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From Maite Meseure Hugues <meseure.ma...@gmail.com>
Subject Re: BagOfCuisGenerator.java, same idea for getConceptText()
Date Tue, 17 Feb 2015 15:50:33 GMT
Hi Sean,

Thank you for this additional info.
Have a good day.

Maite

On Tue, Feb 17, 2015 at 9:41 AM, Finan, Sean <
Sean.Finan@childrens.harvard.edu> wrote:

> Hi Maite,
>
> I just checked the log and it looks like you'll need to use a copy of
> cTakes built after 12/08/2014 to get Snomed codes.
>
> Sean
>
> -----Original Message-----
> From: Maite Meseure Hugues [mailto:meseure.maite@gmail.com]
> Sent: Monday, February 16, 2015 12:19 PM
> To: dev@ctakes.apache.org
> Subject: Re: BagOfCuisGenerator.java, same idea for getConceptText()
>
> Sean, I have a question, is it because I am using fast dictionary I don't
> get snomed-oid or snomed-code? Instead, it's " snomed_oid: null#CTAKES".
> Thank you.
>
> Maite
>
> On Fri, Feb 13, 2015 at 1:32 PM, Maite Meseure Hugues <
> meseure.maite@gmail.com> wrote:
>
> > Thank you for your replies, It's helpful. I was working on 3.2.0
> > version, so it looks like 3.2.1 allows to get the UMLS preferred text.
> >
> > Maite
> >
> > On Thu, Feb 12, 2015 at 2:25 PM, Finan, Sean <
> > Sean.Finan@childrens.harvard.edu> wrote:
> >
> >> Oh yeah - use the -fast dictionary to get preferred text.  The
> >> fastest way to get cuis only is with CuisOnlyPlaintextUMLSProcessor.
> >> If you want polarity make sure you uncomment the section with
> >> PolarityCleartkAnalysisEngine.
> >>
> >> Sean
> >>
> >> -----Original Message-----
> >> From: Maite Meseure Hugues [mailto:meseure.maite@gmail.com]
> >> Sent: Thursday, February 12, 2015 2:46 PM
> >> To: dev@ctakes.apache.org
> >> Subject: BagOfCuisGenerator.java, same idea for getConceptText()
> >>
> >> Hi everyone,
> >>
> >> I am currently working on BagOfCuisGenerator, and I would like to add
> >> the concept text to the output.
> >> I 've seen some discussions about getting the original text and UMLS
> >> preferred text in addition to the cui. Can someone give me pointers
> >> to do that?
> >> Thanks in advance for your time.
> >>
> >> Maite
> >>
> >> --
> >> --
> >>  Maïté Meseure Hugues
> >>
> >
> >
> >
> > --
> > --
> >  Maïté Meseure Hugues
> >
> >
>
>
> --
> --
>  Maïté Meseure Hugues
>



-- 
--
 Maïté Meseure Hugues

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