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From vijay garla <vnga...@gmail.com>
Subject Re: [VOTE] Release Apache cTAKES 3.2.0 (rc2)
Date Wed, 09 Jul 2014 15:37:05 GMT
Sorry, I meant the snomed dictionary lookup database - I think it is hsql,
not lucene.

-vj


On Wed, Jul 9, 2014 at 5:30 PM, Masanz, James J. <Masanz.James@mayo.edu>
wrote:

> I believe the only dictionaries shipped with Apache cTAKES in lucene
> indexes contain just the Orange Book,  RxNorm, and some made-up terms, not
> SNOMED-CT or the other sources taken from UMLS. If that is not correct,
> then I agree there is a problem with what is being shipped in lucene
> indexes.
>
> -- James
>
> -----Original Message-----
> From: vijay garla [mailto:vngarla@gmail.com]
> Sent: Wednesday, July 09, 2014 9:30 AM
> To: dev@ctakes.apache.org
> Subject: Re: [VOTE] Release Apache cTAKES 3.2.0 (rc2)
>
> ctakes-ytex-lib-3.1.2-SNAPSHOT.zip
> <https://ytex.googlecode.com/files/ctakes-ytex-lib-3.1.2-SNAPSHOT.zip> -
> this contains non-asf compliant ytex libs.  I would like to add it to the
> sourceforge site / or add it to the ctakes resources directly (that way
> users simply have to unzip a single zip file)
>
> ctakes-ytex-resources-3.1.2-SNAPSHOT.zip
> <
> http://www.ytex-nlp.org/umls.download/secure/3.1/ctakes-ytex-resources-3.1.2-SNAPSHOT.zip
> >
> -
> this contains data derived from the UMLS - concept graphs and dictionary
> lookup tables.  downloading this requires a UTS login.  It is conceptually
> no different from the ctakes resources, so I believe it would be OK to add
> it to that zip file, but I'm not a lawyer.
>
> On another note: I think forcing users to specify the UTS username/password
> and contacting NIH every time you run cTAKES is problematic, and doesn't
> prevent users who don't have a valid UTS login from viewing the data
> contained in the lucene index dictionary.  I personally believe requiring a
> UTS login to download would be the best way to make resources derived from
> the UMLS available to users (this is what I'm doing for ytex-resources).
>
> to summarize: for now, I would like to add the ytex libs to the ctakes
> resources zip.
>
> -vj
>
>
>
>
> On Wed, Jul 9, 2014 at 4:04 PM, Chen, Pei <Pei.Chen@childrens.harvard.edu>
> wrote:
>
> > The maven artifacts are also available in the staging area:
> > https://repository.apache.org/content/repositories/orgapachectakes-1001
> > VJ: Just curious- how did you envision ytex users downloading the
> > jars/war? From the distro bin.zip or from maven central?
> >
> > --Pei
> >
> > > -----Original Message-----
> > > From: Pei Chen [mailto:chenpei@apache.org]
> > > Sent: Tuesday, July 08, 2014 6:11 PM
> > > To: dev@ctakes.apache.org
> > > Subject: [VOTE] Release Apache cTAKES 3.2.0 (rc2)
> > >
> > > Hi all,
> > >
> > > The main difference between rc1 and rc2 is that we removed the lvg-res
> > and
> > > assertion-res.jar from the distro.  They still need to be unpacked.
> > >
> > > This is a call for a vote on releasing the following candidate (rc2) as
> > Apache
> > > cTAKES 3.2.0.
> > > The major changes include:
> > > - New optional YTEX component(s) (Yale Extensions to cTAKES)
> > > - New optional improved/faster dictionary lookup
> (dictionary-lookup-fast)
> > > - New optional Temporal component (Time + Event extraction.  Relations
> > will
> > > be including in a future release.)
> > > - Other bug fixes/enhancements from Jira
> > >
> > > [TODO: Online documentation still needs to be updated on wiki]
> > >
> > > For more detailed information on the changes/release notes, please
> visit:
> > >
> >
> https://issues.apache.org/jira/secure/ReleaseNote.jspa?projectId=12313621
> > > &version=12324066
> > >
> > > The release was made using the cTAKES release process documented here:
> > > http://ctakes.apache.org/ctakes-release-guide.html
> > >
> > > The candidate is available at:
> > > http://people.apache.org/~chenpei/RCs/ctakes-3.2.0-rc2/apache-ctakes-
> > > 3.2.0-src.tar.gz
> > > /.zip
> > >
> > > The tag to be voted on:
> > > http://svn.apache.org/repos/asf/ctakes/tags/ctakes-3.2.0-rc2
> > >
> > > The MD5 checksum of the tarball can be found at:
> > > http://people.apache.org/~chenpei/RCs/ctakes-3.2.0-rc2/apache-ctakes-
> > > 3.2.0-src.tar.gz.md5
> > > /.zip.md5
> > >
> > > The signature of the tarball can be found at:
> > > http://people.apache.org/~chenpei/RCs/ctakes-3.2.0-rc2/apache-ctakes-
> > > 3.2.0-src.tar.gz.asc
> > > /.zip.asc
> > >
> > > Apache cTAKES' KEYS file, containing the PGP keys used to sign the
> > release:
> > > https://dist.apache.org/repos/dist/release/ctakes/KEYS
> > >
> > > Please vote on releasing these packages as Apache cTAKES 3.2.0. The
> vote
> > is
> > > open for at least the next 72 hours.
> > > Only votes from the cTAKES PMC are binding, but folks are welcome to
> > check
> > > the release candidate and voice their approval or disapproval.
> > > The vote passes if at least three binding +1 votes are cast.
> > >
> > > [ ] +1 Release the packages as Apache cTAKES 3.2.0 [ ] -1 Do not
> release
> > the
> > > packages because...
> > >
> > > Also, the convenience binary can be found at:
> > > http://people.apache.org/~chenpei/RCs/ctakes-3.2.0-rc2/apache-ctakes-
> > > 3.2.0-bin.tar.gz
> > > /.zip
> > >
> > > Note: It's temporarily on people.a.o because the artifacts were too
> > large for
> > > https://dist.apache.org/repos/dist/dev/ctakes (Working with infra on
> > > increasing the limit).
> > >
> > >
> > > Thanks!
> >
>

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