Return-Path: X-Original-To: apmail-ctakes-dev-archive@www.apache.org Delivered-To: apmail-ctakes-dev-archive@www.apache.org Received: from mail.apache.org (hermes.apache.org [140.211.11.3]) by minotaur.apache.org (Postfix) with SMTP id C2F8617BDD for ; Mon, 11 May 2015 21:29:53 +0000 (UTC) Received: (qmail 79672 invoked by uid 500); 11 May 2015 21:29:53 -0000 Delivered-To: apmail-ctakes-dev-archive@ctakes.apache.org Received: (qmail 79595 invoked by uid 500); 11 May 2015 21:29:53 -0000 Mailing-List: contact dev-help@ctakes.apache.org; run by ezmlm Precedence: bulk List-Help: List-Unsubscribe: List-Post: List-Id: Reply-To: dev@ctakes.apache.org Delivered-To: mailing list dev@ctakes.apache.org Delivered-To: moderator for dev@ctakes.apache.org Received: (qmail 67656 invoked by uid 99); 11 May 2015 21:24:20 -0000 X-Virus-Scanned: Debian amavisd-new at spamd4-us-west.apache.org X-Spam-Flag: NO X-Spam-Score: 3.15 X-Spam-Level: *** X-Spam-Status: No, score=3.15 tagged_above=-999 required=6.31 tests=[DKIM_SIGNED=0.1, DKIM_VALID=-0.1, DKIM_VALID_AU=-0.1, FREEMAIL_ENVFROM_END_DIGIT=0.25, HTML_MESSAGE=3, SPF_PASS=-0.001, URIBL_BLOCKED=0.001] autolearn=disabled Authentication-Results: spamd4-us-west.apache.org (amavisd-new); dkim=pass (2048-bit key) header.d=gmail.com DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=gmail.com; s=20120113; h=mime-version:from:date:message-id:subject:to:content-type; bh=iWkq0xaJ267VJ2PZPAHXKuoL4Q1wFq+PdrpYLB+pOpI=; b=DJX1C4p2z+Amml2lIOAIjQznyUHY6fcoUO0n4mJIA5DiwXryEQqL0eu+NyGQ3BEX9u VkCfvHNQL8tI9nHkZvxjnzCbAe12lUKt/nGvh1eeLoNtaucrvuSyfqnnoGxABWwKAcMm 11hi4sW3LwtY2Lzwpzj8sqB8iGhfAcLj6qGpq47vxRVnc/SJYgSN6Cxz51kn6KhigCfS 8zJ4mgtibDb7ZusLDoNZLNSjyzi47K5LStOMwv1tTxWDPXenW9Cj9NRIk+C2irz6gvdk z9MsgAWgUKd61Ff8gZJ/5G5EYAOv6N0nuxqTsq45XBm5LQnuUudkDw7rE2lwSvOFe4cF cl/Q== X-Received: by 10.182.209.99 with SMTP id ml3mr9566437obc.20.1431379453406; Mon, 11 May 2015 14:24:13 -0700 (PDT) MIME-Version: 1.0 From: Pedro Teixeira Date: Mon, 11 May 2015 16:23:33 -0500 Message-ID: Subject: UMLS Authentication failing despite correct username and password To: dev@ctakes.apache.org Content-Type: multipart/alternative; boundary=e89a8ff1cf60dbf4be0515d4ff77 --e89a8ff1cf60dbf4be0515d4ff77 Content-Type: text/plain; charset=UTF-8 So I've checked the Dictionary lookup XML file and that password works to log in via the website. This was also working last week but stopped at some point over the last week. I've got cTAKES running on a linux system so I can index batches of documents via a script. The exact error is as follows (with the username/password blocked out). 11 May 2015 15:59:26 INFO LvgCmdApiResourceImpl - cwd = /home/PT/cTAKES/apache-ctakes-3.2.1 11 May 2015 15:59:26 INFO LvgCmdApiResourceImpl - cd /home/PT/cTAKES/apache-ctakes-3.2.1/resources/org/apache/ctakes/lvg/ 11 May 2015 15:59:27 INFO LvgCmdApiResourceImpl - cd /home/PT/cTAKES/apache-ctakes-3.2.1 11 May 2015 15:59:27 INFO ClearNLPDependencyParserAE - using Morphy analysis? true Loading configuration. Loading feature templates. Loading lexica. Loading model: ........................................................................................ 11 May 2015 15:59:42 INFO Chunker - Chunker model file: org/apache/ctakes/chunker/models/chunker-model.zip 11 May 2015 15:59:44 INFO ContextDependentTokenizerAnnotator - Finite state machines loaded. 11 May 2015 15:59:44 INFO ConstituencyParser - Initializing parser... 11 May 2015 15:59:46 INFO ContextAnnotator - SCOPE ORDER: [1, 3] 11 May 2015 15:59:46 INFO NegationContextAnalyzer - initBoundaryData() called for ContextInitializer 11 May 2015 15:59:47 INFO POSTagger - POS tagger model file: org/apache/ctakes/postagger/models/mayo-pos.zip 11 May 2015 15:59:47 INFO AbstractJCasTermAnnotator - Default - Loading dictionary into memory. Initial run may take few mins to load. Please be patient... 11 May 2015 15:59:47 INFO AbstractJCasTermAnnotator - Using dictionary lookup window type: org.apache.ctakes.typesystem.type.textspan.Sentence 11 May 2015 15:59:47 INFO AbstractJCasTermAnnotator - Exclusion tagset loaded: CC CD DT EX IN LS MD PDT POS PP PP$ PRP PRP$ RP TO VB VBD VBG VBN VBP VBZ WDT WP WPS WRB 11 May 2015 15:59:47 INFO AbstractJCasTermAnnotator - Using minimum term text span: 3 11 May 2015 15:59:47 INFO DictionaryDescriptorParser - Parsing dictionary specifications: /home/PT/cTAKES/apache-ctakes-3.2.1/resources/org/apache/ctakes/dictionary/lookup/fast/cTakesHsql.xml 11 May 2015 15:59:48 ERROR UmlsUserApprover - UMLS Account at https://uts-ws.nlm.nih.gov/restful/isValidUMLSUser is not valid for user ######### with ###################### Couldn't initialize processing engine. Initialization of CAS Processor with name "AggregatePlaintextFastUMLSProcessor" failed. I also have a test implementation on a local windows 8 laptop that also fails now due to the same error so it seems like it's UMLS related issue but I haven't heard back from them yet and was hoping perhaps someone with cTAKES has previously experienced and resolved the issue. Thanks! --e89a8ff1cf60dbf4be0515d4ff77--