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From "James Joseph Masanz (JIRA)" <j...@apache.org>
Subject [jira] [Commented] (CTAKES-170) relation extractor has dependency on clinical pipeilne
Date Mon, 25 Feb 2013 19:54:16 GMT

    [ https://issues.apache.org/jira/browse/CTAKES-170?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=13586213#comment-13586213
] 

James Joseph Masanz commented on CTAKES-170:
--------------------------------------------

Troy, 

I think we should show ctakes-relation-extractor in the component descriptor diagram as dependent
on Constituency Parser (as a sibling of Coref-Resolver).

Note for right now at least relation extractor, within RelationExtractorAggregate.xml, does
reference a couple analysis engine descriptors from ctakes-clinical-pipeline, such as

                    <delegateAnalysisEngine key="ExtractionPrepAnnotator">
                        <import location="../../../ctakes-clinical-pipeline/desc/analysis_engine/ExtractionPrepAnnotator.xml"/>
                    </delegateAnalysisEngine>

See http://s.apache.org/trunk-RelationExtractorAggregate.xml 

And the class for that annotator is within package  org.apache.ctakes.clinicalpipeline.ae

Also, it's a little messy as far as the diagram because it looks like relation-extractor is
using StatusAnnotator and NegationAnnotator instead of AssertionAnnotator. 

I just created JIRA issue  CTAKES-172 "relation-extractor is using StatusAnnotator and NegationAnnotator
instead of AssertionAnnotator"

Regards, 
James Masanz


                
> relation extractor has dependency on clinical pipeilne
> ------------------------------------------------------
>
>                 Key: CTAKES-170
>                 URL: https://issues.apache.org/jira/browse/CTAKES-170
>             Project: cTAKES
>          Issue Type: Bug
>            Reporter: Tim Miller
>            Assignee: Dmitriy Dligach
>            Priority: Minor
>
> dependency should go in the other direction if it is necessary at all.

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