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From "Chen, Pei" <Pei.C...@childrens.harvard.edu>
Subject RE: cTAKES DATA DICTIONARY
Date Wed, 02 Oct 2013 15:51:06 GMT
Try Refreshing now. (Tried with Chrome, Safari, IE..)
I also had to set the mime:type on the svn repo for the xsl file as well.
https://svn.apache.org/repos/asf/ctakes/trunk/ctakes-type-system/src/main/resources/org/apache/ctakes/typesystem/types/TypeSystem.xml


> -----Original Message-----
> From: Dmitriy Dligach [mailto:dmitriy.dligach@childrens.harvard.edu]
> Sent: Wednesday, October 02, 2013 11:32 AM
> To: dev@ctakes.apache.org
> Subject: Re: cTAKES DATA DICTIONARY
> 
> The link works for me in Chrome but not in Firefox. In Firefox I get:
> 
> Error loading stylesheet: An XSLT stylesheet does not have an XML
> mimetype:https://svn.apache.org/repos/asf/ctakes/trunk/ctakes-type-
> system/src/main/resources/org/apache/ctakes/typesystem/types/TypeSyst
> emDescription.xsl
> 
> 
> On 10/02/2013 11:11 AM, Tim Miller wrote:
> > FWIW I got it to work on the ipad but still doesn't work on firefox
> > even if I clear my history first. Anyone else can confirm on firefox
> > whether it's something on my end or on the server end?
> >
> > Looks nice on the ipad!
> > Tim
> >
> > On 10/02/2013 11:05 AM, Chen, Pei wrote:
> >> Try refreshing now.
> >> https://svn.apache.org/repos/asf/ctakes/trunk/ctakes-type-
> system/src/main/resources/org/apache/ctakes/typesystem/types/TypeSyst
> em.xml
> >>
> >> Not sure what happened, but the <?xml-stylesheet type="text/xsl"
> >> href="TypeSystemDescription.xsl"?> change seem to be lost/clobbered,
> >> so I just readded it...
> >> --Pei
> >>
> >>> -----Original Message-----
> >>> From: Tim Miller [mailto:timothy.miller@childrens.harvard.edu]
> >>> Sent: Wednesday, October 02, 2013 11:00 AM
> >>> To: dev@ctakes.apache.org
> >>> Subject: Re: cTAKES DATA DICTIONARY
> >>>
> >>> I still get an error from this link.
> >>> Firefox says:
> >>>
> >>>      Error loading stylesheet: An XSLT stylesheet does not have an XML
> >>>      mimetype:
> >>> https://svn.apache.org/repos/asf/ctakes/trunk/ctakes-type-
> >>>
> system/src/main/resources/org/apache/ctakes/typesystem/types/TypeSyst
> >>> emDescription.xsl
> >>>
> >>>
> >>> Chrome displays the xml with this message:
> >>>
> >>>      This XML file does not appear to have any style information
> >>>      associated with it. The document tree is shown below.
> >>>
> >>>
> >>>
> >>>
> >>> This is under ubuntu.
> >>> Tim
> >>>
> >>> On 09/30/2013 04:57 PM, Chen, Pei wrote:
> >>>> It's fixed:
> >>>> https://svn.apache.org/repos/asf/ctakes/trunk/ctakes-type-
> system/src/m
> >>>> ain/resources/org/apache/ctakes/typesystem/types/TypeSystem.xml
> >>>> Thanks to infra- I just had to set the mime:types in svn...
> >>>> Now we just need to beef up the docs a bit :)
> >>>>
> >>>>
> >>>>> -----Original Message-----
> >>>>> From: Masanz, James J. [mailto:Masanz.James@mayo.edu]
> >>>>> Sent: Monday, September 30, 2013 4:57 PM
> >>>>> To: 'dev@ctakes.apache.org'
> >>>>> Subject: RE: cTAKES DATA DICTIONARY
> >>>>>
> >>>>> I think it's a bad idea to have a copy on the website.
> >>>>> Too easy to get out of sync with SVN.
> >>>>>
> >>>>> I can view the copy in SVN OK with IE 8, but not with Chrome (only
2
> >>>>> browsers I've tried).
> >>>>>
> >>>>>
> >>>>> -----Original Message-----
> >>>>> From: dev-return-2058-Masanz.James=mayo.edu@ctakes.apache.org
> >>>>> [mailto:dev-return-2058-
> Masanz.James=mayo.edu@ctakes.apache.org]
> >>> On
> >>>>> Behalf Of Chen, Pei
> >>>>> Sent: Monday, September 30, 2013 3:44 PM
> >>>>> To: dev@ctakes.apache.org
> >>>>> Subject: RE: cTAKES DATA DICTIONARY
> >>>>>
> >>>>> http://ctakes.apache.org/docs/TypeSystem.xml
> >>>>>
> >>>>> It's kind of weird that the xls works behind the apache site/web
> >>>>> servers, but not within the svn repo.  Does it ring a bell to anyone?
> >>>>> I have a feeling that the svn web servers are doing something weird
> >>>>> and not allowing the transformation.
> >>>>> But either way, I've made a copy of it on to the site;  I think
the
> >>>>> descriptions need to be beefed up a little bit though...
> >>>>>
> >>>>> Any objections in removing the "Equivalent to edu.mayo.bmi. etc.
> >>>>> etc."  It probably made sense in the past when we were upgrading
to
> >>>>> the common type system, but I think it probably makes more sense
to
> >>>>> put the intended meanings there now...
> >>>>>
> >>>>> --Pei
> >>>>>
> >>>>>> -----Original Message-----
> >>>>>> From: Richard Eckart de Castilho [mailto:rec@apache.org]
> >>>>>> Sent: Monday, September 30, 2013 12:08 PM
> >>>>>> To: dev@ctakes.apache.org
> >>>>>> Subject: Re: cTAKES DATA DICTIONARY
> >>>>>>
> >>>>>> Sounds cool, unfortunately as it is, it doesn't seem to work
in
> >>>>>> Safari, Firefox, or Chrome :( (OS X)
> >>>>>>
> >>>>>> -- Richard
> >>>>>>
> >>>>>> On 30.09.2013, at 18:01, "Chen, Pei"
> >>>>>> <Pei.Chen@childrens.harvard.edu>
> >>>>>> wrote:
> >>>>>>
> >>>>>>> Thanks Murali!
> >>>>>>> It's actually pretty cool to have a quick reference to lookup
what
> >>>>>>> all the
> >>>>>> different fields mean.
> >>>>>>> FYI: I've made the commits to:
> >>>>>>> http://svn.apache.org/repos/asf/ctakes/trunk/ctakes-type-
> system/src
> >>>>>>> / ma
> >>> in/resources/org/apache/ctakes/typesystem/types/TypeSystem.xml
> >>>>>>> which references the XSL template[1].
> >>>>>>> The xslt looks okay from IE.
> >>>>>>>
> >>>>>>> Troy, do you know if Confluence has an XSLT plugin rather
than
> >>>>>>> relying on
> >>>>>> individual browsers?  It would be nice to just pull the descriptions
> >>>>>> of the fields directly from the TypeSystem descriptions so it
can be
> >>>>>> maintained in 1 place...
> >>>>>>> [1]
> >>>>>>> http://svn.apache.org/repos/asf/ctakes/trunk/ctakes-type-
> system/src
> >>>>>>> /
> >>>>>>> ma
> >>>>>>>
> >>>
> in/resources/org/apache/ctakes/typesystem/types/TypeSystemDescription.
> >>>>>>> xsl
> >>>>>>> --Pei
> >>>>>>>
> >>>>>>>> -----Original Message-----
> >>>>>>>> From: Chen, Pei [mailto:Pei.Chen@childrens.harvard.edu]
> >>>>>>>> Sent: Saturday, September 28, 2013 2:15 PM
> >>>>>>>> To: <dev@ctakes.apache.org>
> >>>>>>>> Cc: dev@ctakes.apache.org
> >>>>>>>> Subject: Re: cTAKES DATA DICTIONARY
> >>>>>>>>
> >>>>>>>> +1
> >>>>>>>> That sounds like a good idea...
> >>>>>>>> If you like, feel free to creat a Jira item for this
and attach
> >>>>>>>> any code/patches to it:
> >>>>>>>>
> >>>>>>>> https://issues.apache.org/jira/browse/ctakes
> >>>>>>>> I believe any should be able to create an account.
> >>>>>>>>
> >>>>>>>> Also, if you subscribe to the list, it doesn't require
moderator
> >>> approval...
> >>>>>>>> Sent from my iPad
> >>>>>>>>
> >>>>>>>> On Sep 28, 2013, at 12:42 PM, "Murali Nagendranath"
> >>>>>>>> <mminnah@gmail.com<mailto:mminnah@gmail.com>>
wrote:
> >>>>>>>>
> >>>>>>>> Hi folks,
> >>>>>>>>
> >>>>>>>> One thing I think would be really helpful for new users
would be
> >>>>>>>> to have a data dictionary that describes the definition
of each
> >>>>>>>> Type and
> >>>>>> Fields.
> >>>>>>>> This could be a simple html table that we could link
to.
> >>>>>>>>
> >>>>>>>> Since there is already a TypeSystem.xml that contains
the
> features
> >>>>>>>> and descriptions, I was thinking we could create an
easy xslt>html
> >>>>>>>> template and have things maintained in one place.
> >>>>>>>>
> >>>>>>>> If people think this is a good idea, I can try to take
a first
> >>>>>>>> stab at it.
> >>>>>>>>
> >>>>>>>> --Murali
> >
> 
> --
> Dmitriy Dligach, PhD
> Research Fellow
> Children's Hospital Informatics Program
> Boston Children's Hospital and Harvard Medical School
> (617) 919-3596


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