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From John Green <john.travis.gr...@gmail.com>
Subject Re: ytex DBconsumer and groovy parser
Date Tue, 15 Jul 2014 00:12:29 GMT
Thanks James, that was a forehead slapper - I was looking in a partial
build (the ytex download).

JG


On Tue, Jul 1, 2014 at 10:01 PM, Masanz, James J. <Masanz.James@mayo.edu>
wrote:

> Hi John,
>
> Not positive this is the line you are referring to, but there is a line in
> cTAKES_clinical_pipeline.groovy (which is not in sandbox, btw) that has a
> comment about
>
> "createAnalysisEngineDescription  expects name to not end in .xml even
> though filename actually does"
>
> I am guessing the comment you see is trying to say the same thing.
>
> cTAKES_clinical_pipeline.groovy is in  ctakes-core/scripts/groovy
>
> In that script, line 321 is where the writer is specified. There is no
> separately defined "consumer" in the same sense that the CPE GUI has
> consumers that are separate from annotators. The script just uses the last
> "annotator"  as a consumer and convention is AFAIK to call them writers in
> this case.
>
> Hope that helps,
> -- James
>
> -----Original Message-----
> From: John Green [mailto:john.travis.green@gmail.com]
> Sent: Tuesday, July 01, 2014 7:15 PM
> To: dev@ctakes.apache.org
> Subject: ytex DBconsumer and groovy parser
>
> If someone has a free minute, which, judging from my own life is probably
> not the case - where in the groovy scrips in sandbox do you define the
> consumer to use? There is one comment that says "dont put the .xml here"
> then there is a path to the dictionary ae. Im working by ssh from the
> hospital a lot in my "free time" in the ICU and running gui CPEs isn't
> gonna cut it.
>
> Apropos the ytex dbconsumer - I should be able to just tack this on to the
> end of the ytex aggregate pipeline?
>
> I'm probably still asking very naive questions but to date I still haven't
> had the time to dive into UIMA's base very well, so I apologize.
>
> My goal is to run the full ytex pipeline from the command line with the
> ytex dbconsumer ...
>
> Thanks for everyone's patience,
> John
>

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