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From "Miller, Timothy" <Timothy.Mil...@childrens.harvard.edu>
Subject Re: Prep for upcoming cTAKES 3.2.2 Patch Release
Date Thu, 30 Apr 2015 13:13:37 GMT
A question about the default pipelines. There has been some concern
about the new assertion modules (the machine learning ones that I worked
on), partially due to some less intuitive error modes than negex and
partially due to its reliance on the dependency parser which increases
the memory footprint substantially. Should we consider reverting to the
rule-based negation for the default pipeline (thus also removing the
dependency parser from the default pipeline)? I'm not sure what that
would mean for the other assertion modules (uncertainty, generic,
subject, hypothetical) -- but I think it means they would not exist.

I can see arguments both ways. I also think if we revert we would want
to have some way for people to access all the machine learning assertion
modules if they want them.

Tim


On 04/29/2015 06:04 PM, Chen, Pei wrote:
> FYI- I will plan to create a 3.2.2 branch from trunk this week in prep for the 3.2.2
release so others can continue their work in trunk.
> Feel free to put any changes in trunk now if you want to have it included in the 3.2.2
patch release.
> The main changes are:
>
> 1)      Improved temporal models
>
> 2)      Minor bug fixes reported in Jira
>
> From: Chen, Pei [mailto:Pei.Chen@childrens.harvard.edu]
> Sent: Thursday, March 12, 2015 12:55 PM
> To: dev@ctakes.apache.org
> Subject: Prep for upcoming cTAKES 3.2.2 Patch Release
>
> I was thinking of creating a 3.2.2 release for Mar (it's long passed the original Jan
date?)  I can volunteer to be the RM again.
> There are still plenty of unresolved items... If you plan to have anything you would
like included in the upcoming release, please mark it in Jira and plan the commits accordingly...
>
> Jira Items:
> https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_issues_-3Fjql-3DfixVersion-2520-253D-25203.2.2-2520AND-2520project-2520-253D-2520CTAKES&d=BQIFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=Heup-IbsIg9Q1TPOylpP9FE4GTK-OqdTDRRNQXipowRLRjx0ibQrHEo8uYx6674h&m=2WI-fDHF0jDSXyUcTxv5U4_T_w9MBjbDAw3ZRYgoLXs&s=CF0gyLPeOyRvUjRyVm_rcl8SaFUtPTMmfrLObpiHtxM&e=

> 1-25 of 25
> Columns
> T
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> Patch Info
>
> Key
>
> Summary
>
> Assignee
>
> Reporter
>
> P
>
> Status
>
> Resolution
>
> Created
>
> Updated
>
> Due
>
> [Bug]<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D349&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=OuUBnh20dG00BWWGMKNkCLddKAzEKEiFP3s5uMqcXvU&e=>
>
> CTAKES-349<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D349&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=OuUBnh20dG00BWWGMKNkCLddKAzEKEiFP3s5uMqcXvU&e=>
>
>
> JdbcWriterTemplate does not store rows if there are fewer than 100 per note<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D349&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=OuUBnh20dG00BWWGMKNkCLddKAzEKEiFP3s5uMqcXvU&e=>
>
> Unassigned
>
> Sean Finan<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_secure_ViewProfile.jspa-3Fname-3Dseanfinan&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=0eQpWYxtyJWqM1JvCN8qkioGRcjID0-QD5k2tf9-1Rc&e=>
>
> [Major]
>
> OPEN
>
> Unresolved
>
> 12/Mar/15
>
> 12/Mar/15
>
>
>
> [Bug]<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D347&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=ja8aLYd7A_7XF8HGNZlgwYtf57IaTkNbKjuO-LfG1Nw&e=>
>
> CTAKES-347<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D347&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=ja8aLYd7A_7XF8HGNZlgwYtf57IaTkNbKjuO-LfG1Nw&e=>
>
>
> AggregateCdaProcessor fails with URI is not hierarchical<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D347&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=ja8aLYd7A_7XF8HGNZlgwYtf57IaTkNbKjuO-LfG1Nw&e=>
>
> Unassigned
>
> Pei Chen<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_secure_ViewProfile.jspa-3Fname-3Dchenpei&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=oTni0dRNMncNZa8XclTZHjQ6obKXu9M6duLiy4E_O2s&e=>
>
> [Major]
>
> OPEN
>
> Unresolved
>
> 02/Feb/15
>
> 02/Feb/15
>
>
>
> [Improvement]<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D344&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=WcwQCMRJDST_hU4wIa1Q6zF_pa9NqzfX61g6WPlB4YY&e=>
>
> CTAKES-344<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D344&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=WcwQCMRJDST_hU4wIa1Q6zF_pa9NqzfX61g6WPlB4YY&e=>
>
>
> Add DrugNER to clinical-pipeline<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D344&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=WcwQCMRJDST_hU4wIa1Q6zF_pa9NqzfX61g6WPlB4YY&e=>
>
> Pei Chen<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_secure_ViewProfile.jspa-3Fname-3Dchenpei&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=oTni0dRNMncNZa8XclTZHjQ6obKXu9M6duLiy4E_O2s&e=>
>
> Pei Chen<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_secure_ViewProfile.jspa-3Fname-3Dchenpei&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=oTni0dRNMncNZa8XclTZHjQ6obKXu9M6duLiy4E_O2s&e=>
>
> [Major]
>
> RESOLVED
>
> Fixed
>
> 18/Dec/14
>
> 18/Dec/14
>
>
>
> [Bug]<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D341&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=9mA9vC6pkRQwGlNIFHjgX3Am3T64fX93VbrV1oJndtQ&e=>
>
> CTAKES-341<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D341&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=9mA9vC6pkRQwGlNIFHjgX3Am3T64fX93VbrV1oJndtQ&e=>
>
>
> FractionFSM annotates incorrect span<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D341&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=9mA9vC6pkRQwGlNIFHjgX3Am3T64fX93VbrV1oJndtQ&e=>
>
> britt fitch<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_secure_ViewProfile.jspa-3Fname-3Dbritt.fitch&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=F5K2zd4RryTOmGZIQho5LuzjuEeWpF-VTqTB1oUklpI&e=>
>
> britt fitch<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_secure_ViewProfile.jspa-3Fname-3Dbritt.fitch&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=F5K2zd4RryTOmGZIQho5LuzjuEeWpF-VTqTB1oUklpI&e=>
>
> [Major]
>
> OPEN
>
> Unresolved
>
> 12/Dec/14
>
> 12/Dec/14
>
>
>
> [Bug]<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D340&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=O7WwUyS6uv3f-u3UPoVnX5oUgLmZhkATH8A75v87mjU&e=>
>
> CTAKES-340<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D340&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=O7WwUyS6uv3f-u3UPoVnX5oUgLmZhkATH8A75v87mjU&e=>
>
>
> AggregatePlaintextProcessor.xml has invalid xml<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D340&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=O7WwUyS6uv3f-u3UPoVnX5oUgLmZhkATH8A75v87mjU&e=>
>
> Unassigned
>
> Pei Chen<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_secure_ViewProfile.jspa-3Fname-3Dchenpei&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=oTni0dRNMncNZa8XclTZHjQ6obKXu9M6duLiy4E_O2s&e=>
>
> [Minor]
>
> RESOLVED
>
> Fixed
>
> 05/Dec/14
>
> 05/Dec/14
>
>
>
> [Improvement]<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D338&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=0NDZ0IWL_AkO7RYaJ3h4LSIuK7bwmmAeH-514IRvHXk&e=>
>
> CTAKES-338<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D338&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=0NDZ0IWL_AkO7RYaJ3h4LSIuK7bwmmAeH-514IRvHXk&e=>
>
>
> Download/Unpack full LVG by default<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D338&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=0NDZ0IWL_AkO7RYaJ3h4LSIuK7bwmmAeH-514IRvHXk&e=>
>
> Unassigned
>
> Pei Chen<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_secure_ViewProfile.jspa-3Fname-3Dchenpei&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=oTni0dRNMncNZa8XclTZHjQ6obKXu9M6duLiy4E_O2s&e=>
>
> [Minor]
>
> OPEN
>
> Unresolved
>
> 01/Dec/14
>
> 01/Dec/14
>
>
>
> [Bug]<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D333&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=dFehZmw2RDxGnHTD0RCSSgo7dvNn2QjLmNKJfUtrza0&e=>
>
> CTAKES-333<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D333&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=dFehZmw2RDxGnHTD0RCSSgo7dvNn2QjLmNKJfUtrza0&e=>
>
>
> jwnl-1.3.3.jar; error in opening zip file<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D333&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=dFehZmw2RDxGnHTD0RCSSgo7dvNn2QjLmNKJfUtrza0&e=>
>
> Pei Chen<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_secure_ViewProfile.jspa-3Fname-3Dchenpei&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=oTni0dRNMncNZa8XclTZHjQ6obKXu9M6duLiy4E_O2s&e=>
>
> Pei Chen<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_secure_ViewProfile.jspa-3Fname-3Dchenpei&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=oTni0dRNMncNZa8XclTZHjQ6obKXu9M6duLiy4E_O2s&e=>
>
> [Major]
>
> RESOLVED
>
> Fixed
>
> 18/Nov/14
>
> 18/Nov/14
>
>
>
> [Bug]<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D332&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=P9UzcxDeds8doVSOhmYwjpC4ZhfFFdyzI8DTmGYH2D8&e=>
>
> CTAKES-332<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D332&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=P9UzcxDeds8doVSOhmYwjpC4ZhfFFdyzI8DTmGYH2D8&e=>
>
>
> Upgrade to OpenNLP 1.5.2 -> 1.5.3<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D332&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=P9UzcxDeds8doVSOhmYwjpC4ZhfFFdyzI8DTmGYH2D8&e=>
>
> Pei Chen<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_secure_ViewProfile.jspa-3Fname-3Dchenpei&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=oTni0dRNMncNZa8XclTZHjQ6obKXu9M6duLiy4E_O2s&e=>
>
> Pei Chen<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_secure_ViewProfile.jspa-3Fname-3Dchenpei&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=oTni0dRNMncNZa8XclTZHjQ6obKXu9M6duLiy4E_O2s&e=>
>
> [Minor]
>
> RESOLVED
>
> Fixed
>
> 18/Nov/14
>
> 18/Nov/14
>
>
>
> [Improvement]<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D328&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=Ph_oOi_d6Uq0-7ktFjRj6sDiCLXUswAeabl0I6WgJyA&e=>
>
> CTAKES-328<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D328&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=Ph_oOi_d6Uq0-7ktFjRj6sDiCLXUswAeabl0I6WgJyA&e=>
>
>
> Clean up XML Annotator Descriptors<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D328&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=Ph_oOi_d6Uq0-7ktFjRj6sDiCLXUswAeabl0I6WgJyA&e=>
>
> Unassigned
>
> Pei Chen<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_secure_ViewProfile.jspa-3Fname-3Dchenpei&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=oTni0dRNMncNZa8XclTZHjQ6obKXu9M6duLiy4E_O2s&e=>
>
> [Major]
>
> OPEN
>
> Unresolved
>
> 04/Nov/14
>
> 04/Nov/14
>
>
>
> [Bug]<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D320&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=HL30Mvt59Ofv_W4MuyJcEqTwHbSFfj8QLSS6A_xGibM&e=>
>
> CTAKES-320<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D320&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=HL30Mvt59Ofv_W4MuyJcEqTwHbSFfj8QLSS6A_xGibM&e=>
>
>
> Methods used by getDefaultPipeline should be able to load reasonable defaults without
expecting external files.<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D320&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=HL30Mvt59Ofv_W4MuyJcEqTwHbSFfj8QLSS6A_xGibM&e=>
>
> Unassigned
>
> jay vyas<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_secure_ViewProfile.jspa-3Fname-3Djayunit100&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=xd9lKfUvrE7UKxKaRFIuxlaF81Vt0fB_K-RoKdiQhgA&e=>
>
> [Major]
>
> OPEN
>
> Unresolved
>
> 11/Oct/14
>
> 23/Nov/14
>
>
>
> [Bug]<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D302&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=hpXIikT1KsHHNxQ6pCgLUhRf5jB9G5pI6q6Mrcyn5rc&e=>
>
> CTAKES-302<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D302&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=hpXIikT1KsHHNxQ6pCgLUhRf5jB9G5pI6q6Mrcyn5rc&e=>
>
>
> Element type "hibernate-mapping" must be followed by either attribute specifications,
">" or "/>".<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D302&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=hpXIikT1KsHHNxQ6pCgLUhRf5jB9G5pI6q6Mrcyn5rc&e=>
>
> Unassigned
>
> James Joseph Masanz<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_secure_ViewProfile.jspa-3Fname-3Djames-2Dmasanz&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=ZQ5XbznHDPTlyQj2x6xlobJ1wVtYme4ySlH6Lyk0ygI&e=>
>
> [Major]
>
> OPEN
>
> Unresolved
>
> 27/Jun/14
>
> 07/Nov/14
>
>
>
> [Improvement]<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D295&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=NwinwTu3E-d8Sr3patmWv33XdZ3quio1ZNpFJol5J3I&e=>
>
> CTAKES-295<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D295&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=NwinwTu3E-d8Sr3patmWv33XdZ3quio1ZNpFJol5J3I&e=>
>
>
> Use UIMAFit-style configuration annotations<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D295&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=NwinwTu3E-d8Sr3patmWv33XdZ3quio1ZNpFJol5J3I&e=>
>
> Unassigned
>
> Tim Miller<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_secure_ViewProfile.jspa-3Fname-3Dtmill&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=4W4EBFr8XLaVyxcl4jkgLIxVSGoDT1XUfiACmLLrFnM&e=>
>
> [Minor]
>
> OPEN
>
> Unresolved
>
> 15/Apr/14
>
> 07/Nov/14
>
>
>
> [Bug]<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D275&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=VtlyFgJ5ZTsqiMylG_SMSqduTp-tkMgz48QSbQG_fO8&e=>
>
> CTAKES-275<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D275&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=VtlyFgJ5ZTsqiMylG_SMSqduTp-tkMgz48QSbQG_fO8&e=>
>
>
> some of the older junit tests don't have the right Project name in the run configurations<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D275&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=VtlyFgJ5ZTsqiMylG_SMSqduTp-tkMgz48QSbQG_fO8&e=>
>
> Unassigned
>
> James Joseph Masanz<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_secure_ViewProfile.jspa-3Fname-3Djames-2Dmasanz&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=ZQ5XbznHDPTlyQj2x6xlobJ1wVtYme4ySlH6Lyk0ygI&e=>
>
> [Minor]
>
> OPEN
>
> Unresolved
>
> 29/Nov/13
>
> 07/Nov/14
>
>
>
> [Task]<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D232&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=9Otav5ryLTVGwBM22s9MwLbhCWpLthrvKqUwc6HFyBY&e=>
>
> CTAKES-232<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D232&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=9Otav5ryLTVGwBM22s9MwLbhCWpLthrvKqUwc6HFyBY&e=>
>
>
> change concept type<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D232&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=9Otav5ryLTVGwBM22s9MwLbhCWpLthrvKqUwc6HFyBY&e=>
>
> Unassigned
>
> Tim Miller<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_secure_ViewProfile.jspa-3Fname-3Dtmill&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=4W4EBFr8XLaVyxcl4jkgLIxVSGoDT1XUfiACmLLrFnM&e=>
>
> [Minor]
>
> OPEN
>
> Unresolved
>
> 02/Sep/13
>
> 07/Nov/14
>
>
>
> [Bug]<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D213&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=mBYyaG8R_4qOEocnqjaERYpN1szk3_TeWE172aag9AI&e=>
>
> CTAKES-213<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D213&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=mBYyaG8R_4qOEocnqjaERYpN1szk3_TeWE172aag9AI&e=>
>
>
> ModifierExtractorAnnotator should produce XxxxModifier subtypes<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D213&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=mBYyaG8R_4qOEocnqjaERYpN1szk3_TeWE172aag9AI&e=>
>
> Unassigned
>
> Steven Bethard<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_secure_ViewProfile.jspa-3Fname-3Dsteven.bethard&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=XbKCCzU7sMe_0LsndLL705t0mV63VZ60K3-BbHgA0Ks&e=>
>
> [Major]
>
> OPEN
>
> Unresolved
>
> 27/Jun/13
>
> 07/Nov/14
>
>
>
> [Bug]<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D178&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=jrlr31kYU5AU8ArcpIus538MxWbPRdUyqhnwHYr-YAY&e=>
>
> CTAKES-178<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D178&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=jrlr31kYU5AU8ArcpIus538MxWbPRdUyqhnwHYr-YAY&e=>
>
>
> parsing of medication strength does not verify a number was discovered (strength value
includes both the dosage and strength value in some cases)<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D178&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=jrlr31kYU5AU8ArcpIus538MxWbPRdUyqhnwHYr-YAY&e=>
>
> James Joseph Masanz<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_secure_ViewProfile.jspa-3Fname-3Djames-2Dmasanz&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=ZQ5XbznHDPTlyQj2x6xlobJ1wVtYme4ySlH6Lyk0ygI&e=>
>
> James Joseph Masanz<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_secure_ViewProfile.jspa-3Fname-3Djames-2Dmasanz&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=ZQ5XbznHDPTlyQj2x6xlobJ1wVtYme4ySlH6Lyk0ygI&e=>
>
> [Major]
>
> OPEN
>
> Unresolved
>
> 19/Mar/13
>
> 07/Nov/14
>
>
>
> [Improvement]<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D172&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=uN61qXVIcijDFxdcbuhbrRbrqLTA-0Rjb1yh_8zLAcY&e=>
>
> CTAKES-172<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D172&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=uN61qXVIcijDFxdcbuhbrRbrqLTA-0Rjb1yh_8zLAcY&e=>
>
>
> relation-extractor is using StatusAnnotator and NegationAnnotator instead of AssertionAnnotator<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D172&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=uN61qXVIcijDFxdcbuhbrRbrqLTA-0Rjb1yh_8zLAcY&e=>
>
> Unassigned
>
> James Joseph Masanz<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_secure_ViewProfile.jspa-3Fname-3Djames-2Dmasanz&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=ZQ5XbznHDPTlyQj2x6xlobJ1wVtYme4ySlH6Lyk0ygI&e=>
>
> [Major]
>
> OPEN
>
> Unresolved
>
> 25/Feb/13
>
> 07/Nov/14
>
>
>
> [Bug]<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D155&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=T2L74MYb6bhw14GtPBES9nDxomx9NMQ7QzC2Gi-tBxU&e=>
>
> CTAKES-155<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D155&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=T2L74MYb6bhw14GtPBES9nDxomx9NMQ7QzC2Gi-tBxU&e=>
>
>
> SimpleSegmentWithTagsAnnotator assumes all section names are 5 characters<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D155&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=T2L74MYb6bhw14GtPBES9nDxomx9NMQ7QzC2Gi-tBxU&e=>
>
> Unassigned
>
> Steven Bethard<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_secure_ViewProfile.jspa-3Fname-3Dsteven.bethard&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=XbKCCzU7sMe_0LsndLL705t0mV63VZ60K3-BbHgA0Ks&e=>
>
> [Major]
>
> OPEN
>
> Unresolved
>
> 08/Feb/13
>
> 07/Nov/14
>
>
>
> [Task]<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D138&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=8Spv4Kqo9PgjvNgGtbij0fjTKoAzIHqF8jaKcIB2Fg0&e=>
>
> CTAKES-138<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D138&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=8Spv4Kqo9PgjvNgGtbij0fjTKoAzIHqF8jaKcIB2Fg0&e=>
>
>
> Remove 3rd party jars from our SVN<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D138&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=8Spv4Kqo9PgjvNgGtbij0fjTKoAzIHqF8jaKcIB2Fg0&e=>
>
> James Joseph Masanz<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_secure_ViewProfile.jspa-3Fname-3Djames-2Dmasanz&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=ZQ5XbznHDPTlyQj2x6xlobJ1wVtYme4ySlH6Lyk0ygI&e=>
>
> James Joseph Masanz<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_secure_ViewProfile.jspa-3Fname-3Djames-2Dmasanz&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=ZQ5XbznHDPTlyQj2x6xlobJ1wVtYme4ySlH6Lyk0ygI&e=>
>
> [Critical]
>
> OPEN
>
> Unresolved
>
> 31/Jan/13
>
> 07/Nov/14
>
>
>
> [Sub-task]<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D124&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=6AjBWij1dn8qnTd_200NvVYOpC2B9_qdNn-uM8-Lrmc&e=>
>
> CTAKES-124<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D124&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=6AjBWij1dn8qnTd_200NvVYOpC2B9_qdNn-uM8-Lrmc&e=>
>
>
> CTAKES-199<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D199&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=VE7v4jYnutBhKT4_Z5x8nWpOkJzubtJ4nvOrSuztX8c&e=>
remove internal UIMA types from coreference<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D124&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=6AjBWij1dn8qnTd_200NvVYOpC2B9_qdNn-uM8-Lrmc&e=>
>
> Tim Miller<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_secure_ViewProfile.jspa-3Fname-3Dtmill&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=4W4EBFr8XLaVyxcl4jkgLIxVSGoDT1XUfiACmLLrFnM&e=>
>
> Tim Miller<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_secure_ViewProfile.jspa-3Fname-3Dtmill&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=4W4EBFr8XLaVyxcl4jkgLIxVSGoDT1XUfiACmLLrFnM&e=>
>
> [Minor]
>
> OPEN
>
> Unresolved
>
> 07/Jan/13
>
> 07/Nov/14
>
>
>
> [Improvement]<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D122&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=mU7sYTgj4ZSp3Jr1YSs82DfDUMPAdX-owsClqHfsVCg&e=>
>
> CTAKES-122<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D122&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=mU7sYTgj4ZSp3Jr1YSs82DfDUMPAdX-owsClqHfsVCg&e=>
>
>
> include LVG with a future version of cTAKES?<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D122&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=mU7sYTgj4ZSp3Jr1YSs82DfDUMPAdX-owsClqHfsVCg&e=>
>
> James Joseph Masanz<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_secure_ViewProfile.jspa-3Fname-3Djames-2Dmasanz&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=ZQ5XbznHDPTlyQj2x6xlobJ1wVtYme4ySlH6Lyk0ygI&e=>
>
> James Joseph Masanz<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_secure_ViewProfile.jspa-3Fname-3Djames-2Dmasanz&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=ZQ5XbznHDPTlyQj2x6xlobJ1wVtYme4ySlH6Lyk0ygI&e=>
>
> [Major]
>
> OPEN
>
> Unresolved
>
> 19/Dec/12
>
> 01/Dec/14
>
> 29/Jan/13
>
> [Improvement]<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D78&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=2dg4uqUZLgUbt7Xt_VkzRJWgUy4bWFGnN1HfxVAiRB0&e=>
>
> CTAKES-78<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D78&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=2dg4uqUZLgUbt7Xt_VkzRJWgUy4bWFGnN1HfxVAiRB0&e=>
>
>
> Update Chunker unit tests<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D78&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=2dg4uqUZLgUbt7Xt_VkzRJWgUy4bWFGnN1HfxVAiRB0&e=>
>
> Unassigned
>
> Pei Chen<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_secure_ViewProfile.jspa-3Fname-3Dchenpei&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=oTni0dRNMncNZa8XclTZHjQ6obKXu9M6duLiy4E_O2s&e=>
>
> [Minor]
>
> OPEN
>
> Unresolved
>
> 12/Oct/12
>
> 07/Nov/14
>
>
>
> [Improvement]<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D77&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=zr7FVzCXM5tJeQ3vWz8WBU823NHpgF0aFleHTBHtz90&e=>
>
> CTAKES-77<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D77&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=zr7FVzCXM5tJeQ3vWz8WBU823NHpgF0aFleHTBHtz90&e=>
>
>
> Update POSTagger Unit Tests<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D77&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=zr7FVzCXM5tJeQ3vWz8WBU823NHpgF0aFleHTBHtz90&e=>
>
> Unassigned
>
> Pei Chen<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_secure_ViewProfile.jspa-3Fname-3Dchenpei&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=oTni0dRNMncNZa8XclTZHjQ6obKXu9M6duLiy4E_O2s&e=>
>
> [Minor]
>
> OPEN
>
> Unresolved
>
> 12/Oct/12
>
> 07/Nov/14
>
>
>
> [Bug]<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D76&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=B6Elzjw3_9YV-ArH2WU2eWty5ojnIZNWiwQoPk8TCCE&e=>
>
> CTAKES-76<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D76&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=B6Elzjw3_9YV-ArH2WU2eWty5ojnIZNWiwQoPk8TCCE&e=>
>
>
> get third party dependencies into Maven Central<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D76&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=B6Elzjw3_9YV-ArH2WU2eWty5ojnIZNWiwQoPk8TCCE&e=>
>
> Unassigned
>
> Steven Bethard<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_secure_ViewProfile.jspa-3Fname-3Dsteven.bethard&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=XbKCCzU7sMe_0LsndLL705t0mV63VZ60K3-BbHgA0Ks&e=>
>
> [Blocker]
>
> REOPENED
>
> Unresolved
>
> 10/Oct/12
>
> 07/Nov/14
>
>
>
> [Task]<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D74&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=FwrUoMosTUVfrA6pIRkJo0Zganun18KBXtCImqcS2Vo&e=>
>
> CTAKES-74<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D74&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=FwrUoMosTUVfrA6pIRkJo0Zganun18KBXtCImqcS2Vo&e=>
>
>
> Tokenizer PennTreeBank breaks with certain apostrophes in tokens.<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D74&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=FwrUoMosTUVfrA6pIRkJo0Zganun18KBXtCImqcS2Vo&e=>
>
> Unassigned
>
> Pei Chen<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_secure_ViewProfile.jspa-3Fname-3Dchenpei&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=oTni0dRNMncNZa8XclTZHjQ6obKXu9M6duLiy4E_O2s&e=>
>
> [Critical]
>
> OPEN
>
> Unresolved
>
> 08/Oct/12
>
> 07/Nov/14
>
>
>


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