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From "Chen, Pei" <Pei.C...@childrens.harvard.edu>
Subject RE: ctakes-examples project?
Date Thu, 22 Aug 2013 19:28:24 GMT
Are we planning to use the Anafora Annotation Tool [1] and format for this?

[1] https://verbs.colorado.edu/~wech5560/anaforaDemo (DEMO)
--Pei

> -----Original Message-----
> From: John Green [mailto:john.travis.green@gmail.com]
> Sent: Thursday, August 22, 2013 6:52 AM
> To: dev@ctakes.apache.org
> Subject: Re: ctakes-examples project?
> 
> @Guergana: Glad to be getting involved in the project ma'am!
> 
> JG
> 
> 
> On Wed, Aug 21, 2013 at 12:59 PM, Savova, Guergana <
> Guergana.Savova@childrens.harvard.edu> wrote:
> 
> > We will look at the metadata info. Some of it is critical for the
> > annotations (e.g. docTime).
> > Thank you, John.
> > --Guergana
> >
> > -----Original Message-----
> > From: John Green [mailto:john.travis.green@gmail.com]
> > Sent: Wednesday, August 21, 2013 12:56 PM
> > To: dev@ctakes.apache.org
> > Subject: Re: ctakes-examples project?
> >
> > So far I have about 15 notes done. Im submitting them slow as, after I
> > said they were done I decided one last review of each for gross errors
> > and completeness would be in order. Im slowly working through the
> > proof read of each now. Just FYI if anyone was wondering.
> >
> > I don't know what the coders can do with the metadata I included at
> > the top of each note. I thought it would be useful, however, to
> > attempt to describe the data with these additional metrics. Maybe they
> > are already included vectors in the gold-standard annotation.
> >
> > JG
> >
> >
> > On Wed, Aug 21, 2013 at 12:00 PM, Pei Chen <chenpei@apache.org>
> wrote:
> >
> > > John is creating example clinical notes [1]...  and I believe
> > > Guergana's group and co. will create gold standard annotations for
> > > them (as training examples)?
> > >
> > > Where would be a good home for something like this?
> > >
> > > What do folks think about creating a separate project called
> > > ctakes-examples?  An alternative might be to put it in one of the
> > > test projects?
> > > [1] https://issues.apache.org/jira/browse/CTAKES-223
> > >
> > > --Pei
> > >
> >

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