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From "Chen, Pei" <Pei.C...@childrens.harvard.edu>
Subject RE: Prep for upcoming cTAKES 3.2.2 Patch Release
Date Wed, 29 Apr 2015 21:54:57 GMT
FYI- I will plan to create a 3.2.2 branch from trunk this week in prep for the 3.2.2 release
so others can continue their work in trunk.
Feel free to put any changes in trunk now if you want to have it included in the 3.2.2 patch
release.
The main changes are:

1)      Improved temporal models

2)      Minor bug fixes reported in Jira

From: Chen, Pei [mailto:Pei.Chen@childrens.harvard.edu]
Sent: Thursday, March 12, 2015 12:55 PM
To: dev@ctakes.apache.org
Subject: Prep for upcoming cTAKES 3.2.2 Patch Release

I was thinking of creating a 3.2.2 release for Mar (it's long passed the original Jan date?)
 I can volunteer to be the RM again.
There are still plenty of unresolved items... If you plan to have anything you would like
included in the upcoming release, please mark it in Jira and plan the commits accordingly...

Jira Items:
https://issues.apache.org/jira/issues/?jql=fixVersion%20%3D%203.2.2%20AND%20project%20%3D%20CTAKES
1-25 of 25
Columns
T

Patch Info

Key

Summary

Assignee

Reporter

P

Status

Resolution

Created

Updated

Due

[Bug]<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D349&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=OuUBnh20dG00BWWGMKNkCLddKAzEKEiFP3s5uMqcXvU&e=>

CTAKES-349<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D349&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=OuUBnh20dG00BWWGMKNkCLddKAzEKEiFP3s5uMqcXvU&e=>


JdbcWriterTemplate does not store rows if there are fewer than 100 per note<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D349&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=OuUBnh20dG00BWWGMKNkCLddKAzEKEiFP3s5uMqcXvU&e=>

Unassigned

Sean Finan<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_secure_ViewProfile.jspa-3Fname-3Dseanfinan&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=0eQpWYxtyJWqM1JvCN8qkioGRcjID0-QD5k2tf9-1Rc&e=>

[Major]

OPEN

Unresolved

12/Mar/15

12/Mar/15



[Bug]<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D347&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=ja8aLYd7A_7XF8HGNZlgwYtf57IaTkNbKjuO-LfG1Nw&e=>

CTAKES-347<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D347&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=ja8aLYd7A_7XF8HGNZlgwYtf57IaTkNbKjuO-LfG1Nw&e=>


AggregateCdaProcessor fails with URI is not hierarchical<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D347&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=ja8aLYd7A_7XF8HGNZlgwYtf57IaTkNbKjuO-LfG1Nw&e=>

Unassigned

Pei Chen<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_secure_ViewProfile.jspa-3Fname-3Dchenpei&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=oTni0dRNMncNZa8XclTZHjQ6obKXu9M6duLiy4E_O2s&e=>

[Major]

OPEN

Unresolved

02/Feb/15

02/Feb/15



[Improvement]<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D344&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=WcwQCMRJDST_hU4wIa1Q6zF_pa9NqzfX61g6WPlB4YY&e=>

CTAKES-344<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D344&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=WcwQCMRJDST_hU4wIa1Q6zF_pa9NqzfX61g6WPlB4YY&e=>


Add DrugNER to clinical-pipeline<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D344&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=WcwQCMRJDST_hU4wIa1Q6zF_pa9NqzfX61g6WPlB4YY&e=>

Pei Chen<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_secure_ViewProfile.jspa-3Fname-3Dchenpei&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=oTni0dRNMncNZa8XclTZHjQ6obKXu9M6duLiy4E_O2s&e=>

Pei Chen<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_secure_ViewProfile.jspa-3Fname-3Dchenpei&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=oTni0dRNMncNZa8XclTZHjQ6obKXu9M6duLiy4E_O2s&e=>

[Major]

RESOLVED

Fixed

18/Dec/14

18/Dec/14



[Bug]<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D341&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=9mA9vC6pkRQwGlNIFHjgX3Am3T64fX93VbrV1oJndtQ&e=>

CTAKES-341<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D341&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=9mA9vC6pkRQwGlNIFHjgX3Am3T64fX93VbrV1oJndtQ&e=>


FractionFSM annotates incorrect span<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D341&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=9mA9vC6pkRQwGlNIFHjgX3Am3T64fX93VbrV1oJndtQ&e=>

britt fitch<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_secure_ViewProfile.jspa-3Fname-3Dbritt.fitch&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=F5K2zd4RryTOmGZIQho5LuzjuEeWpF-VTqTB1oUklpI&e=>

britt fitch<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_secure_ViewProfile.jspa-3Fname-3Dbritt.fitch&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=F5K2zd4RryTOmGZIQho5LuzjuEeWpF-VTqTB1oUklpI&e=>

[Major]

OPEN

Unresolved

12/Dec/14

12/Dec/14



[Bug]<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D340&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=O7WwUyS6uv3f-u3UPoVnX5oUgLmZhkATH8A75v87mjU&e=>

CTAKES-340<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D340&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=O7WwUyS6uv3f-u3UPoVnX5oUgLmZhkATH8A75v87mjU&e=>


AggregatePlaintextProcessor.xml has invalid xml<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D340&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=O7WwUyS6uv3f-u3UPoVnX5oUgLmZhkATH8A75v87mjU&e=>

Unassigned

Pei Chen<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_secure_ViewProfile.jspa-3Fname-3Dchenpei&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=oTni0dRNMncNZa8XclTZHjQ6obKXu9M6duLiy4E_O2s&e=>

[Minor]

RESOLVED

Fixed

05/Dec/14

05/Dec/14



[Improvement]<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D338&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=0NDZ0IWL_AkO7RYaJ3h4LSIuK7bwmmAeH-514IRvHXk&e=>

CTAKES-338<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D338&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=0NDZ0IWL_AkO7RYaJ3h4LSIuK7bwmmAeH-514IRvHXk&e=>


Download/Unpack full LVG by default<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D338&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=0NDZ0IWL_AkO7RYaJ3h4LSIuK7bwmmAeH-514IRvHXk&e=>

Unassigned

Pei Chen<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_secure_ViewProfile.jspa-3Fname-3Dchenpei&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=oTni0dRNMncNZa8XclTZHjQ6obKXu9M6duLiy4E_O2s&e=>

[Minor]

OPEN

Unresolved

01/Dec/14

01/Dec/14



[Bug]<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D333&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=dFehZmw2RDxGnHTD0RCSSgo7dvNn2QjLmNKJfUtrza0&e=>

CTAKES-333<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D333&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=dFehZmw2RDxGnHTD0RCSSgo7dvNn2QjLmNKJfUtrza0&e=>


jwnl-1.3.3.jar; error in opening zip file<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D333&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=dFehZmw2RDxGnHTD0RCSSgo7dvNn2QjLmNKJfUtrza0&e=>

Pei Chen<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_secure_ViewProfile.jspa-3Fname-3Dchenpei&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=oTni0dRNMncNZa8XclTZHjQ6obKXu9M6duLiy4E_O2s&e=>

Pei Chen<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_secure_ViewProfile.jspa-3Fname-3Dchenpei&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=oTni0dRNMncNZa8XclTZHjQ6obKXu9M6duLiy4E_O2s&e=>

[Major]

RESOLVED

Fixed

18/Nov/14

18/Nov/14



[Bug]<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D332&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=P9UzcxDeds8doVSOhmYwjpC4ZhfFFdyzI8DTmGYH2D8&e=>

CTAKES-332<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D332&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=P9UzcxDeds8doVSOhmYwjpC4ZhfFFdyzI8DTmGYH2D8&e=>


Upgrade to OpenNLP 1.5.2 -> 1.5.3<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D332&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=P9UzcxDeds8doVSOhmYwjpC4ZhfFFdyzI8DTmGYH2D8&e=>

Pei Chen<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_secure_ViewProfile.jspa-3Fname-3Dchenpei&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=oTni0dRNMncNZa8XclTZHjQ6obKXu9M6duLiy4E_O2s&e=>

Pei Chen<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_secure_ViewProfile.jspa-3Fname-3Dchenpei&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=oTni0dRNMncNZa8XclTZHjQ6obKXu9M6duLiy4E_O2s&e=>

[Minor]

RESOLVED

Fixed

18/Nov/14

18/Nov/14



[Improvement]<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D328&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=Ph_oOi_d6Uq0-7ktFjRj6sDiCLXUswAeabl0I6WgJyA&e=>

CTAKES-328<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D328&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=Ph_oOi_d6Uq0-7ktFjRj6sDiCLXUswAeabl0I6WgJyA&e=>


Clean up XML Annotator Descriptors<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D328&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=Ph_oOi_d6Uq0-7ktFjRj6sDiCLXUswAeabl0I6WgJyA&e=>

Unassigned

Pei Chen<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_secure_ViewProfile.jspa-3Fname-3Dchenpei&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=oTni0dRNMncNZa8XclTZHjQ6obKXu9M6duLiy4E_O2s&e=>

[Major]

OPEN

Unresolved

04/Nov/14

04/Nov/14



[Bug]<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D320&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=HL30Mvt59Ofv_W4MuyJcEqTwHbSFfj8QLSS6A_xGibM&e=>

CTAKES-320<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D320&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=HL30Mvt59Ofv_W4MuyJcEqTwHbSFfj8QLSS6A_xGibM&e=>


Methods used by getDefaultPipeline should be able to load reasonable defaults without expecting
external files.<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D320&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=HL30Mvt59Ofv_W4MuyJcEqTwHbSFfj8QLSS6A_xGibM&e=>

Unassigned

jay vyas<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_secure_ViewProfile.jspa-3Fname-3Djayunit100&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=xd9lKfUvrE7UKxKaRFIuxlaF81Vt0fB_K-RoKdiQhgA&e=>

[Major]

OPEN

Unresolved

11/Oct/14

23/Nov/14



[Bug]<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D302&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=hpXIikT1KsHHNxQ6pCgLUhRf5jB9G5pI6q6Mrcyn5rc&e=>

CTAKES-302<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D302&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=hpXIikT1KsHHNxQ6pCgLUhRf5jB9G5pI6q6Mrcyn5rc&e=>


Element type "hibernate-mapping" must be followed by either attribute specifications, ">"
or "/>".<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D302&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=hpXIikT1KsHHNxQ6pCgLUhRf5jB9G5pI6q6Mrcyn5rc&e=>

Unassigned

James Joseph Masanz<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_secure_ViewProfile.jspa-3Fname-3Djames-2Dmasanz&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=ZQ5XbznHDPTlyQj2x6xlobJ1wVtYme4ySlH6Lyk0ygI&e=>

[Major]

OPEN

Unresolved

27/Jun/14

07/Nov/14



[Improvement]<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D295&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=NwinwTu3E-d8Sr3patmWv33XdZ3quio1ZNpFJol5J3I&e=>

CTAKES-295<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D295&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=NwinwTu3E-d8Sr3patmWv33XdZ3quio1ZNpFJol5J3I&e=>


Use UIMAFit-style configuration annotations<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D295&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=NwinwTu3E-d8Sr3patmWv33XdZ3quio1ZNpFJol5J3I&e=>

Unassigned

Tim Miller<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_secure_ViewProfile.jspa-3Fname-3Dtmill&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=4W4EBFr8XLaVyxcl4jkgLIxVSGoDT1XUfiACmLLrFnM&e=>

[Minor]

OPEN

Unresolved

15/Apr/14

07/Nov/14



[Bug]<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D275&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=VtlyFgJ5ZTsqiMylG_SMSqduTp-tkMgz48QSbQG_fO8&e=>

CTAKES-275<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D275&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=VtlyFgJ5ZTsqiMylG_SMSqduTp-tkMgz48QSbQG_fO8&e=>


some of the older junit tests don't have the right Project name in the run configurations<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D275&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=VtlyFgJ5ZTsqiMylG_SMSqduTp-tkMgz48QSbQG_fO8&e=>

Unassigned

James Joseph Masanz<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_secure_ViewProfile.jspa-3Fname-3Djames-2Dmasanz&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=ZQ5XbznHDPTlyQj2x6xlobJ1wVtYme4ySlH6Lyk0ygI&e=>

[Minor]

OPEN

Unresolved

29/Nov/13

07/Nov/14



[Task]<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D232&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=9Otav5ryLTVGwBM22s9MwLbhCWpLthrvKqUwc6HFyBY&e=>

CTAKES-232<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D232&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=9Otav5ryLTVGwBM22s9MwLbhCWpLthrvKqUwc6HFyBY&e=>


change concept type<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D232&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=9Otav5ryLTVGwBM22s9MwLbhCWpLthrvKqUwc6HFyBY&e=>

Unassigned

Tim Miller<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_secure_ViewProfile.jspa-3Fname-3Dtmill&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=4W4EBFr8XLaVyxcl4jkgLIxVSGoDT1XUfiACmLLrFnM&e=>

[Minor]

OPEN

Unresolved

02/Sep/13

07/Nov/14



[Bug]<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D213&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=mBYyaG8R_4qOEocnqjaERYpN1szk3_TeWE172aag9AI&e=>

CTAKES-213<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D213&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=mBYyaG8R_4qOEocnqjaERYpN1szk3_TeWE172aag9AI&e=>


ModifierExtractorAnnotator should produce XxxxModifier subtypes<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D213&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=mBYyaG8R_4qOEocnqjaERYpN1szk3_TeWE172aag9AI&e=>

Unassigned

Steven Bethard<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_secure_ViewProfile.jspa-3Fname-3Dsteven.bethard&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=XbKCCzU7sMe_0LsndLL705t0mV63VZ60K3-BbHgA0Ks&e=>

[Major]

OPEN

Unresolved

27/Jun/13

07/Nov/14



[Bug]<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D178&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=jrlr31kYU5AU8ArcpIus538MxWbPRdUyqhnwHYr-YAY&e=>

CTAKES-178<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D178&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=jrlr31kYU5AU8ArcpIus538MxWbPRdUyqhnwHYr-YAY&e=>


parsing of medication strength does not verify a number was discovered (strength value includes
both the dosage and strength value in some cases)<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D178&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=jrlr31kYU5AU8ArcpIus538MxWbPRdUyqhnwHYr-YAY&e=>

James Joseph Masanz<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_secure_ViewProfile.jspa-3Fname-3Djames-2Dmasanz&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=ZQ5XbznHDPTlyQj2x6xlobJ1wVtYme4ySlH6Lyk0ygI&e=>

James Joseph Masanz<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_secure_ViewProfile.jspa-3Fname-3Djames-2Dmasanz&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=ZQ5XbznHDPTlyQj2x6xlobJ1wVtYme4ySlH6Lyk0ygI&e=>

[Major]

OPEN

Unresolved

19/Mar/13

07/Nov/14



[Improvement]<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D172&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=uN61qXVIcijDFxdcbuhbrRbrqLTA-0Rjb1yh_8zLAcY&e=>

CTAKES-172<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D172&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=uN61qXVIcijDFxdcbuhbrRbrqLTA-0Rjb1yh_8zLAcY&e=>


relation-extractor is using StatusAnnotator and NegationAnnotator instead of AssertionAnnotator<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D172&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=uN61qXVIcijDFxdcbuhbrRbrqLTA-0Rjb1yh_8zLAcY&e=>

Unassigned

James Joseph Masanz<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_secure_ViewProfile.jspa-3Fname-3Djames-2Dmasanz&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=ZQ5XbznHDPTlyQj2x6xlobJ1wVtYme4ySlH6Lyk0ygI&e=>

[Major]

OPEN

Unresolved

25/Feb/13

07/Nov/14



[Bug]<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D155&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=T2L74MYb6bhw14GtPBES9nDxomx9NMQ7QzC2Gi-tBxU&e=>

CTAKES-155<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D155&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=T2L74MYb6bhw14GtPBES9nDxomx9NMQ7QzC2Gi-tBxU&e=>


SimpleSegmentWithTagsAnnotator assumes all section names are 5 characters<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D155&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=T2L74MYb6bhw14GtPBES9nDxomx9NMQ7QzC2Gi-tBxU&e=>

Unassigned

Steven Bethard<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_secure_ViewProfile.jspa-3Fname-3Dsteven.bethard&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=XbKCCzU7sMe_0LsndLL705t0mV63VZ60K3-BbHgA0Ks&e=>

[Major]

OPEN

Unresolved

08/Feb/13

07/Nov/14



[Task]<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D138&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=8Spv4Kqo9PgjvNgGtbij0fjTKoAzIHqF8jaKcIB2Fg0&e=>

CTAKES-138<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D138&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=8Spv4Kqo9PgjvNgGtbij0fjTKoAzIHqF8jaKcIB2Fg0&e=>


Remove 3rd party jars from our SVN<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D138&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=8Spv4Kqo9PgjvNgGtbij0fjTKoAzIHqF8jaKcIB2Fg0&e=>

James Joseph Masanz<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_secure_ViewProfile.jspa-3Fname-3Djames-2Dmasanz&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=ZQ5XbznHDPTlyQj2x6xlobJ1wVtYme4ySlH6Lyk0ygI&e=>

James Joseph Masanz<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_secure_ViewProfile.jspa-3Fname-3Djames-2Dmasanz&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=ZQ5XbznHDPTlyQj2x6xlobJ1wVtYme4ySlH6Lyk0ygI&e=>

[Critical]

OPEN

Unresolved

31/Jan/13

07/Nov/14



[Sub-task]<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D124&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=6AjBWij1dn8qnTd_200NvVYOpC2B9_qdNn-uM8-Lrmc&e=>

CTAKES-124<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D124&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=6AjBWij1dn8qnTd_200NvVYOpC2B9_qdNn-uM8-Lrmc&e=>


CTAKES-199<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D199&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=VE7v4jYnutBhKT4_Z5x8nWpOkJzubtJ4nvOrSuztX8c&e=>
remove internal UIMA types from coreference<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D124&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=6AjBWij1dn8qnTd_200NvVYOpC2B9_qdNn-uM8-Lrmc&e=>

Tim Miller<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_secure_ViewProfile.jspa-3Fname-3Dtmill&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=4W4EBFr8XLaVyxcl4jkgLIxVSGoDT1XUfiACmLLrFnM&e=>

Tim Miller<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_secure_ViewProfile.jspa-3Fname-3Dtmill&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=4W4EBFr8XLaVyxcl4jkgLIxVSGoDT1XUfiACmLLrFnM&e=>

[Minor]

OPEN

Unresolved

07/Jan/13

07/Nov/14



[Improvement]<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D122&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=mU7sYTgj4ZSp3Jr1YSs82DfDUMPAdX-owsClqHfsVCg&e=>

CTAKES-122<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D122&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=mU7sYTgj4ZSp3Jr1YSs82DfDUMPAdX-owsClqHfsVCg&e=>


include LVG with a future version of cTAKES?<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D122&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=mU7sYTgj4ZSp3Jr1YSs82DfDUMPAdX-owsClqHfsVCg&e=>

James Joseph Masanz<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_secure_ViewProfile.jspa-3Fname-3Djames-2Dmasanz&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=ZQ5XbznHDPTlyQj2x6xlobJ1wVtYme4ySlH6Lyk0ygI&e=>

James Joseph Masanz<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_secure_ViewProfile.jspa-3Fname-3Djames-2Dmasanz&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=ZQ5XbznHDPTlyQj2x6xlobJ1wVtYme4ySlH6Lyk0ygI&e=>

[Major]

OPEN

Unresolved

19/Dec/12

01/Dec/14

29/Jan/13

[Improvement]<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D78&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=2dg4uqUZLgUbt7Xt_VkzRJWgUy4bWFGnN1HfxVAiRB0&e=>

CTAKES-78<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D78&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=2dg4uqUZLgUbt7Xt_VkzRJWgUy4bWFGnN1HfxVAiRB0&e=>


Update Chunker unit tests<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D78&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=2dg4uqUZLgUbt7Xt_VkzRJWgUy4bWFGnN1HfxVAiRB0&e=>

Unassigned

Pei Chen<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_secure_ViewProfile.jspa-3Fname-3Dchenpei&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=oTni0dRNMncNZa8XclTZHjQ6obKXu9M6duLiy4E_O2s&e=>

[Minor]

OPEN

Unresolved

12/Oct/12

07/Nov/14



[Improvement]<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D77&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=zr7FVzCXM5tJeQ3vWz8WBU823NHpgF0aFleHTBHtz90&e=>

CTAKES-77<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D77&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=zr7FVzCXM5tJeQ3vWz8WBU823NHpgF0aFleHTBHtz90&e=>


Update POSTagger Unit Tests<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D77&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=zr7FVzCXM5tJeQ3vWz8WBU823NHpgF0aFleHTBHtz90&e=>

Unassigned

Pei Chen<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_secure_ViewProfile.jspa-3Fname-3Dchenpei&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=oTni0dRNMncNZa8XclTZHjQ6obKXu9M6duLiy4E_O2s&e=>

[Minor]

OPEN

Unresolved

12/Oct/12

07/Nov/14



[Bug]<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D76&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=B6Elzjw3_9YV-ArH2WU2eWty5ojnIZNWiwQoPk8TCCE&e=>

CTAKES-76<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D76&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=B6Elzjw3_9YV-ArH2WU2eWty5ojnIZNWiwQoPk8TCCE&e=>


get third party dependencies into Maven Central<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D76&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=B6Elzjw3_9YV-ArH2WU2eWty5ojnIZNWiwQoPk8TCCE&e=>

Unassigned

Steven Bethard<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_secure_ViewProfile.jspa-3Fname-3Dsteven.bethard&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=XbKCCzU7sMe_0LsndLL705t0mV63VZ60K3-BbHgA0Ks&e=>

[Blocker]

REOPENED

Unresolved

10/Oct/12

07/Nov/14



[Task]<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D74&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=FwrUoMosTUVfrA6pIRkJo0Zganun18KBXtCImqcS2Vo&e=>

CTAKES-74<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D74&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=FwrUoMosTUVfrA6pIRkJo0Zganun18KBXtCImqcS2Vo&e=>


Tokenizer PennTreeBank breaks with certain apostrophes in tokens.<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_browse_CTAKES-2D74&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=FwrUoMosTUVfrA6pIRkJo0Zganun18KBXtCImqcS2Vo&e=>

Unassigned

Pei Chen<https://urldefense.proofpoint.com/v2/url?u=https-3A__issues.apache.org_jira_secure_ViewProfile.jspa-3Fname-3Dchenpei&d=BQMFAg&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=huK2MFkj300qccT8OSuuoYhy_xEYujfPwiAxhPVz5WY&m=pMfOtBAj84JGCJYU-ZSZ6Ac5QC_d7g8ZReRfZu12U4s&s=oTni0dRNMncNZa8XclTZHjQ6obKXu9M6duLiy4E_O2s&e=>

[Critical]

OPEN

Unresolved

08/Oct/12

07/Nov/14



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