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From "Chen, Pei" <Pei.C...@childrens.harvard.edu>
Subject Re: UMLS Env variables suggestion
Date Sat, 04 Jan 2014 21:07:37 GMT
I believe Sean updated the code to also support underscore (_) as well. But the docs just need
to be updated...


> On Jan 4, 2014, at 4:04 PM, "Dewful" <dewful@gmail.com> wrote:
> 
> In the documentation, in the .sh files to run ctakes;
> 
> # If you plan to use the UMLS Resources, set/export env variables
> # export ctakes.umlsuser=[username], ctakes.umlspw=[password]
> 
> however, simply trying to
> 
> export ctakes.umlsuser=myusername, ctakes.umlspw=mypassword
> 
> doesnt work because bash3 doesnt allow dots in the keyname and will throw
> an error
> 
> bin/runctakesCVD.sh: line 42: export: `ctakes.umlsuser=username,': not a
> valid identifier
> 
> http://stackoverflow.com/questions/15016403/how-to-export-dot-separated-environment-variablesexplains
> some solutions
> 
> it may be helpful to show how the user can set these easily if they want to
> set the env variables this way, possibly using one of the suggestions in SO.
> 
> N

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