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From Pedro Teixeira <teixeir...@gmail.com>
Subject UMLS Authentication failing despite correct username and password
Date Mon, 11 May 2015 21:23:33 GMT
So I've checked the Dictionary lookup XML file and that password works to
log in via the website. This was also working last week but stopped at some
point over the last week. I've got cTAKES running on a linux system so I
can index batches of documents via a script. The exact error is as follows
(with the username/password blocked out).

11 May 2015 15:59:26  INFO LvgCmdApiResourceImpl - cwd =
/home/PT/cTAKES/apache-ctakes-3.2.1
11 May 2015 15:59:26  INFO LvgCmdApiResourceImpl - cd
/home/PT/cTAKES/apache-ctakes-3.2.1/resources/org/apache/ctakes/lvg/
11 May 2015 15:59:27  INFO LvgCmdApiResourceImpl - cd
/home/PT/cTAKES/apache-ctakes-3.2.1
11 May 2015 15:59:27  INFO ClearNLPDependencyParserAE - using Morphy
analysis? true
Loading configuration.
Loading feature templates.
Loading lexica.
Loading model:
........................................................................................
11 May 2015 15:59:42  INFO Chunker - Chunker model file:
org/apache/ctakes/chunker/models/chunker-model.zip
11 May 2015 15:59:44  INFO ContextDependentTokenizerAnnotator - Finite
state machines loaded.
11 May 2015 15:59:44  INFO ConstituencyParser - Initializing parser...
11 May 2015 15:59:46  INFO ContextAnnotator - SCOPE ORDER: [1, 3]
11 May 2015 15:59:46  INFO NegationContextAnalyzer - initBoundaryData()
called for ContextInitializer
11 May 2015 15:59:47  INFO POSTagger - POS tagger model file:
org/apache/ctakes/postagger/models/mayo-pos.zip
11 May 2015 15:59:47  INFO AbstractJCasTermAnnotator - Default - Loading
dictionary into memory.  Initial run may take few mins to load. Please be
patient...
11 May 2015 15:59:47  INFO AbstractJCasTermAnnotator - Using dictionary
lookup window type: org.apache.ctakes.typesystem.type.textspan.Sentence
11 May 2015 15:59:47  INFO AbstractJCasTermAnnotator - Exclusion tagset
loaded: CC CD DT EX IN LS MD PDT POS PP PP$ PRP PRP$ RP TO VB VBD VBG VBN
VBP VBZ WDT WP WPS WRB
11 May 2015 15:59:47  INFO AbstractJCasTermAnnotator - Using minimum term
text span: 3
11 May 2015 15:59:47  INFO DictionaryDescriptorParser - Parsing dictionary
specifications:
/home/PT/cTAKES/apache-ctakes-3.2.1/resources/org/apache/ctakes/dictionary/lookup/fast/cTakesHsql.xml
11 May 2015 15:59:48 ERROR UmlsUserApprover - UMLS Account at
https://uts-ws.nlm.nih.gov/restful/isValidUMLSUser is not valid for user
######### with ######################
Couldn't initialize processing engine.
  Initialization of CAS Processor with name
"AggregatePlaintextFastUMLSProcessor" failed.


I also have a test implementation on a local windows 8 laptop that also
fails now due to the same error so it seems like it's UMLS related issue
but I haven't heard back from them yet and was hoping perhaps someone with
cTAKES has previously experienced and resolved the issue.

Thanks!

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