ctakes-dev mailing list archives

Site index · List index
Message view « Date » · « Thread »
Top « Date » · « Thread »
From Justin Zhang <justinzhang...@gmail.com>
Subject how to run i2b2 data
Date Wed, 05 Aug 2015 22:38:36 GMT
Hello everyone,

I am running ctakes with i2b2 data

In each xml file, there are multiple patient records. I am able to separate
each patient into single files and process them with "runCPE.sh"

Is there a way to convert this single xml file into the format "ctakes"
accepted, and process as a single input file, and generate a single output
file (results labelled by patient id). For example, each patient id has a
"smoking status".



  • Unnamed multipart/alternative (inline, None, 0 bytes)
View raw message