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From RANGA CHANDRA GUDIVADA <chandhragupta...@hotmail.com>
Subject Error while running DrugMentionAnnotator.xml
Date Sat, 08 Aug 2015 16:12:21 GMT
Hello All,

I am getting the below error while trying to run the analysis engine "DrugMentionAnnotator.xml"
from user install CVD.  Please let me know if anyone has similar issues and were able to successfully
fix it. 

Ctakes Version used : apache-ctakes-3.2.2
Ctakes Resources : ctakes-resources-

Caused by: org.apache.uima.cas.CASRuntimeException: JCas type "org.apache.ctakes.drugner.type.FrequencyAnnotation"
used in Java code,  but was not declared in the XML type descriptor.
    at org.apache.uima.jcas.impl.JCasImpl.getType(JCasImpl.java:412)
    at org.apache.uima.jcas.impl.JCasImpl.getCasType(JCasImpl.java:436)
    at org.apache.uima.jcas.impl.JFSIndexRepositoryImpl.getAnnotationIndex(JFSIndexRepositoryImpl.java:80)
    at org.apache.ctakes.drugner.ae.DrugMentionAnnotator.removeAnnotations(DrugMentionAnnotator.java:306)
    at org.apache.ctakes.drugner.ae.DrugMentionAnnotator.removeDrugNerTypes(DrugMentionAnnotator.java:299)
    at org.apache.ctakes.drugner.ae.DrugMentionAnnotator.process(DrugMentionAnnotator.java:260)
    ... 45 more


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