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From "Finan, Sean" <Sean.Fi...@childrens.harvard.edu>
Subject RE: BagOfCuisGenerator.java, same idea for getConceptText()
Date Tue, 17 Feb 2015 15:41:06 GMT
Hi Maite,

I just checked the log and it looks like you'll need to use a copy of cTakes built after 12/08/2014
to get Snomed codes.

Sean

-----Original Message-----
From: Maite Meseure Hugues [mailto:meseure.maite@gmail.com] 
Sent: Monday, February 16, 2015 12:19 PM
To: dev@ctakes.apache.org
Subject: Re: BagOfCuisGenerator.java, same idea for getConceptText()

Sean, I have a question, is it because I am using fast dictionary I don't get snomed-oid or
snomed-code? Instead, it's " snomed_oid: null#CTAKES".
Thank you.

Maite

On Fri, Feb 13, 2015 at 1:32 PM, Maite Meseure Hugues < meseure.maite@gmail.com> wrote:

> Thank you for your replies, It's helpful. I was working on 3.2.0 
> version, so it looks like 3.2.1 allows to get the UMLS preferred text.
>
> Maite
>
> On Thu, Feb 12, 2015 at 2:25 PM, Finan, Sean < 
> Sean.Finan@childrens.harvard.edu> wrote:
>
>> Oh yeah - use the -fast dictionary to get preferred text.  The 
>> fastest way to get cuis only is with CuisOnlyPlaintextUMLSProcessor.  
>> If you want polarity make sure you uncomment the section with 
>> PolarityCleartkAnalysisEngine.
>>
>> Sean
>>
>> -----Original Message-----
>> From: Maite Meseure Hugues [mailto:meseure.maite@gmail.com]
>> Sent: Thursday, February 12, 2015 2:46 PM
>> To: dev@ctakes.apache.org
>> Subject: BagOfCuisGenerator.java, same idea for getConceptText()
>>
>> Hi everyone,
>>
>> I am currently working on BagOfCuisGenerator, and I would like to add 
>> the concept text to the output.
>> I 've seen some discussions about getting the original text and UMLS 
>> preferred text in addition to the cui. Can someone give me pointers 
>> to do that?
>> Thanks in advance for your time.
>>
>> Maite
>>
>> --
>> --
>>  Maïté Meseure Hugues
>>
>
>
>
> --
> --
>  Maïté Meseure Hugues
>
>


--
--
 Maïté Meseure Hugues
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