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From Pei Chen <chen...@apache.org>
Subject [CANCELLED] [VOTE] Release Apache cTAKES 3.2.0
Date Tue, 08 Jul 2014 21:20:25 GMT
Cancelling the rc-1.
Will send out another vote thread for RC2 shortly.

--Pei


On Tue, Jul 8, 2014 at 10:53 AM, Pei Chen <chenpei@apache.org> wrote:

> It's the latter:
> the -src is basically the same as the dev install w/o the subversion
> checkout step...
>
>
> On Tue, Jul 8, 2014 at 7:15 AM, Miller, Timothy <
> Timothy.Miller@childrens.harvard.edu> wrote:
>
>> One other thing -- the User install guide says to download the -bin and
>> the Dev install guide has you checking out from trunk. And the README in
>> the -src distribution has instructions that only make sense for the -bin
>> distribution.
>> Are there instructions somewhere for how to install the -src version or
>> are they basically the same as the dev install w/o the subversion checkout
>> step?
>>
>> Tim
>>
>> ________________________________________
>> From: Pei Chen [chenpei@apache.org]
>> Sent: Monday, July 07, 2014 12:06 PM
>> To: dev@ctakes.apache.org
>> Subject: Re: [VOTE] Release Apache cTAKES 3.2.0
>>
>> Thanks for testing this Tim.  I could recreate this on my mac now (worked
>> previously on windows on luck because of the class load order).
>> Essentially, the old mitre assertion module and LVG resources still need
>> to
>> be unpacked.  We don't have access to modify the underlying lib to read
>> from a stream, I'm just going to omit/exclude the redundant
>> ctakes-assertion-res.jar from the distro (as the assertion module will be
>> updated in the future release anyway).
>> Let me know if you encounter anything else, otherwise will plan to create
>> an RC-2.
>>
>>
>> On Fri, Jul 4, 2014 at 12:01 PM, Miller, Timothy <
>> Timothy.Miller@childrens.harvard.edu> wrote:
>>
>> > I get an error when I try to run the CVD following the README
>> instructions
>> > for the binary release:
>> >
>> > 7/4/14 11:56:03 AM - 12:
>> > org.apache.uima.tools.cvd.MainFrame.handleException(527): SEVERE:
>> > Initialization of annotator class
>> > "org.apache.ctakes.assertion.medfacts.AssertionAnalysisEngine" failed.
>> >  (Descriptor:
>> >
>> file:/home/tmill/Projects/sandbox/ctakes-rcs/apache-ctakes-3.2.0/desc/ctakes-assertion/desc/assertionAnalysisEngine.xml)
>> > org.apache.uima.resource.ResourceInitializationException: Initialization
>> > of annotator class
>> > "org.apache.ctakes.assertion.medfacts.AssertionAnalysisEngine" failed.
>> >  (Descriptor:
>> >
>> file:/home/tmill/Projects/sandbox/ctakes-rcs/apache-ctakes-3.2.0/desc/ctakes-assertion/desc/assertionAnalysisEngine.xml)
>> >         at
>> >
>> org.apache.uima.analysis_engine.impl.PrimitiveAnalysisEngine_impl.initializeAnalysisComponent(PrimitiveAnalysisEngine_impl.java:252)
>> >         at
>> >
>> org.apache.uima.analysis_engine.impl.PrimitiveAnalysisEngine_impl.initialize(PrimitiveAnalysisEngine_impl.java:156)
>> >         at
>> >
>> org.apache.uima.impl.AnalysisEngineFactory_impl.produceResource(AnalysisEngineFactory_impl.java:94)
>> >         at
>> >
>> org.apache.uima.impl.CompositeResourceFactory_impl.produceResource(CompositeResourceFactory_impl.java:62)
>> >         at
>> > org.apache.uima.UIMAFramework.produceResource(UIMAFramework.java:269)
>> >         at
>> >
>> org.apache.uima.UIMAFramework.produceAnalysisEngine(UIMAFramework.java:387)
>> >         at
>> >
>> org.apache.uima.analysis_engine.asb.impl.ASB_impl.setup(ASB_impl.java:254)
>> >         at
>> >
>> org.apache.uima.analysis_engine.impl.AggregateAnalysisEngine_impl.initASB(AggregateAnalysisEngine_impl.java:431)
>> >         at
>> >
>> org.apache.uima.analysis_engine.impl.AggregateAnalysisEngine_impl.initializeAggregateAnalysisEngine(AggregateAnalysisEngine_impl.java:375)
>> >         at
>> >
>> org.apache.uima.analysis_engine.impl.AggregateAnalysisEngine_impl.initialize(AggregateAnalysisEngine_impl.java:185)
>> >         at
>> >
>> org.apache.uima.impl.AnalysisEngineFactory_impl.produceResource(AnalysisEngineFactory_impl.java:94)
>> >         at
>> >
>> org.apache.uima.impl.CompositeResourceFactory_impl.produceResource(CompositeResourceFactory_impl.java:62)
>> >         at
>> > org.apache.uima.UIMAFramework.produceResource(UIMAFramework.java:269)
>> >         at
>> >
>> org.apache.uima.UIMAFramework.produceAnalysisEngine(UIMAFramework.java:387)
>> >         at
>> >
>> org.apache.uima.analysis_engine.asb.impl.ASB_impl.setup(ASB_impl.java:254)
>> >         at
>> >
>> org.apache.uima.analysis_engine.impl.AggregateAnalysisEngine_impl.initASB(AggregateAnalysisEngine_impl.java:431)
>> >         at
>> >
>> org.apache.uima.analysis_engine.impl.AggregateAnalysisEngine_impl.initializeAggregateAnalysisEngine(AggregateAnalysisEngine_impl.java:375)
>> >         at
>> >
>> org.apache.uima.analysis_engine.impl.AggregateAnalysisEngine_impl.initialize(AggregateAnalysisEngine_impl.java:185)
>> >         at
>> >
>> org.apache.uima.impl.AnalysisEngineFactory_impl.produceResource(AnalysisEngineFactory_impl.java:94)
>> >         at
>> >
>> org.apache.uima.impl.CompositeResourceFactory_impl.produceResource(CompositeResourceFactory_impl.java:62)
>> >         at
>> > org.apache.uima.UIMAFramework.produceResource(UIMAFramework.java:269)
>> >         at
>> >
>> org.apache.uima.UIMAFramework.produceAnalysisEngine(UIMAFramework.java:354)
>> >         at
>> org.apache.uima.tools.cvd.MainFrame.setupAE(MainFrame.java:1484)
>> >         at
>> > org.apache.uima.tools.cvd.MainFrame.loadAEDescriptor(MainFrame.java:477)
>> >         at
>> >
>> org.apache.uima.tools.cvd.control.AnnotatorOpenEventHandler.actionPerformed(AnnotatorOpenEventHandler.java:52)
>> >         at
>> > javax.swing.AbstractButton.fireActionPerformed(AbstractButton.java:2018)
>> >         at
>> >
>> javax.swing.AbstractButton$Handler.actionPerformed(AbstractButton.java:2341)
>> >         at
>> >
>> javax.swing.DefaultButtonModel.fireActionPerformed(DefaultButtonModel.java:402)
>> >         at
>> > javax.swing.DefaultButtonModel.setPressed(DefaultButtonModel.java:259)
>> >         at javax.swing.AbstractButton.doClick(AbstractButton.java:376)
>> >         at
>> > javax.swing.plaf.basic.BasicMenuItemUI.doClick(BasicMenuItemUI.java:833)
>> >         at
>> >
>> javax.swing.plaf.basic.BasicMenuItemUI$Handler.mouseReleased(BasicMenuItemUI.java:877)
>> >         at java.awt.Component.processMouseEvent(Component.java:6505)
>> >         at
>> javax.swing.JComponent.processMouseEvent(JComponent.java:3311)
>> >         at java.awt.Component.processEvent(Component.java:6270)
>> >         at java.awt.Container.processEvent(Container.java:2229)
>> >         at java.awt.Component.dispatchEventImpl(Component.java:4861)
>> >         at java.awt.Container.dispatchEventImpl(Container.java:2287)
>> >         at java.awt.Component.dispatchEvent(Component.java:4687)
>> >         at
>> > java.awt.LightweightDispatcher.retargetMouseEvent(Container.java:4832)
>> >         at
>> > java.awt.LightweightDispatcher.processMouseEvent(Container.java:4492)
>> >         at
>> > java.awt.LightweightDispatcher.dispatchEvent(Container.java:4422)
>> >         at java.awt.Container.dispatchEventImpl(Container.java:2273)
>> >         at java.awt.Window.dispatchEventImpl(Window.java:2719)
>> >         at java.awt.Component.dispatchEvent(Component.java:4687)
>> >         at java.awt.EventQueue.dispatchEventImpl(EventQueue.java:735)
>> >         at java.awt.EventQueue.access$200(EventQueue.java:103)
>> >         at java.awt.EventQueue$3.run(EventQueue.java:694)
>> >         at java.awt.EventQueue$3.run(EventQueue.java:692)
>> >         at java.security.AccessController.doPrivileged(Native Method)
>> >         at
>> >
>> java.security.ProtectionDomain$1.doIntersectionPrivilege(ProtectionDomain.java:76)
>> >         at
>> >
>> java.security.ProtectionDomain$1.doIntersectionPrivilege(ProtectionDomain.java:87)
>> >         at java.awt.EventQueue$4.run(EventQueue.java:708)
>> >         at java.awt.EventQueue$4.run(EventQueue.java:706)
>> >         at java.security.AccessController.doPrivileged(Native Method)
>> >         at
>> >
>> java.security.ProtectionDomain$1.doIntersectionPrivilege(ProtectionDomain.java:76)
>> >         at java.awt.EventQueue.dispatchEvent(EventQueue.java:705)
>> >         at
>> >
>> java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:242)
>> >         at
>> >
>> java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:161)
>> >         at
>> >
>> java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:150)
>> >         at
>> > java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:146)
>> >         at
>> > java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:138)
>> >         at java.awt.EventDispatchThread.run(EventDispatchThread.java:91)
>> > Caused by: java.lang.RuntimeException: problem accessing resource
>> >         at
>> >
>> org.apache.ctakes.assertion.medfacts.AssertionAnalysisEngine.initialize(AssertionAnalysisEngine.java:114)
>> >         at
>> >
>> org.apache.uima.analysis_engine.impl.PrimitiveAnalysisEngine_impl.initializeAnalysisComponent(PrimitiveAnalysisEngine_impl.java:250)
>> >         ... 62 more
>> > Caused by: org.apache.uima.resource.ResourceAccessException
>> >         at
>> >
>> org.apache.uima.impl.UimaContext_ImplBase.getResourceFilePath(UimaContext_ImplBase.java:253)
>> >         at
>> >
>> org.apache.ctakes.assertion.medfacts.AssertionAnalysisEngine.initialize(AssertionAnalysisEngine.java:93)
>> >         ... 63 more
>> >
>> >
>> > ________________________________________
>> > From: Finan, Sean [Sean.Finan@childrens.harvard.edu]
>> > Sent: Wednesday, July 02, 2014 3:49 PM
>> > To: dev@ctakes.apache.org
>> > Subject: RE: [VOTE] Release Apache cTAKES 3.2.0
>> >
>> > +1
>> >
>> > Pulled fresh candidate, built, and ran Clinical using CPE without
>> problem.
>> >  Other than that, no testing.  SVN gave me a problem initially (checked
>> out
>> > as anonymous) asking for a password then flunking the checkout, but an
>> > update completed it.  I blame the heat.
>> > ________________________________________
>> > From: Masanz, James J. [Masanz.James@mayo.edu]
>> > Sent: Monday, June 30, 2014 10:24 PM
>> > To: dev@ctakes.apache.org
>> > Subject: RE: [VOTE] Release Apache cTAKES 3.2.0
>> >
>> > This is pretty obvious, but since this is a record of what was voted
>> upon,
>> > note that some of the URLs contain an extra
>> >
>> > ctakes-3.2.0/
>> >
>> > For example
>> >
>> >
>> http://people.apache.org/~chenpei/RCs/ctakes-3.2.0/ctakes-3.2.0/apache-ctakes-3.2.0-src.tar.gz
>> >
>> > should be just
>> >
>> >
>> http://people.apache.org/~chenpei/RCs/ctakes-3.2.0/apache-ctakes-3.2.0-src.tar.gz
>> >
>> > -- James
>> >
>> > ________________________________________
>> > From: Pei Chen [chenpei@apache.org]
>> > Sent: Friday, June 27, 2014 5:15 PM
>> > To: dev@ctakes.apache.org
>> > Subject: [VOTE] Release Apache cTAKES 3.2.0
>> >
>> > Hi all,
>> >
>> > This is a call for a vote on releasing the following candidate (rc1) as
>> > Apache cTAKES 3.2.0.
>> > The major changes include:
>> > - New optional YTEX component(s) (Yale Extensions to cTAKES)
>> > - New optional improved/faster dictionary lookup
>> (dictionary-lookup-fast)
>> > - New optional Temporal component (Time + Event extraction.  Relations
>> will
>> > be including in a future release.)
>> > - Other bug fixes/enhancements from Jira
>> >
>> > [TODO: Online documentation still needs to be updated on wiki for the
>> abo]
>> >
>> > For more detailed information on the changes/release notes, please
>> visit:
>> >
>> >
>> https://issues.apache.org/jira/secure/ReleaseNote.jspa?projectId=12313621&version=12324066
>> >
>> > The release was made using the cTAKES release process documented here:
>> > http://ctakes.apache.org/ctakes-release-guide.html
>> >
>> > The candidate is available at:
>> >
>> >
>> http://people.apache.org/~chenpei/RCs/ctakes-3.2.0/ctakes-3.2.0/apache-ctakes-3.2.0-src.tar.gz
>> > /.zip
>> >
>> > The tag to be voted on:
>> > http://svn.apache.org/repos/asf/ctakes/tags/ctakes-3.2.0-rc1/
>> >
>> > The MD5 checksum of the tarball can be found at:
>> >
>> >
>> http://people.apache.org/~chenpei/RCs/ctakes-3.2.0/ctakes-3.2.0/apache-ctakes-3.2.0-src.tar.gz.md5
>> > /.zip.md5
>> >
>> > The signature of the tarball can be found at:
>> >
>> >
>> http://people.apache.org/~chenpei/RCs/ctakes-3.2.0/ctakes-3.2.0/apache-ctakes-3.2.0-src.tar.gz.asc
>> > /.zip.asc
>> >
>> > Apache cTAKES' KEYS file, containing the PGP keys used to sign the
>> release:
>> > https://dist.apache.org/repos/dist/release/ctakes/KEYS
>> >
>> > Please vote on releasing these packages as Apache cTAKES 3.2.0. The
>> vote is
>> > open for at least the next 72 hours.
>> > Only votes from the cTAKES PMC are binding, but folks are welcome to
>> check
>> > the release candidate and voice their approval or disapproval.
>> > The vote passes if at least three binding +1 votes are cast.
>> >
>> > [ ] +1 Release the packages as Apache cTAKES 3.2.0
>> > [ ] -1 Do not release the packages because...
>> >
>> > Also, the convenience binary can be found at:
>> >
>> >
>> http://people.apache.org/~chenpei/RCs/ctakes-3.2.0/ctakes-3.2.0/apache-ctakes-3.2.0-bin.tar.gz
>> > /.zip
>> > Note: It's tempoarily on people.a.o because the artifacts were too large
>> > for https://dist.apache.org/repos/dist/dev/ctakes (Working with infra
>> on
>> > increasing the limit).
>> >
>> >
>> > Thanks!
>> >
>>
>
>

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