Return-Path: X-Original-To: apmail-ctakes-dev-archive@www.apache.org Delivered-To: apmail-ctakes-dev-archive@www.apache.org Received: from mail.apache.org (hermes.apache.org [140.211.11.3]) by minotaur.apache.org (Postfix) with SMTP id 2DA9C11FA0 for ; Thu, 3 Jul 2014 17:33:18 +0000 (UTC) Received: (qmail 56180 invoked by uid 500); 3 Jul 2014 17:33:18 -0000 Delivered-To: apmail-ctakes-dev-archive@ctakes.apache.org Received: (qmail 56125 invoked by uid 500); 3 Jul 2014 17:33:18 -0000 Mailing-List: contact dev-help@ctakes.apache.org; run by ezmlm Precedence: bulk List-Help: List-Unsubscribe: List-Post: List-Id: Reply-To: dev@ctakes.apache.org Delivered-To: mailing list dev@ctakes.apache.org Received: (qmail 56112 invoked by uid 99); 3 Jul 2014 17:33:17 -0000 Received: from nike.apache.org (HELO nike.apache.org) (192.87.106.230) by apache.org (qpsmtpd/0.29) with ESMTP; Thu, 03 Jul 2014 17:33:17 +0000 X-ASF-Spam-Status: No, hits=3.2 required=5.0 tests=HTML_IMAGE_ONLY_20,HTML_MESSAGE,HTML_SHORT_LINK_IMG_3,RCVD_IN_DNSWL_LOW,SPF_NEUTRAL,T_REMOTE_IMAGE X-Spam-Check-By: apache.org Received-SPF: neutral (nike.apache.org: local policy) Received: from [74.125.82.180] (HELO mail-we0-f180.google.com) (74.125.82.180) by apache.org (qpsmtpd/0.29) with ESMTP; Thu, 03 Jul 2014 17:33:15 +0000 Received: by mail-we0-f180.google.com with SMTP id x48so593942wes.11 for ; Thu, 03 Jul 2014 10:32:50 -0700 (PDT) X-Google-DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=1e100.net; s=20130820; h=x-gm-message-state:mime-version:date:message-id:subject:from:to :content-type; bh=Zt9OJnVrCz0EeqmHI2IManxbhSAzu7AI0v3e6quQcus=; b=dt1EDIuAAFiNjXFvvLUaEtiXpMAALkqLrAAt5GyFNGjlE8O3AbX1fKyQB1mCi344Zk 1C8DCyL3mNR+aJ82UIZeh2++8lfuI8RNYLU9Ct/dlS20lQeyulEioeax+9vXYTVUEfs/ wg8Wxl8Yze2LGmMOrMtp6RTd7X0yQNkjAusIK2bs26dVKYaVbiZMu7sLX+KIvCErHG88 84TNZAoTmUqP6V0NYBfpFPEmgquogC3hyUv9EvDPQJA3DMeK3vw/s+bhosyok9OUAma6 dwjGxPDgCKsGv2Y/qDCN4Mv3GCQU4WU2Hkwq/xb0BXWNjiBeea4VfLur+Ha+Sx4UcSRF 2R9Q== X-Gm-Message-State: ALoCoQnhukX7bhuyA2Cu+j/tkNF2jNNAAzj7AVLhvjMIimA4r3Y3CNrf831VI7n6xbCM5SU++n2y MIME-Version: 1.0 X-Received: by 10.194.92.148 with SMTP id cm20mr6458924wjb.57.1404408769921; Thu, 03 Jul 2014 10:32:49 -0700 (PDT) Received: by 10.194.139.173 with HTTP; Thu, 3 Jul 2014 10:32:49 -0700 (PDT) Date: Thu, 3 Jul 2014 11:32:49 -0600 Message-ID: Subject: Converting UMLS codes to SNOMED codes using the YTEX pipeline From: Bruce Tietjen To: dev@ctakes.apache.org Content-Type: multipart/alternative; boundary=047d7bfd0166d9dd3604fd4d659e X-Virus-Checked: Checked by ClamAV on apache.org --047d7bfd0166d9dd3604fd4d659e Content-Type: text/plain; charset=UTF-8 I've been playing around with 3.1 and 3.2 rc1 using the YTEX pipeline. I noticed that the output generated by the YTEX pipeline outputs the UMLS codes. Is there an easy way to convert the UMLS codes to SNOMED codes? I had expected that the LookupDesc_SNOMED.xml might handle that, but then noticed that the LookupConsumer identified there specifically uses the UMLS codingscheme. Or is there a reason why the ytex pipeline should not produce SNOMED codes? Thanks, Bruce Tietjen [image: IMAT Solutions] Bruce Tietjen Senior Software Engineer [image: Mobile:] 801.634.1547 bruce.tietjen@imatsolutions.com --047d7bfd0166d9dd3604fd4d659e--