Return-Path: X-Original-To: apmail-ctakes-dev-archive@www.apache.org Delivered-To: apmail-ctakes-dev-archive@www.apache.org Received: from mail.apache.org (hermes.apache.org [140.211.11.3]) by minotaur.apache.org (Postfix) with SMTP id 5DF8B10933 for ; Thu, 29 Aug 2013 22:07:38 +0000 (UTC) Received: (qmail 2097 invoked by uid 500); 29 Aug 2013 22:07:38 -0000 Delivered-To: apmail-ctakes-dev-archive@ctakes.apache.org Received: (qmail 2069 invoked by uid 500); 29 Aug 2013 22:07:38 -0000 Mailing-List: contact dev-help@ctakes.apache.org; run by ezmlm Precedence: bulk List-Help: List-Unsubscribe: List-Post: List-Id: Reply-To: dev@ctakes.apache.org Delivered-To: mailing list dev@ctakes.apache.org Received: (qmail 2061 invoked by uid 99); 29 Aug 2013 22:07:38 -0000 Received: from athena.apache.org (HELO athena.apache.org) (140.211.11.136) by apache.org (qpsmtpd/0.29) with ESMTP; Thu, 29 Aug 2013 22:07:38 +0000 X-ASF-Spam-Status: No, hits=2.2 required=5.0 tests=HTML_MESSAGE,SPF_PASS X-Spam-Check-By: apache.org Received-SPF: pass (athena.apache.org: local policy) Received: from [129.105.238.117] (HELO chcspcip1.ads.northwestern.edu) (129.105.238.117) by apache.org (qpsmtpd/0.29) with ESMTP; Thu, 29 Aug 2013 22:07:32 +0000 Received: from chcspsym1.ads.northwestern.edu ([129.105.238.69]) by chcspcip1.ads.northwestern.edu with ESMTP/TLS/DHE-RSA-AES256-SHA; 29 Aug 2013 17:07:11 -0500 X-AuditID: 8169ee45-b7f716d000004912-58-521fc60e1f45 Received: from CHCSPCAS1.ads.northwestern.edu (chcspcas1.ads.northwestern.edu [129.105.68.197]) (using TLS with cipher AES128-SHA (128/128 bits)) (Client did not present a certificate) by chcspsym1.ads.northwestern.edu (Symantec Messaging Gateway) with SMTP id 36.1F.18706.E06CF125; Thu, 29 Aug 2013 17:07:11 -0500 (CDT) Received: from CHCSPMBX2.ads.northwestern.edu ([169.254.6.219]) by CHCSPCAS1.ads.northwestern.edu ([129.105.68.197]) with mapi id 14.02.0347.000; Thu, 29 Aug 2013 17:07:10 -0500 From: William Karl Thompson To: "dev@ctakes.apache.org" Subject: resources for training modules Thread-Topic: resources for training modules Thread-Index: Ac6lA1wsko0aNXhyQ7yrzIj+rfTHFg== Date: Thu, 29 Aug 2013 22:07:09 +0000 Message-ID: <369219E7204FD34CA27889B1C654961C26E4A975@chcspmbx2.ads.northwestern.edu> Accept-Language: en-US Content-Language: en-US X-MS-Has-Attach: X-MS-TNEF-Correlator: x-originating-ip: [129.105.238.73] Content-Type: multipart/alternative; boundary="_000_369219E7204FD34CA27889B1C654961C26E4A975chcspmbx2adsnor_" MIME-Version: 1.0 X-Brightmail-Tracker: H4sIAAAAAAAAA61Ua1BUZRieb3dZDsiHh4PAywoLnBnGphbitiMZOP6wgf4YbqXWn+24nNiV dXdnzy63LrPgD5IgBI2QDEgRlfDWaFLRqKtAIiYUmRFDFxkKbGxsU7Fs6Xx7wUP97c/Os8/z fu/zve9zzqHkjHuZijJZHLzdwplZZbii2rR+IG35YJIu435jWO54e8E6VPhna4+iCL2oybNb nQ4+2WgVHPmsyW612Kx2R7pF/DGW8wLpkc4XO9dkadnH176kMf5wYVxpa0yqGDw6GepCO1fW oTAK6BwY/L5G5sexMDp1XFmHwimGHpSB67tOmf/PaQQffLNPTqqUdBZc2zmJCF5BZ0PzgdYQ gqPpVXDnzS65n9fA9bH3AjgdXL2jCoIVdCosHLzsw5h+Hn7+0uvDSHS+N9zru4WcjoOJ6Y7A jWjo6r8q9+MYmL3hDfFjFo4enwjx11thqLYm0DMKLu2dVuxCTJukVZukrE1S5uc10Pnp70o/ fgy6378pD+KRczdkUr4ThfYgtcFoEGxC5fbMdK5Y+M+2P0S+0G491Yemm9PciKYQG4GLPkrS MSFcmXjMjUopGRuDMy+KVORWa3GlkROMervTzAvsCpwxINJ4kd7qNJeyKnyeFEcvsha+XDDz DtGTVeMjhQk6Jm5RE5yCzWQwWZ2C3mk3uxFQcrGtnlwAF3OVVbzd6jdzoyoxkCa5KsZgFR84 i0Ofma1dnZ2dqdXm5GRo/xeajcMnB9Q6hi7hHHwpz9t4e9C8nKJYwKFk3Cg7X8JXvGwyO4Ky eK6MjExLFd8uErH1gtgwVipI1pGCezsSdYxKKv97IzIqzI1KqAhxLYxv24KN2y6YSgLW0Xgj sY4Isj7beFxDSpkgKbFMxHdIArFBaandMKpUxeFIcpgmFUanZXFKVSy+dFscZrlEIG6qBDxC +BgJ/9BQlYxZSmwXL1GXega/G3OoTiY+ftHY6xtI/Kw8nJLBmwm5LED6hgS8hXBRAU4yYwJe IDPGBJSldlldSHyDP1FA/0gpeOobQqH52FwYeOdrwuEX71fL4Q33tWi4/vHMStj99m9qGL/b mApNP02nwlvdOx6B1gP3NDB1qyMHxq/OroG+0fo8OHF6Jg8mPRfXw2TtTAHsP+h5Gm43Xd4A 7f1fPAPu+bEi8DRUb4Q9be8+B/fHzm6G1r88epg722KAher9JeDt+3sbHD651wJTw59bxOKv bXNi5jIx811WNcncwTmkmRd0JpLMA2wg80JCMkFySebPEik2KC1diMqFXj3WlNxtUxnylasj LbXdHNt2jn3BvKmlYt7lVJeFHNb3xfc3cNpNuQupaV25++pfs62DK4c0rfUP/th2M0mnp381 hZ5vd/U+SBk25K/tMXpcZ4aGak+9giOnntx9N+XK7I4JtfLbLe880XKq9zPnnlWaM0c8Va/3 nzik5X5MKarewCoEI5f5qNwucP8AAILw8FUGAAA= X-Virus-Checked: Checked by ClamAV on apache.org --_000_369219E7204FD34CA27889B1C654961C26E4A975chcspmbx2adsnor_ Content-Type: text/plain; charset="us-ascii" Content-Transfer-Encoding: quoted-printable Hello all, I'm interested in training the relation extractor on some annotated notes f= rom Northwestern clinical data, and I understand that cleartk is currently = being used for this purpose in the cTAKES project. Could someone provide s= ome pointers on how to go about using cleartk to train models that can then= be invoked by a cTAKES module? Again, my focus for now is on the relation = extractor. In case it's relevant, I'm intending to use the brat rapid annot= ation tool (http://brat.nlplab.org/) to generate a gold standard corpus. Cheers, Will --_000_369219E7204FD34CA27889B1C654961C26E4A975chcspmbx2adsnor_--