Return-Path: X-Original-To: apmail-ctakes-dev-archive@www.apache.org Delivered-To: apmail-ctakes-dev-archive@www.apache.org Received: from mail.apache.org (hermes.apache.org [140.211.11.3]) by minotaur.apache.org (Postfix) with SMTP id 12A6711197 for ; Fri, 27 Jun 2014 15:11:23 +0000 (UTC) Received: (qmail 93795 invoked by uid 500); 27 Jun 2014 15:11:17 -0000 Delivered-To: apmail-ctakes-dev-archive@ctakes.apache.org Received: (qmail 93743 invoked by uid 500); 27 Jun 2014 15:11:17 -0000 Mailing-List: contact dev-help@ctakes.apache.org; run by ezmlm Precedence: bulk List-Help: List-Unsubscribe: List-Post: List-Id: Reply-To: dev@ctakes.apache.org Delivered-To: mailing list dev@ctakes.apache.org Received: (qmail 93418 invoked by uid 99); 27 Jun 2014 15:11:16 -0000 Received: from athena.apache.org (HELO athena.apache.org) (140.211.11.136) by apache.org (qpsmtpd/0.29) with ESMTP; Fri, 27 Jun 2014 15:11:16 +0000 X-ASF-Spam-Status: No, hits=-0.0 required=5.0 tests=SPF_PASS X-Spam-Check-By: apache.org Received-SPF: error (athena.apache.org: local policy) Received: from [134.174.13.91] (HELO mailsmtp1.childrenshospital.org) (134.174.13.91) by apache.org (qpsmtpd/0.29) with ESMTP; Fri, 27 Jun 2014 15:11:12 +0000 Received: from pps.filterd (mailsmtp1.childrenshospital.org [127.0.0.1]) by mailsmtp1.childrenshospital.org (8.14.7/8.14.7) with SMTP id s5RF5qU8025193; Fri, 27 Jun 2014 11:10:28 -0400 Received: from smtpndc2.chboston.org (smtpndc2.chboston.org [10.20.50.105]) by mailsmtp1.childrenshospital.org with ESMTP id 1mqfqps2jx-1 (version=TLSv1/SSLv3 cipher=DHE-RSA-AES256-SHA bits=256 verify=NOT); Fri, 27 Jun 2014 11:10:28 -0400 Received: from pps.filterd (smtpndc2.chboston.org [127.0.0.1]) by smtpndc2.chboston.org (8.14.5/8.14.5) with SMTP id s5RF5si3013089; Fri, 27 Jun 2014 11:10:28 -0400 Received: from chexhubcas2.chboston.org (internal-ndc-nat-v1260.tch.harvard.edu [10.20.50.4]) by smtpndc2.chboston.org with ESMTP id 1meghtfes5-1 (version=TLSv1/SSLv3 cipher=AES128-SHA bits=128 verify=NOT); Fri, 27 Jun 2014 11:10:28 -0400 Received: from CHEXMBX1A.CHBOSTON.ORG ([fe80::3c05:8ca9:55a6:f320]) by CHEXHUBCAS2.CHBOSTON.ORG ([fe80::c21:dbf:ff97:edca%21]) with mapi id 14.03.0169.001; Fri, 27 Jun 2014 11:10:27 -0400 From: "Chen, Pei" To: "Hochheiser, Harry Stewart" , "dev@ctakes.apache.org" Subject: RE: DeepPheno: guidance on CTakes Thread-Topic: DeepPheno: guidance on CTakes Thread-Index: Ac+RhejxNl/Zv+imSdeWYjHGwDrYZAAk1afQ Date: Fri, 27 Jun 2014 15:10:27 +0000 Message-ID: <924DE05C19409B438EB81DE683A942D9108421B4@CHEXMBX1A.CHBOSTON.ORG> References: In-Reply-To: Accept-Language: en-US Content-Language: en-US X-MS-Has-Attach: X-MS-TNEF-Correlator: x-originating-ip: [10.7.2.182] Content-Type: text/plain; charset="us-ascii" Content-Transfer-Encoding: quoted-printable MIME-Version: 1.0 X-Proofpoint-Virus-Version: vendor=fsecure engine=2.50.10432:5.12.52,1.0.14,0.0.0000 definitions=2014-06-27_05:2014-06-27,2014-06-27,1970-01-01 signatures=0 X-Proofpoint-Virus-Version: vendor=fsecure engine=2.50.10432:5.12.52,1.0.14,0.0.0000 definitions=2014-06-27_05:2014-06-27,2014-06-27,1970-01-01 signatures=0 X-Proofpoint-Spam-Details: rule=notspam policy=default score=0 spamscore=0 suspectscore=0 phishscore=0 adultscore=0 bulkscore=0 classifier=spam adjust=0 reason=mlx scancount=1 engine=7.0.1-1402240000 definitions=main-1406270159 X-Virus-Checked: Checked by ClamAV on apache.org +dev Harry, I've just checked in some two example java classes [1] that should make lif= e a lot easier for developers to create and add new cTAKES Annotators. It will shield users initially from all of the complexities of UIMA, XML De= scriptors, cTAKES, etc. Just check out the latest:=20 svn co http://svn.apache.org/repos/asf/ctakes/trunk mvn clean compile --Pei [1] http://svn.apache.org/repos/asf/ctakes/trunk/ctakes-examples/src/main/j= ava/org/apache/ctakes/examples/ > -----Original Message----- > From: Hochheiser, Harry Stewart [mailto:harryh@pitt.edu] > Sent: Thursday, June 26, 2014 5:31 PM > To: Chen, Pei > Subject: DeepPheno: guidance on CTakes >=20 > Pei: >=20 > As I'm now digging into cTAKES as part of our DeepPheno project (and some > other related efforts), I'm hoping you can help with a quick question. Is= there > any guide/documentation on the process for adding new annotators to > cTAKES? I've dug into the apache site and mailing list archives, but hav= en't > had much luck. >=20 > Thanks! >=20 > -harry >=20 > ---- > Harry Hochheiser > University of Pittsburgh > Department of Biomedical Informatics > harryh@pitt.edu 412 648 9300 >=20 >=20 >=20