ctakes-constituency-parser-res-3.1.0-SNAPSHOT.jar
[INFO] Installing <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-constituency-parser-res/pom.xml>
to /home/jenkins/jenkins-slave/maven-repositories/1/org/apache/ctakes/ctakes-constituency-parser-res/3.1.0-SNAPSHOT/ctakes-constituency-parser-res-3.1.0-SNAPSHOT.pom
Aug 24, 2013 11:46:53 AM org.apache.maven.cli.event.ExecutionEventLogger projectStarted
INFO:                                                                         
Aug 24, 2013 11:46:53 AM org.apache.maven.cli.event.ExecutionEventLogger projectStarted
INFO: ------------------------------------------------------------------------
Aug 24, 2013 11:46:53 AM org.apache.maven.cli.event.ExecutionEventLogger projectStarted
INFO: Building Apache cTAKES Constituency Parser 3.1.0-SNAPSHOT
Aug 24, 2013 11:46:53 AM org.apache.maven.cli.event.ExecutionEventLogger projectStarted
INFO: ------------------------------------------------------------------------
Aug 24, 2013 11:46:53 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: 
Aug 24, 2013 11:46:53 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: --- maven-clean-plugin:2.4.1:clean (default-clean) @ ctakes-constituency-parser ---
[INFO] Deleting <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-constituency-parser/target>
Aug 24, 2013 11:46:53 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: 
Aug 24, 2013 11:46:53 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: --- maven-remote-resources-plugin:1.4:process (default) @ ctakes-constituency-parser
---
Downloading: http://repo.maven.apache.org/maven2/jwnl/jwnl/1.3.3/jwnl-1.3.3.pom
Aug 24, 2013 11:46:53 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: 
Aug 24, 2013 11:46:53 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: --- maven-resources-plugin:2.5:resources (default-resources) @ ctakes-constituency-parser
---
[debug] execute contextualize
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] Copying 1 resource
[INFO] Copying 3 resources
Aug 24, 2013 11:46:54 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: 
Aug 24, 2013 11:46:54 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: --- jcasgen-maven-plugin:0.9.3:generate (default) @ ctakes-constituency-parser ---
[INFO] JCasGen: Output going to '<https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-constituency-parser/target/generated-sources/jcasgen'>
[INFO] JCasGen: Reading the XML TAE descriptor, and creating types, for xml input file '<https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-constituency-parser/src/main/resources/org/apache/ctakes/constituency/parser/types/LabeledTree.xml'.>
[INFO] JCasGen: Creating: 'org.apache.ctakes.constituency.parser.uima.type.BooleanLabeledTree'.
[INFO] JCasGen: Creating: 'org.apache.ctakes.constituency.parser.uima.type.BooleanLabeledTree_Type'.
Aug 24, 2013 11:46:54 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: 
Aug 24, 2013 11:46:54 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: --- maven-compiler-plugin:2.4:compile (default-compile) @ ctakes-constituency-parser
---
[INFO] Compiling 12 source files to <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-constituency-parser/target/classes>
[WARNING] <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-constituency-parser/src/main/java/org/apache/ctakes/constituency/parser/ae/ConstituencyParser.java>:[52,47]
[deprecation] locateFile(java.lang.String) in org.apache.ctakes.core.resource.FileLocator
has been deprecated
Aug 24, 2013 11:46:54 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: 
Aug 24, 2013 11:46:54 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: --- maven-resources-plugin:2.5:testResources (default-testResources) @ ctakes-constituency-parser
---
[debug] execute contextualize
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] skip non existing resourceDirectory <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-constituency-parser/src/test/resources>
[INFO] Copying 3 resources
Aug 24, 2013 11:46:54 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: 
Aug 24, 2013 11:46:54 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: --- maven-compiler-plugin:2.4:testCompile (default-testCompile) @ ctakes-constituency-parser
---
[INFO] No sources to compile
Aug 24, 2013 11:46:54 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: 
Aug 24, 2013 11:46:54 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: --- maven-surefire-plugin:2.12:test (default-test) @ ctakes-constituency-parser ---
[INFO] Tests are skipped.
Aug 24, 2013 11:46:54 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: 
Aug 24, 2013 11:46:54 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: --- maven-jar-plugin:2.4:jar (default-jar) @ ctakes-constituency-parser ---
[INFO] Building jar: <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-constituency-parser/target/ctakes-constituency-parser-3.1.0-SNAPSHOT.jar>
Aug 24, 2013 11:46:54 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: 
Aug 24, 2013 11:46:54 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: --- maven-site-plugin:3.1:attach-descriptor (attach-descriptor) @ ctakes-constituency-parser
---
Aug 24, 2013 11:46:55 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: 
Aug 24, 2013 11:46:55 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: --- maven-install-plugin:2.3.1:install (default-install) @ ctakes-constituency-parser
---
[INFO] Installing <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-constituency-parser/target/ctakes-constituency-parser-3.1.0-SNAPSHOT.jar>
to /home/jenkins/jenkins-slave/maven-repositories/1/org/apache/ctakes/ctakes-constituency-parser/3.1.0-SNAPSHOT/ctakes-constituency-parser-3.1.0-SNAPSHOT.jar
[INFO] Installing <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-constituency-parser/pom.xml>
to /home/jenkins/jenkins-slave/maven-repositories/1/org/apache/ctakes/ctakes-constituency-parser/3.1.0-SNAPSHOT/ctakes-constituency-parser-3.1.0-SNAPSHOT.pom
Aug 24, 2013 11:46:57 AM org.apache.maven.cli.event.ExecutionEventLogger projectStarted
INFO:                                                                         
Aug 24, 2013 11:46:57 AM org.apache.maven.cli.event.ExecutionEventLogger projectStarted
INFO: ------------------------------------------------------------------------
Aug 24, 2013 11:46:57 AM org.apache.maven.cli.event.ExecutionEventLogger projectStarted
INFO: Building Apache cTAKES Resources coreference 3.1.0-SNAPSHOT
Aug 24, 2013 11:46:57 AM org.apache.maven.cli.event.ExecutionEventLogger projectStarted
INFO: ------------------------------------------------------------------------
Aug 24, 2013 11:46:57 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: 
Aug 24, 2013 11:46:57 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: --- maven-clean-plugin:2.4.1:clean (default-clean) @ ctakes-coreference-res ---
[INFO] Deleting <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-coreference-res/target>
Aug 24, 2013 11:46:57 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: 
Aug 24, 2013 11:46:57 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: --- maven-remote-resources-plugin:1.4:process (default) @ ctakes-coreference-res ---
Aug 24, 2013 11:46:57 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: 
Aug 24, 2013 11:46:57 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: --- maven-resources-plugin:2.5:resources (default-resources) @ ctakes-coreference-res
---
[debug] execute contextualize
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] Copying 30 resources
[INFO] Copying 3 resources
Aug 24, 2013 11:46:57 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: 
Aug 24, 2013 11:46:57 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: --- maven-compiler-plugin:2.4:compile (default-compile) @ ctakes-coreference-res ---
[INFO] No sources to compile
Aug 24, 2013 11:46:58 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: 
Aug 24, 2013 11:46:58 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: --- maven-resources-plugin:2.5:testResources (default-testResources) @ ctakes-coreference-res
---
[debug] execute contextualize
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] skip non existing resourceDirectory <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-coreference-res/src/test/resources>
[INFO] Copying 3 resources
Aug 24, 2013 11:46:58 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: 
Aug 24, 2013 11:46:58 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: --- maven-compiler-plugin:2.4:testCompile (default-testCompile) @ ctakes-coreference-res
---
[INFO] No sources to compile
Aug 24, 2013 11:46:58 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: 
Aug 24, 2013 11:46:58 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: --- maven-surefire-plugin:2.12:test (default-test) @ ctakes-coreference-res ---
[INFO] Tests are skipped.
Aug 24, 2013 11:46:58 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: 
Aug 24, 2013 11:46:58 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: --- maven-jar-plugin:2.4:jar (default-jar) @ ctakes-coreference-res ---
[INFO] Building jar: <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-coreference-res/target/ctakes-coreference-res-3.1.0-SNAPSHOT.jar>
Aug 24, 2013 11:46:58 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: 
Aug 24, 2013 11:46:58 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: --- maven-site-plugin:3.1:attach-descriptor (attach-descriptor) @ ctakes-coreference-res
---
Aug 24, 2013 11:46:58 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: 
Aug 24, 2013 11:46:58 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: --- maven-install-plugin:2.3.1:install (default-install) @ ctakes-coreference-res ---
[INFO] Installing <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-coreference-res/target/ctakes-coreference-res-3.1.0-SNAPSHOT.jar>
to /home/jenkins/jenkins-slave/maven-repositories/1/org/apache/ctakes/ctakes-coreference-res/3.1.0-SNAPSHOT/ctakes-coreference-res-3.1.0-SNAPSHOT.jar
[INFO] Installing <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-coreference-res/pom.xml>
to /home/jenkins/jenkins-slave/maven-repositories/1/org/apache/ctakes/ctakes-coreference-res/3.1.0-SNAPSHOT/ctakes-coreference-res-3.1.0-SNAPSHOT.pom
Aug 24, 2013 11:47:01 AM org.apache.maven.cli.event.ExecutionEventLogger projectStarted
INFO:                                                                         
Aug 24, 2013 11:47:01 AM org.apache.maven.cli.event.ExecutionEventLogger projectStarted
INFO: ------------------------------------------------------------------------
Aug 24, 2013 11:47:01 AM org.apache.maven.cli.event.ExecutionEventLogger projectStarted
INFO: Building Apache cTAKES Resources relation-extractor 3.1.0-SNAPSHOT
Aug 24, 2013 11:47:01 AM org.apache.maven.cli.event.ExecutionEventLogger projectStarted
INFO: ------------------------------------------------------------------------
Aug 24, 2013 11:47:01 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: 
Aug 24, 2013 11:47:01 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: --- maven-clean-plugin:2.4.1:clean (default-clean) @ ctakes-relation-extractor-res ---
[INFO] Deleting <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-relation-extractor-res/target>
Aug 24, 2013 11:47:01 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: 
Aug 24, 2013 11:47:01 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: --- maven-remote-resources-plugin:1.4:process (default) @ ctakes-relation-extractor-res
---
Aug 24, 2013 11:47:01 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: 
Aug 24, 2013 11:47:01 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: --- maven-resources-plugin:2.5:resources (default-resources) @ ctakes-relation-extractor-res
---
[debug] execute contextualize
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] Copying 4 resources
[INFO] Copying 3 resources
Aug 24, 2013 11:47:02 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: 
Aug 24, 2013 11:47:02 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: --- maven-compiler-plugin:2.4:compile (default-compile) @ ctakes-relation-extractor-res
---
[INFO] No sources to compile
Aug 24, 2013 11:47:02 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: 
Aug 24, 2013 11:47:02 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: --- maven-resources-plugin:2.5:testResources (default-testResources) @ ctakes-relation-extractor-res
---
[debug] execute contextualize
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] skip non existing resourceDirectory <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-relation-extractor-res/src/test/resources>
[INFO] Copying 3 resources
Aug 24, 2013 11:47:02 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: 
Aug 24, 2013 11:47:02 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: --- maven-compiler-plugin:2.4:testCompile (default-testCompile) @ ctakes-relation-extractor-res
---
[INFO] No sources to compile
Aug 24, 2013 11:47:02 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: 
Aug 24, 2013 11:47:02 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: --- maven-surefire-plugin:2.12:test (default-test) @ ctakes-relation-extractor-res ---
[INFO] Tests are skipped.
Aug 24, 2013 11:47:02 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: 
Aug 24, 2013 11:47:02 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: --- maven-jar-plugin:2.4:jar (default-jar) @ ctakes-relation-extractor-res ---
[INFO] Building jar: <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-relation-extractor-res/target/ctakes-relation-extractor-res-3.1.0-SNAPSHOT.jar>
Aug 24, 2013 11:47:02 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: 
Aug 24, 2013 11:47:02 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: --- maven-site-plugin:3.1:attach-descriptor (attach-descriptor) @ ctakes-relation-extractor-res
---
Aug 24, 2013 11:47:02 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: 
Aug 24, 2013 11:47:02 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: --- maven-install-plugin:2.3.1:install (default-install) @ ctakes-relation-extractor-res
---
[INFO] Installing <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-relation-extractor-res/target/ctakes-relation-extractor-res-3.1.0-SNAPSHOT.jar>
to /home/jenkins/jenkins-slave/maven-repositories/1/org/apache/ctakes/ctakes-relation-extractor-res/3.1.0-SNAPSHOT/ctakes-relation-extractor-res-3.1.0-SNAPSHOT.jar
[INFO] Installing <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-relation-extractor-res/pom.xml>
to /home/jenkins/jenkins-slave/maven-repositories/1/org/apache/ctakes/ctakes-relation-extractor-res/3.1.0-SNAPSHOT/ctakes-relation-extractor-res-3.1.0-SNAPSHOT.pom
Aug 24, 2013 11:47:04 AM org.apache.maven.cli.event.ExecutionEventLogger projectStarted
INFO:                                                                         
Aug 24, 2013 11:47:04 AM org.apache.maven.cli.event.ExecutionEventLogger projectStarted
INFO: ------------------------------------------------------------------------
Aug 24, 2013 11:47:04 AM org.apache.maven.cli.event.ExecutionEventLogger projectStarted
INFO: Building Apache cTAKES Resources dependency-parser 3.1.0-SNAPSHOT
Aug 24, 2013 11:47:04 AM org.apache.maven.cli.event.ExecutionEventLogger projectStarted
INFO: ------------------------------------------------------------------------
Aug 24, 2013 11:47:04 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: 
Aug 24, 2013 11:47:04 AM org.apache.maven.cli.event.ExecutionEventLogger mojoStarted
INFO: --- maven-clean-plugin:2.4.1:clean (default-clean) @ ctakes-dependency-parser-res ---
[INFO] Deleting <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-dependency-parser-res/target>
ERROR: Maven JVM terminated unexpectedly with exit code 143


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