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From Apache Jenkins Server <jenk...@builds.apache.org>
Subject Build failed in Jenkins: ctakes-trunk-package #106
Date Thu, 16 May 2013 06:43:10 GMT
See <https://builds.apache.org/job/ctakes-trunk-package/106/changes>

Changes:

[tmill] Addresses ctakes-195. Two new models for the parser, one trained on sharp seed (1.5),
one on all sharp (3.1), and the default changed to 3.1.

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[INFO] [INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] skip non existing resourceDirectory <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion-zoner-res/src/test/resources>
[INFO] Copying 3 resources

[INFO] --- maven-resources-plugin:2.5:testResources (default-testResources) @ ctakes-assertion-zoner-res
---
[INFO] [INFO] No sources to compile

[INFO] --- maven-compiler-plugin:2.4:testCompile (default-testCompile) @ ctakes-assertion-zoner-res
---
[INFO] [INFO] Tests are skipped.

[INFO] --- maven-surefire-plugin:2.12:test (default-test) @ ctakes-assertion-zoner-res ---
[INFO] [INFO] Building jar: <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion-zoner-res/target/ctakes-assertion-zoner-res-3.1.0-SNAPSHOT.jar>

[INFO] --- maven-jar-plugin:2.4:jar (default-jar) @ ctakes-assertion-zoner-res ---
[INFO] 
[INFO] --- maven-site-plugin:3.1:attach-descriptor (attach-descriptor) @ ctakes-assertion-zoner-res
---
[INFO] Installing <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion-zoner-res/target/ctakes-assertion-zoner-res-3.1.0-SNAPSHOT.jar>
to /home/jenkins/jenkins-slave/maven-repositories/1/org/apache/ctakes/ctakes-assertion-zoner-res/3.1.0-SNAPSHOT/ctakes-assertion-zoner-res-3.1.0-SNAPSHOT.jar
[INFO] [INFO] Installing <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion-zoner-res/pom.xml>
to /home/jenkins/jenkins-slave/maven-repositories/1/org/apache/ctakes/ctakes-assertion-zoner-res/3.1.0-SNAPSHOT/ctakes-assertion-zoner-res-3.1.0-SNAPSHOT.pom

[INFO] --- maven-install-plugin:2.3.1:install (default-install) @ ctakes-assertion-zoner-res
---
[INFO]                                                                         
[INFO] ------------------------------------------------------------------------
[INFO] Building Apache cTAKES Assertion's zoner 3.1.0-SNAPSHOT
[INFO] ------------------------------------------------------------------------
[INFO] Deleting <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion-zoner/target>
[INFO] 
[INFO] --- maven-clean-plugin:2.4.1:clean (default-clean) @ ctakes-assertion-zoner ---
[INFO] 
Downloading: http://repo.maven.apache.org/maven2/jwnl/jwnl/1.3.3/jwnl-1.3.3.pom
[INFO] --- maven-remote-resources-plugin:1.3:process (default) @ ctakes-assertion-zoner ---
[INFO] [debug] execute contextualize
[INFO] Using 'UTF-8' encoding to copy filtered resources.

[INFO] --- maven-resources-plugin:2.5:resources (default-resources) @ ctakes-assertion-zoner
---
[INFO] Copying 1 resource
[INFO] Copying 3 resources
[INFO] [INFO] JCasGen: Output going to '<https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion-zoner/target/generated-sources/jcasgen'>
[INFO] JCasGen: Reading the XML TAE descriptor, and creating types, for xml input file '<https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion-zoner/src/main/resources/org/apache/ctakes/assertion/zoner/types/TypeSystem.xml'.>
[INFO] JCasGen: Creating: 'org.apache.ctakes.assertion.zoner.types.Heading'.
[INFO] JCasGen: Creating: 'org.apache.ctakes.assertion.zoner.types.Heading_Type'.
[INFO] JCasGen: Creating: 'org.apache.ctakes.assertion.zoner.types.Subzone'.
[INFO] JCasGen: Creating: 'org.apache.ctakes.assertion.zoner.types.Subzone_Type'.
[INFO] JCasGen: Creating: 'org.apache.ctakes.assertion.zoner.types.Zone'.
[INFO] JCasGen: Creating: 'org.apache.ctakes.assertion.zoner.types.Zone_Type'.

[INFO] --- jcasgen-maven-plugin:0.9.3:generate (default) @ ctakes-assertion-zoner ---
[INFO] [INFO] Compiling 8 source files to <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion-zoner/target/classes>

[INFO] --- maven-compiler-plugin:2.4:compile (default-compile) @ ctakes-assertion-zoner ---
[debug] execute contextualize
[INFO] [INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] skip non existing resourceDirectory <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion-zoner/src/test/resources>
[INFO] Copying 3 resources

[INFO] --- maven-resources-plugin:2.5:testResources (default-testResources) @ ctakes-assertion-zoner
---
[INFO] [INFO] No sources to compile

[INFO] --- maven-compiler-plugin:2.4:testCompile (default-testCompile) @ ctakes-assertion-zoner
---
[INFO] [INFO] Tests are skipped.

[INFO] --- maven-surefire-plugin:2.12:test (default-test) @ ctakes-assertion-zoner ---
[INFO] [INFO] Building jar: <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion-zoner/target/ctakes-assertion-zoner-3.1.0-SNAPSHOT.jar>

[INFO] --- maven-jar-plugin:2.4:jar (default-jar) @ ctakes-assertion-zoner ---
[INFO] 
[INFO] --- maven-site-plugin:3.1:attach-descriptor (attach-descriptor) @ ctakes-assertion-zoner
---
[INFO] Installing <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion-zoner/target/ctakes-assertion-zoner-3.1.0-SNAPSHOT.jar>
to /home/jenkins/jenkins-slave/maven-repositories/1/org/apache/ctakes/ctakes-assertion-zoner/3.1.0-SNAPSHOT/ctakes-assertion-zoner-3.1.0-SNAPSHOT.jar
[INFO] [INFO] Installing <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion-zoner/pom.xml>
to /home/jenkins/jenkins-slave/maven-repositories/1/org/apache/ctakes/ctakes-assertion-zoner/3.1.0-SNAPSHOT/ctakes-assertion-zoner-3.1.0-SNAPSHOT.pom

[INFO] --- maven-install-plugin:2.3.1:install (default-install) @ ctakes-assertion-zoner ---
[INFO]                                                                         
[INFO] ------------------------------------------------------------------------
[INFO] Building Apache cTAKES Assertion 3.1.0-SNAPSHOT
[INFO] ------------------------------------------------------------------------
Downloading: http://cleartk.googlecode.com/svn/repo/com/googlecode/clearparser/clearparser/0.4.0-SNAPSHOT/maven-metadata.xml
Downloading: https://oss.sonatype.org/content/repositories/snapshots/com/googlecode/clearparser/clearparser/0.4.0-SNAPSHOT/maven-metadata.xml
Downloading: http://repository.apache.org/snapshots/com/googlecode/clearparser/clearparser/0.4.0-SNAPSHOT/maven-metadata.xml
Downloaded: http://cleartk.googlecode.com/svn/repo/com/googlecode/clearparser/clearparser/0.4.0-SNAPSHOT/maven-metadata.xml
(2 KB at 3.5 KB/sec)
[INFO] [INFO] Deleting <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion/target>

[INFO] --- maven-clean-plugin:2.4.1:clean (default-clean) @ ctakes-assertion ---
[INFO] 
[INFO] --- maven-remote-resources-plugin:1.3:process (default) @ ctakes-assertion ---
Downloading: http://repo.maven.apache.org/maven2/jwnl/jwnl/1.3.3/jwnl-1.3.3.pom
Downloading: http://repository.apache.org/snapshots/com/googlecode/clearparser/clearparser/0.4.0-SNAPSHOT/clearparser-0.4.0-SNAPSHOT.pom
[debug] execute contextualize
[INFO] [INFO] Using 'UTF-8' encoding to copy filtered resources.

[INFO] --- maven-resources-plugin:2.5:resources (default-resources) @ ctakes-assertion ---
[INFO] Copying 1 resource
[INFO] Copying 3 resources
[INFO] [INFO] JCasGen: Output going to '<https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion/target/generated-sources/jcasgen'>
[INFO] JCasGen: Reading the XML TAE descriptor, and creating types, for xml input file '<https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion/src/main/resources/org/apache/ctakes/assertion/types/TypeSystem.xml'.>
[INFO] JCasGen: Creating: 'org.apache.ctakes.assertion.medfacts.types.Assertion'.
[INFO] JCasGen: Creating: 'org.apache.ctakes.assertion.medfacts.types.Assertion_Type'.
[INFO] JCasGen: Creating: 'org.apache.ctakes.assertion.medfacts.types.Concept'.
[INFO] JCasGen: Creating: 'org.apache.ctakes.assertion.medfacts.types.Concept_Type'.

[INFO] --- jcasgen-maven-plugin:0.9.3:generate (default) @ ctakes-assertion ---
[INFO] 
[INFO] --- maven-compiler-plugin:2.4:compile (default-compile) @ ctakes-assertion ---
[INFO] Compiling 58 source files to <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion/target/classes>
[WARNING] <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion/src/main/java/org/apache/ctakes/assertion/medfacts/cleartk/AssertionCleartkAnalysisEngine.java>:[48,47]
[deprecation] org.cleartk.classifier.feature.extractor.ContextExtractor in org.cleartk.classifier.feature.extractor
has been deprecated
[WARNING] <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion/src/main/java/org/apache/ctakes/assertion/medfacts/cleartk/AssertionCleartkAnalysisEngine.java>:[49,47]
[deprecation] org.cleartk.classifier.feature.extractor.ContextExtractor in org.cleartk.classifier.feature.extractor
has been deprecated
[WARNING] <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion/src/main/java/org/apache/ctakes/assertion/medfacts/cleartk/AssertionCleartkAnalysisEngine.java>:[49,47]
[deprecation] org.cleartk.classifier.feature.extractor.ContextExtractor in org.cleartk.classifier.feature.extractor
has been deprecated
[WARNING] <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion/src/main/java/org/apache/ctakes/assertion/medfacts/cleartk/AssertionCleartkAnalysisEngine.java>:[50,47]
[deprecation] org.cleartk.classifier.feature.extractor.ContextExtractor in org.cleartk.classifier.feature.extractor
has been deprecated
[WARNING] <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion/src/main/java/org/apache/ctakes/assertion/medfacts/cleartk/AssertionCleartkAnalysisEngine.java>:[50,47]
[deprecation] org.cleartk.classifier.feature.extractor.ContextExtractor in org.cleartk.classifier.feature.extractor
has been deprecated
[WARNING] <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion/src/main/java/org/apache/ctakes/assertion/medfacts/cleartk/AssertionCleartkAnalysisEngine.java>:[54,54]
[deprecation] org.cleartk.classifier.feature.extractor.simple.SpannedTextExtractor in org.cleartk.classifier.feature.extractor.simple
has been deprecated
[WARNING] <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion/src/main/java/org/apache/ctakes/assertion/medfacts/cleartk/AssertionCleartkAnalysisEngine.java>:[56,49]
[deprecation] org.cleartk.classifier.feature.proliferate.CapitalTypeProliferator in org.cleartk.classifier.feature.proliferate
has been deprecated
[WARNING] <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion/src/main/java/org/apache/ctakes/assertion/medfacts/cleartk/AssertionCleartkAnalysisEngine.java>:[57,49]
[deprecation] org.cleartk.classifier.feature.proliferate.CharacterNGramProliferator in org.cleartk.classifier.feature.proliferate
has been deprecated
[WARNING] <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion/src/main/java/org/apache/ctakes/assertion/medfacts/cleartk/AssertionCleartkAnalysisEngine.java>:[58,49]
[deprecation] org.cleartk.classifier.feature.proliferate.LowerCaseProliferator in org.cleartk.classifier.feature.proliferate
has been deprecated
[WARNING] <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion/src/main/java/org/apache/ctakes/assertion/medfacts/cleartk/AssertionCleartkAnalysisEngine.java>:[59,49]
[deprecation] org.cleartk.classifier.feature.proliferate.NumericTypeProliferator in org.cleartk.classifier.feature.proliferate
has been deprecated
[WARNING] <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion/src/main/java/org/apache/ctakes/assertion/medfacts/cleartk/AssertionCleartkAnalysisEngine.java>:[60,49]
[deprecation] org.cleartk.classifier.feature.proliferate.ProliferatingExtractor in org.cleartk.classifier.feature.proliferate
has been deprecated
[WARNING] <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion/src/main/java/org/apache/ctakes/assertion/medfacts/cleartk/AssertionCleartkAnalysisEngine.java>:[120,17]
[deprecation] org.cleartk.classifier.feature.extractor.ContextExtractor in org.cleartk.classifier.feature.extractor
has been deprecated
[WARNING] <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion/src/main/java/org/apache/ctakes/assertion/medfacts/cleartk/AssertionCleartkAnalysisEngine.java>:[121,17]
[deprecation] org.cleartk.classifier.feature.extractor.ContextExtractor in org.cleartk.classifier.feature.extractor
has been deprecated
[WARNING] <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion/src/main/java/org/apache/ctakes/assertion/medfacts/cleartk/SubjectCleartkAnalysisEngine.java>:[29,47]
[deprecation] org.cleartk.classifier.feature.extractor.ContextExtractor in org.cleartk.classifier.feature.extractor
has been deprecated
[WARNING] <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion/src/main/java/org/apache/ctakes/assertion/medfacts/cleartk/SubjectCleartkAnalysisEngine.java>:[30,47]
[deprecation] org.cleartk.classifier.feature.extractor.ContextExtractor in org.cleartk.classifier.feature.extractor
has been deprecated
[WARNING] <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion/src/main/java/org/apache/ctakes/assertion/medfacts/cleartk/SubjectCleartkAnalysisEngine.java>:[30,47]
[deprecation] org.cleartk.classifier.feature.extractor.ContextExtractor in org.cleartk.classifier.feature.extractor
has been deprecated
[WARNING] <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion/src/main/java/org/apache/ctakes/assertion/medfacts/cleartk/SubjectCleartkAnalysisEngine.java>:[31,47]
[deprecation] org.cleartk.classifier.feature.extractor.ContextExtractor in org.cleartk.classifier.feature.extractor
has been deprecated
[WARNING] <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion/src/main/java/org/apache/ctakes/assertion/medfacts/cleartk/SubjectCleartkAnalysisEngine.java>:[31,47]
[deprecation] org.cleartk.classifier.feature.extractor.ContextExtractor in org.cleartk.classifier.feature.extractor
has been deprecated
[WARNING] <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion/src/main/java/org/apache/ctakes/assertion/medfacts/cleartk/SubjectCleartkAnalysisEngine.java>:[32,47]
[deprecation] org.cleartk.classifier.feature.extractor.ContextExtractor in org.cleartk.classifier.feature.extractor
has been deprecated
[WARNING] <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion/src/main/java/org/apache/ctakes/assertion/medfacts/cleartk/SubjectCleartkAnalysisEngine.java>:[32,47]
[deprecation] org.cleartk.classifier.feature.extractor.ContextExtractor in org.cleartk.classifier.feature.extractor
has been deprecated
[WARNING] <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion/src/main/java/org/apache/ctakes/assertion/medfacts/cleartk/SubjectCleartkAnalysisEngine.java>:[34,54]
[deprecation] org.cleartk.classifier.feature.extractor.simple.SpannedTextExtractor in org.cleartk.classifier.feature.extractor.simple
has been deprecated
[WARNING] <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion/src/main/java/org/apache/ctakes/assertion/medfacts/cleartk/SubjectCleartkAnalysisEngine.java>:[36,49]
[deprecation] org.cleartk.classifier.feature.proliferate.CapitalTypeProliferator in org.cleartk.classifier.feature.proliferate
has been deprecated
[WARNING] <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion/src/main/java/org/apache/ctakes/assertion/medfacts/cleartk/SubjectCleartkAnalysisEngine.java>:[37,49]
[deprecation] org.cleartk.classifier.feature.proliferate.CharacterNGramProliferator in org.cleartk.classifier.feature.proliferate
has been deprecated
[WARNING] <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion/src/main/java/org/apache/ctakes/assertion/medfacts/cleartk/SubjectCleartkAnalysisEngine.java>:[38,49]
[deprecation] org.cleartk.classifier.feature.proliferate.LowerCaseProliferator in org.cleartk.classifier.feature.proliferate
has been deprecated
[WARNING] <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion/src/main/java/org/apache/ctakes/assertion/medfacts/cleartk/SubjectCleartkAnalysisEngine.java>:[39,49]
[deprecation] org.cleartk.classifier.feature.proliferate.NumericTypeProliferator in org.cleartk.classifier.feature.proliferate
has been deprecated
[WARNING] <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion/src/main/java/org/apache/ctakes/assertion/medfacts/cleartk/SubjectCleartkAnalysisEngine.java>:[40,49]
[deprecation] org.cleartk.classifier.feature.proliferate.ProliferatingExtractor in org.cleartk.classifier.feature.proliferate
has been deprecated
[WARNING] <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion/src/main/java/org/apache/ctakes/assertion/eval/AssertionEvaluation.java>:[78,37]
[deprecation] org.cleartk.classifier.opennlp.DefaultMaxentDataWriterFactory in org.cleartk.classifier.opennlp
has been deprecated
[WARNING] <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion/src/main/java/org/apache/ctakes/assertion/medfacts/cleartk/CreateAssertionDescriptor.java>:[21,37]
[deprecation] org.cleartk.classifier.opennlp.DefaultMaxentDataWriterFactory in org.cleartk.classifier.opennlp
has been deprecated
[WARNING] <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion/src/main/java/org/apache/ctakes/assertion/medfacts/cleartk/HistoryCleartkAnalysisEngine.java>:[31,47]
[deprecation] org.cleartk.classifier.feature.extractor.ContextExtractor in org.cleartk.classifier.feature.extractor
has been deprecated
[WARNING] <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion/src/main/java/org/apache/ctakes/assertion/medfacts/cleartk/GenericCleartkAnalysisEngine.java>:[30,47]
[deprecation] org.cleartk.classifier.feature.extractor.ContextExtractor in org.cleartk.classifier.feature.extractor
has been deprecated
[WARNING] <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion/src/main/java/org/apache/ctakes/assertion/medfacts/cleartk/AssertionSampleFeatureGenerator.java>:[8,54]
[deprecation] org.cleartk.classifier.feature.extractor.simple.SpannedTextExtractor in org.cleartk.classifier.feature.extractor.simple
has been deprecated
[WARNING] <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion/src/main/java/org/apache/ctakes/assertion/medfacts/cleartk/AssertionSampleFeatureGenerator.java>:[9,49]
[deprecation] org.cleartk.classifier.feature.proliferate.CapitalTypeProliferator in org.cleartk.classifier.feature.proliferate
has been deprecated
[WARNING] <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion/src/main/java/org/apache/ctakes/assertion/medfacts/cleartk/AssertionSampleFeatureGenerator.java>:[10,49]
[deprecation] org.cleartk.classifier.feature.proliferate.CharacterNGramProliferator in org.cleartk.classifier.feature.proliferate
has been deprecated
[WARNING] <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion/src/main/java/org/apache/ctakes/assertion/medfacts/cleartk/AssertionSampleFeatureGenerator.java>:[11,49]
[deprecation] org.cleartk.classifier.feature.proliferate.LowerCaseProliferator in org.cleartk.classifier.feature.proliferate
has been deprecated
[WARNING] <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion/src/main/java/org/apache/ctakes/assertion/medfacts/cleartk/AssertionSampleFeatureGenerator.java>:[12,49]
[deprecation] org.cleartk.classifier.feature.proliferate.NumericTypeProliferator in org.cleartk.classifier.feature.proliferate
has been deprecated
[WARNING] <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion/src/main/java/org/apache/ctakes/assertion/medfacts/cleartk/AssertionSampleFeatureGenerator.java>:[13,49]
[deprecation] org.cleartk.classifier.feature.proliferate.ProliferatingExtractor in org.cleartk.classifier.feature.proliferate
has been deprecated
[WARNING] <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion/src/main/java/org/apache/ctakes/assertion/medfacts/cleartk/TrainAssertionModel.java>:[41,29]
[deprecation] org.cleartk.classifier.CleartkAnnotatorDescriptionFactory in org.cleartk.classifier
has been deprecated
[WARNING] <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion/src/main/java/org/apache/ctakes/assertion/medfacts/cleartk/TrainAssertionModel.java>:[45,37]
[deprecation] org.cleartk.classifier.opennlp.DefaultMaxentDataWriterFactory in org.cleartk.classifier.opennlp
has been deprecated
[WARNING] <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion/src/main/java/org/apache/ctakes/assertion/medfacts/cleartk/TrainAssertionModel.java>:[46,37]
[deprecation] org.cleartk.classifier.opennlp.MaxentDataWriter in org.cleartk.classifier.opennlp
has been deprecated
[WARNING] <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion/src/main/java/org/apache/ctakes/assertion/medfacts/cleartk/SubjectCleartkAnalysisEngine.java>:[71,49]
[deprecation] org.cleartk.classifier.feature.extractor.ContextExtractor in org.cleartk.classifier.feature.extractor
has been deprecated
[WARNING] <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion/src/main/java/org/apache/ctakes/assertion/medfacts/cleartk/SubjectCleartkAnalysisEngine.java>:[74,8]
[deprecation] org.cleartk.classifier.feature.extractor.ContextExtractor in org.cleartk.classifier.feature.extractor
has been deprecated
[WARNING] <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion/src/main/java/org/apache/ctakes/assertion/eval/AssertionEvaluation.java>:[251,72]
[deprecation] org.cleartk.classifier.opennlp.DefaultMaxentDataWriterFactory in org.cleartk.classifier.opennlp
has been deprecated
[WARNING] <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion/src/main/java/org/apache/ctakes/assertion/eval/AssertionEvaluation.java>:[304,55]
[unchecked] unchecked call to addAll(org.cleartk.eval.AnnotationStatistics<OUTCOME_TYPE>)
as a member of the raw type org.cleartk.eval.AnnotationStatistics
[WARNING] <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion/src/main/java/org/apache/ctakes/assertion/eval/AssertionEvaluation.java>:[707,24]
[unchecked] unchecked call to <ANNOTATION_TYPE,SPAN_TYPE>add(java.util.Collection<?
extends ANNOTATION_TYPE>,java.util.Collection<? extends ANNOTATION_TYPE>,com.google.common.base.Function<ANNOTATION_TYPE,SPAN_TYPE>,com.google.common.base.Function<ANNOTATION_TYPE,OUTCOME_TYPE>)
as a member of the raw type org.cleartk.eval.AnnotationStatistics
[WARNING] <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion/src/main/java/org/apache/ctakes/assertion/eval/AssertionEvaluation.java>:[717,27]
[unchecked] unchecked call to <ANNOTATION_TYPE,SPAN_TYPE>add(java.util.Collection<?
extends ANNOTATION_TYPE>,java.util.Collection<? extends ANNOTATION_TYPE>,com.google.common.base.Function<ANNOTATION_TYPE,SPAN_TYPE>,com.google.common.base.Function<ANNOTATION_TYPE,OUTCOME_TYPE>)
as a member of the raw type org.cleartk.eval.AnnotationStatistics
[WARNING] <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion/src/main/java/org/apache/ctakes/assertion/eval/AssertionEvaluation.java>:[727,27]
[unchecked] unchecked call to <ANNOTATION_TYPE,SPAN_TYPE>add(java.util.Collection<?
extends ANNOTATION_TYPE>,java.util.Collection<? extends ANNOTATION_TYPE>,com.google.common.base.Function<ANNOTATION_TYPE,SPAN_TYPE>,com.google.common.base.Function<ANNOTATION_TYPE,OUTCOME_TYPE>)
as a member of the raw type org.cleartk.eval.AnnotationStatistics
[WARNING] <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion/src/main/java/org/apache/ctakes/assertion/eval/AssertionEvaluation.java>:[737,23]
[unchecked] unchecked call to <ANNOTATION_TYPE,SPAN_TYPE>add(java.util.Collection<?
extends ANNOTATION_TYPE>,java.util.Collection<? extends ANNOTATION_TYPE>,com.google.common.base.Function<ANNOTATION_TYPE,SPAN_TYPE>,com.google.common.base.Function<ANNOTATION_TYPE,OUTCOME_TYPE>)
as a member of the raw type org.cleartk.eval.AnnotationStatistics
[WARNING] <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion/src/main/java/org/apache/ctakes/assertion/eval/AssertionEvaluation.java>:[747,23]
[unchecked] unchecked call to <ANNOTATION_TYPE,SPAN_TYPE>add(java.util.Collection<?
extends ANNOTATION_TYPE>,java.util.Collection<? extends ANNOTATION_TYPE>,com.google.common.base.Function<ANNOTATION_TYPE,SPAN_TYPE>,com.google.common.base.Function<ANNOTATION_TYPE,OUTCOME_TYPE>)
as a member of the raw type org.cleartk.eval.AnnotationStatistics
[WARNING] <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion/src/main/java/org/apache/ctakes/assertion/eval/AssertionEvaluation.java>:[758,23]
[unchecked] unchecked call to <ANNOTATION_TYPE,SPAN_TYPE>add(java.util.Collection<?
extends ANNOTATION_TYPE>,java.util.Collection<? extends ANNOTATION_TYPE>,com.google.common.base.Function<ANNOTATION_TYPE,SPAN_TYPE>,com.google.common.base.Function<ANNOTATION_TYPE,OUTCOME_TYPE>)
as a member of the raw type org.cleartk.eval.AnnotationStatistics
[WARNING] <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion/src/main/java/org/apache/ctakes/assertion/medfacts/cleartk/CreateAssertionDescriptor.java>:[33,90]
[deprecation] org.cleartk.classifier.opennlp.DefaultMaxentDataWriterFactory in org.cleartk.classifier.opennlp
has been deprecated
[WARNING] <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion/src/main/java/org/apache/ctakes/assertion/medfacts/CasIndexer.java>:[74,21]
[unchecked] unchecked cast
found   : org.apache.uima.jcas.tcas.Annotation
required: T
[WARNING] <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion/src/main/java/org/apache/ctakes/assertion/medfacts/cleartk/HistoryCleartkAnalysisEngine.java>:[59,49]
[deprecation] org.cleartk.classifier.feature.extractor.ContextExtractor in org.cleartk.classifier.feature.extractor
has been deprecated
[WARNING] <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion/src/main/java/org/apache/ctakes/assertion/medfacts/cleartk/HistoryCleartkAnalysisEngine.java>:[62,8]
[deprecation] org.cleartk.classifier.feature.extractor.ContextExtractor in org.cleartk.classifier.feature.extractor
has been deprecated
[WARNING] <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion/src/main/java/org/apache/ctakes/assertion/pipelines/RunJudgeAttributeInstances.java>:[93,35]
[unchecked] unchecked conversion
found   : java.util.List
required: java.util.List<java.io.File>
[WARNING] <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion/src/main/java/org/apache/ctakes/assertion/cr/XmiCollectionReaderCtakes.java>:[81,18]
[unchecked] unchecked call to add(E) as a member of the raw type java.util.ArrayList
[WARNING] <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion/src/main/java/org/apache/ctakes/assertion/medfacts/cleartk/GenericCleartkAnalysisEngine.java>:[58,49]
[deprecation] org.cleartk.classifier.feature.extractor.ContextExtractor in org.cleartk.classifier.feature.extractor
has been deprecated
[WARNING] <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion/src/main/java/org/apache/ctakes/assertion/medfacts/cleartk/GenericCleartkAnalysisEngine.java>:[61,8]
[deprecation] org.cleartk.classifier.feature.extractor.ContextExtractor in org.cleartk.classifier.feature.extractor
has been deprecated
[WARNING] <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion/src/main/java/org/apache/ctakes/assertion/medfacts/cleartk/TrainAssertionModel.java>:[292,72]
[deprecation] org.cleartk.classifier.opennlp.DefaultMaxentDataWriterFactory in org.cleartk.classifier.opennlp
has been deprecated
[debug] execute contextualize
[INFO] [INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] skip non existing resourceDirectory <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion/src/test/resources>
[INFO] Copying 3 resources

[INFO] --- maven-resources-plugin:2.5:testResources (default-testResources) @ ctakes-assertion
---
[INFO] [INFO] No sources to compile

[INFO] --- maven-compiler-plugin:2.4:testCompile (default-testCompile) @ ctakes-assertion
---
[INFO] Tests are skipped.
[INFO] 
[INFO] --- maven-surefire-plugin:2.12:test (default-test) @ ctakes-assertion ---
[INFO] [INFO] Building jar: <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion/target/ctakes-assertion-3.1.0-SNAPSHOT.jar>

[INFO] --- maven-jar-plugin:2.4:jar (default-jar) @ ctakes-assertion ---
[INFO] 
[INFO] --- maven-site-plugin:3.1:attach-descriptor (attach-descriptor) @ ctakes-assertion
---
[INFO] [INFO] Installing <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion/target/ctakes-assertion-3.1.0-SNAPSHOT.jar>
to /home/jenkins/jenkins-slave/maven-repositories/1/org/apache/ctakes/ctakes-assertion/3.1.0-SNAPSHOT/ctakes-assertion-3.1.0-SNAPSHOT.jar
[INFO] Installing <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-assertion/pom.xml>
to /home/jenkins/jenkins-slave/maven-repositories/1/org/apache/ctakes/ctakes-assertion/3.1.0-SNAPSHOT/ctakes-assertion-3.1.0-SNAPSHOT.pom

[INFO] --- maven-install-plugin:2.3.1:install (default-install) @ ctakes-assertion ---
[INFO] [INFO] Deleting <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-temporal-res/target>
                                                                        
[INFO] ------------------------------------------------------------------------
[INFO] Building Apache cTAKES Resources temporal 3.1.0-SNAPSHOT
[INFO] ------------------------------------------------------------------------
[INFO] 
[INFO] --- maven-clean-plugin:2.4.1:clean (default-clean) @ ctakes-temporal-res ---
[INFO] 
[INFO] --- maven-remote-resources-plugin:1.3:process (default) @ ctakes-temporal-res ---
[debug] execute contextualize
[INFO] [INFO] Using 'UTF-8' encoding to copy filtered resources.

[INFO] --- maven-resources-plugin:2.5:resources (default-resources) @ ctakes-temporal-res
---
[INFO] Copying 1 resource
[INFO] Copying 3 resources
[INFO] [INFO] No sources to compile

[INFO] --- maven-compiler-plugin:2.4:compile (default-compile) @ ctakes-temporal-res ---
[debug] execute contextualize
[INFO] [INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] skip non existing resourceDirectory <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-temporal-res/src/test/resources>
[INFO] Copying 3 resources

[INFO] --- maven-resources-plugin:2.5:testResources (default-testResources) @ ctakes-temporal-res
---
[INFO] [INFO] No sources to compile

[INFO] --- maven-compiler-plugin:2.4:testCompile (default-testCompile) @ ctakes-temporal-res
---
[INFO] Tests are skipped.
[INFO] 
[INFO] --- maven-surefire-plugin:2.12:test (default-test) @ ctakes-temporal-res ---
[INFO] [INFO] Building jar: <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-temporal-res/target/ctakes-temporal-res-3.1.0-SNAPSHOT.jar>

[INFO] --- maven-jar-plugin:2.4:jar (default-jar) @ ctakes-temporal-res ---
[INFO] 
[INFO] --- maven-site-plugin:3.1:attach-descriptor (attach-descriptor) @ ctakes-temporal-res
---
[INFO] [INFO] Installing <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-temporal-res/target/ctakes-temporal-res-3.1.0-SNAPSHOT.jar>
to /home/jenkins/jenkins-slave/maven-repositories/1/org/apache/ctakes/ctakes-temporal-res/3.1.0-SNAPSHOT/ctakes-temporal-res-3.1.0-SNAPSHOT.jar
[INFO] Installing <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-temporal-res/pom.xml>
to /home/jenkins/jenkins-slave/maven-repositories/1/org/apache/ctakes/ctakes-temporal-res/3.1.0-SNAPSHOT/ctakes-temporal-res-3.1.0-SNAPSHOT.pom

[INFO] --- maven-install-plugin:2.3.1:install (default-install) @ ctakes-temporal-res ---
[INFO]                                                                         
[INFO] ------------------------------------------------------------------------
[INFO] Building Apache cTAKES Temporal Information Extraction 3.1.0-SNAPSHOT
[INFO] ------------------------------------------------------------------------
[INFO] Deleting <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-temporal/target>
[INFO] 
[INFO] --- maven-clean-plugin:2.4.1:clean (default-clean) @ ctakes-temporal ---
[INFO] [INFO] Configured Artifact: net.sourceforge.ctakesresources:ctakes-resources-umls2011ab:3.1.0:jar
[INFO] Unpacking /home/jenkins/jenkins-slave/maven-repositories/1/net/sourceforge/ctakesresources/ctakes-resources-umls2011ab/3.1.0/ctakes-resources-umls2011ab-3.1.0.jar
to <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-temporal/target/unpacked>
with includes "" and excludes ""

[INFO] --- maven-dependency-plugin:2.6:unpack (unpack) @ ctakes-temporal ---
[INFO] 
[INFO] --- maven-remote-resources-plugin:1.3:process (default) @ ctakes-temporal ---
Downloading: http://repo.maven.apache.org/maven2/jwnl/jwnl/1.3.3/jwnl-1.3.3.pom
[debug] execute contextualize
[INFO] [INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] skip non existing resourceDirectory <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-temporal/src/main/resources>
[INFO] Copying 3 resources

[INFO] --- maven-resources-plugin:2.5:resources (default-resources) @ ctakes-temporal ---
[INFO] 
[INFO] --- maven-compiler-plugin:2.4:compile (default-compile) @ ctakes-temporal ---
[INFO] Compiling 61 source files to <https://builds.apache.org/job/ctakes-trunk-package/ws/ctakes-temporal/target/classes>
ERROR: Maven JVM terminated unexpectedly with exit code 143


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