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From "douglas song (JIRA)" <j...@apache.org>
Subject [jira] [Commented] (CTAKES-48) negation annotator - Sentence type used in code not in descr
Date Mon, 17 Jun 2013 18:05:24 GMT

    [ https://issues.apache.org/jira/browse/CTAKES-48?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=13685783#comment-13685783
] 

douglas song commented on CTAKES-48:
------------------------------------

Hi Pei,

Thanks for the temp work around. It does work. 
I got the error while using both DrugMentionAnnotator.xml and DrugCNP2LookupWindow.xml in
cTakes 3.0 Drug ner Desc.

Thanks.
                
> negation annotator - Sentence type used in code not in descr
> ------------------------------------------------------------
>
>                 Key: CTAKES-48
>                 URL: https://issues.apache.org/jira/browse/CTAKES-48
>             Project: cTAKES
>          Issue Type: Improvement
>            Reporter: Pei Chen
>            Priority: Minor
>
> Found at the SHARPn summit/f2f:
> tried to run the negation annotator by itself and this error was thrown:
> Caused by: org.apache.uima.cas.CASRuntimeException: JCas type "edu.mayo.bmi.uima.core.type.textspan.Sentence"
used in Java code, but was not declared in the XML type descriptor.
> at org.apache.uima.jcas.impl.JCasImpl.getType(JCasImpl.java:412)
> at org.apache.uima.jcas.impl.JCasImpl.getCasType(JCasImpl.java:436)
> at org.apache.uima.jcas.impl.JCasImpl.getAnnotationIndex(JCasImpl.java:1531)
> at edu.mayo.bmi.uima.context.ContextAnnotator.process(ContextAnnotator.java:2

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