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From vijay garla <vnga...@gmail.com>
Subject Re: cTAKES 3.2 Analysis Batch Issue
Date Tue, 08 Jul 2014 07:14:05 GMT
Hi Clayton,

The screenshot is not coming through via the newsgroup emails.  can you
attach the log file?

vj


On Mon, Jul 7, 2014 at 5:38 PM, Clayton Turner <caturner3@g.cofc.edu> wrote:

> Any update on this issue? I have this problem even if I don't use the ytex
> version of the aggregate text processor (UMLS-independent as well).
>
>
> On Thu, Jul 3, 2014 at 2:33 PM, Clayton Turner <caturner3@g.cofc.edu>
> wrote:
>
>> Yes, I am running the fracture_demo.xml cpe.
>>
>> There is no option for the analysis batch (that's the main issue). I also
>> get no response in my MySQL database (umls installed - not sure if that can
>> be related).
>>
>> Here's a screenshot of my CPE (using ytex):
>> [image: Inline image 1]
>>
>>
>>
>>
>> On Wed, Jul 2, 2014 at 10:48 PM, vijay garla <vngarla@gmail.com> wrote:
>>
>>> Hi clayton,
>>>
>>> I assume you are running the fracture_demo.xml cpe - is that correct?
>>>  The CPE GUI should give you the option to set the analysis batch. (see
>>> attached screenshot).  That being said, the analysis_batch is not required
>>> (it will default to the current date).  Can you attach the log file?
>>>
>>> -vj
>>>
>>> [image: Inline image 1]
>>>
>>>
>>> On Wed, Jul 2, 2014 at 12:22 PM, Clayton Turner <caturner3@g.cofc.edu>
>>> wrote:
>>>
>>>> Hi, I'm a relatively new user of cTAKES.
>>>>
>>>> I recently cloned cTAKES from the repository and I am using UMLS
>>>> installed
>>>> in my mysql database. I have recently noticed an issue, though. When
>>>> conducting the bone fracture demo, In the CPE, I use the
>>>> DBCollectionReader
>>>> and Analysis Engine from the ctakes-ytex-uima directory within my
>>>> CTAKES_HOME.
>>>>
>>>> I can get this to run successfully, but I am not able to specify an
>>>> "analysis batch" in the CPE. Because of this, my ytex database is not
>>>> being
>>>> updated with results of the CPE run (in the v_document tables). Any
>>>> ideas
>>>> why the analysis batch field is missing?
>>>>
>>>> Side question: Any update on when cTAKES 3.2 will be officially
>>>> released? I
>>>> see we're passed the expected release and was curious on how long it
>>>> will
>>>> be until it will officially come out.
>>>>
>>>> Thanks a lot,
>>>> --
>>>> Clayton Turner
>>>>
>>>
>>>
>>
>>
>> --
>> --
>> Clayton Turner
>> email: caturner3@g.cofc.edu
>> phone: (843)-424-3784
>> web: claytonturner.blogspot.com
>>
>> -------------------------------------------------------------------------------------------------
>> “When scientifically investigating the natural world, the only thing
>> worse than a blind believer is a seeing denier.”
>> - Neil deGrasse Tyson
>>
>
>
>
> --
> --
> Clayton Turner
> email: caturner3@g.cofc.edu
> phone: (843)-424-3784
> web: claytonturner.blogspot.com
>
> -------------------------------------------------------------------------------------------------
> “When scientifically investigating the natural world, the only thing worse
> than a blind believer is a seeing denier.”
> - Neil deGrasse Tyson
>

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