Return-Path: X-Original-To: archive-asf-public-internal@cust-asf2.ponee.io Delivered-To: archive-asf-public-internal@cust-asf2.ponee.io Received: from cust-asf.ponee.io (cust-asf.ponee.io [163.172.22.183]) by cust-asf2.ponee.io (Postfix) with ESMTP id 96D6E2009A8 for ; Tue, 17 May 2016 15:55:34 +0200 (CEST) Received: by cust-asf.ponee.io (Postfix) id 957D11609F5; Tue, 17 May 2016 13:55:34 +0000 (UTC) Delivered-To: archive-asf-public@cust-asf.ponee.io Received: from mail.apache.org (hermes.apache.org [140.211.11.3]) by cust-asf.ponee.io (Postfix) with SMTP id DDBAA1607A8 for ; Tue, 17 May 2016 15:55:33 +0200 (CEST) Received: (qmail 51458 invoked by uid 500); 17 May 2016 13:55:33 -0000 Mailing-List: contact commits-help@ctakes.apache.org; run by ezmlm Precedence: bulk List-Help: List-Unsubscribe: List-Post: List-Id: Reply-To: dev@ctakes.apache.org Delivered-To: mailing list commits@ctakes.apache.org Received: (qmail 51449 invoked by uid 99); 17 May 2016 13:55:33 -0000 Received: from pnap-us-west-generic-nat.apache.org (HELO spamd3-us-west.apache.org) (209.188.14.142) by apache.org (qpsmtpd/0.29) with ESMTP; Tue, 17 May 2016 13:55:33 +0000 Received: from localhost (localhost [127.0.0.1]) by spamd3-us-west.apache.org (ASF Mail Server at spamd3-us-west.apache.org) with ESMTP id A1367180485 for ; Tue, 17 May 2016 13:55:32 +0000 (UTC) X-Virus-Scanned: Debian amavisd-new at spamd3-us-west.apache.org X-Spam-Flag: NO X-Spam-Score: 0.999 X-Spam-Level: X-Spam-Status: No, score=0.999 tagged_above=-999 required=6.31 tests=[KAM_LAZY_DOMAIN_SECURITY=1, RP_MATCHES_RCVD=-0.001] autolearn=disabled Received: from mx2-lw-us.apache.org ([10.40.0.8]) by localhost (spamd3-us-west.apache.org [10.40.0.10]) (amavisd-new, port 10024) with ESMTP id PNKIKONcmEDz for ; Tue, 17 May 2016 13:55:32 +0000 (UTC) Received: from mailrelay1-us-west.apache.org (mailrelay1-us-west.apache.org [209.188.14.139]) by mx2-lw-us.apache.org (ASF Mail Server at mx2-lw-us.apache.org) with ESMTP id BA7AD60DB3 for ; Tue, 17 May 2016 13:55:31 +0000 (UTC) Received: from svn01-us-west.apache.org (svn.apache.org [10.41.0.6]) by mailrelay1-us-west.apache.org (ASF Mail Server at mailrelay1-us-west.apache.org) with ESMTP id 11CC9E0057 for ; Tue, 17 May 2016 13:55:31 +0000 (UTC) Received: from svn01-us-west.apache.org (localhost [127.0.0.1]) by svn01-us-west.apache.org (ASF Mail Server at svn01-us-west.apache.org) with ESMTP id 0C5833A006A for ; Tue, 17 May 2016 13:55:31 +0000 (UTC) Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit Subject: svn commit: r1744266 - /ctakes/trunk/ctakes-temporal/src/main/java/org/apache/ctakes/temporal/eval/EvaluationOfBothEEAndETRelations.java Date: Tue, 17 May 2016 13:55:31 -0000 To: commits@ctakes.apache.org From: tmill@apache.org X-Mailer: svnmailer-1.0.9 Message-Id: <20160517135531.0C5833A006A@svn01-us-west.apache.org> archived-at: Tue, 17 May 2016 13:55:34 -0000 Author: tmill Date: Tue May 17 13:55:30 2016 New Revision: 1744266 URL: http://svn.apache.org/viewvc?rev=1744266&view=rev Log: Updated deprecated uimafit method call. Modified: ctakes/trunk/ctakes-temporal/src/main/java/org/apache/ctakes/temporal/eval/EvaluationOfBothEEAndETRelations.java Modified: ctakes/trunk/ctakes-temporal/src/main/java/org/apache/ctakes/temporal/eval/EvaluationOfBothEEAndETRelations.java URL: http://svn.apache.org/viewvc/ctakes/trunk/ctakes-temporal/src/main/java/org/apache/ctakes/temporal/eval/EvaluationOfBothEEAndETRelations.java?rev=1744266&r1=1744265&r2=1744266&view=diff ============================================================================== --- ctakes/trunk/ctakes-temporal/src/main/java/org/apache/ctakes/temporal/eval/EvaluationOfBothEEAndETRelations.java (original) +++ ctakes/trunk/ctakes-temporal/src/main/java/org/apache/ctakes/temporal/eval/EvaluationOfBothEEAndETRelations.java Tue May 17 13:55:30 2016 @@ -190,6 +190,7 @@ EvaluationOfTemporalRelations_ImplBase{ // evaluation.prepareXMIsFor(patientSets); if(options.getI2B2Output()!=null) evaluation.setI2B2Output(options.getI2B2Output() + "/temporal-relations/both"); if(options.getAnaforaOutput()!=null) evaluation.anaforaOutput = options.getAnaforaOutput(); + List training = trainItems; List testing = null; if(options.getTest()){ @@ -316,7 +317,7 @@ EvaluationOfTemporalRelations_ImplBase{ aggregateBuilder.add(AnalysisEngineFactory.createEngineDescription(RemoveNonContainsRelations.class)); // aggregateBuilder.add(AnalysisEngineFactory.createPrimitiveDescription(AddFlippedOverlap.class));//add flipped overlap instances to training data - aggregateBuilder.add(AnalysisEngineFactory.createPrimitiveDescription(RemoveNonTLINKRelations.class));//remove non tlink relations, such as alinks + aggregateBuilder.add(AnalysisEngineFactory.createEngineDescription(RemoveNonTLINKRelations.class));//remove non tlink relations, such as alinks aggregateBuilder.add(AnalysisEngineFactory.createEngineDescription(Overlap2Contains.class));