Return-Path: X-Original-To: apmail-ctakes-commits-archive@www.apache.org Delivered-To: apmail-ctakes-commits-archive@www.apache.org Received: from mail.apache.org (hermes.apache.org [140.211.11.3]) by minotaur.apache.org (Postfix) with SMTP id EB40810E9E for ; Fri, 5 Dec 2014 16:22:28 +0000 (UTC) Received: (qmail 4875 invoked by uid 500); 5 Dec 2014 16:22:23 -0000 Delivered-To: apmail-ctakes-commits-archive@ctakes.apache.org Received: (qmail 4842 invoked by uid 500); 5 Dec 2014 16:22:23 -0000 Mailing-List: contact commits-help@ctakes.apache.org; run by ezmlm Precedence: bulk List-Help: List-Unsubscribe: List-Post: List-Id: Reply-To: dev@ctakes.apache.org Delivered-To: mailing list commits@ctakes.apache.org Received: (qmail 4832 invoked by uid 99); 5 Dec 2014 16:22:23 -0000 Received: from hades.apache.org (HELO hades.apache.org) (140.211.11.105) by apache.org (qpsmtpd/0.29) with ESMTP; Fri, 05 Dec 2014 16:22:23 +0000 Received: from hades.apache.org (localhost [127.0.0.1]) by hades.apache.org (ASF Mail Server at hades.apache.org) with ESMTP id 43561AC0F61; Fri, 5 Dec 2014 16:22:22 +0000 (UTC) Content-Type: text/plain; charset="utf-8" MIME-Version: 1.0 Content-Transfer-Encoding: 7bit Subject: svn commit: r1643346 - /ctakes/trunk/ctakes-clinical-pipeline/desc/analysis_engine/AggregatePlaintextProcessor.xml Date: Fri, 05 Dec 2014 16:22:22 -0000 To: commits@ctakes.apache.org From: chenpei@apache.org X-Mailer: svnmailer-1.0.9 Message-Id: <20141205162222.43561AC0F61@hades.apache.org> Author: chenpei Date: Fri Dec 5 16:22:21 2014 New Revision: 1643346 URL: http://svn.apache.org/r1643346 Log: CTAKES-340 - AggregatePlaintextProcessor.xml has missing closing delegateAnalysisEngine tag. Modified: ctakes/trunk/ctakes-clinical-pipeline/desc/analysis_engine/AggregatePlaintextProcessor.xml Modified: ctakes/trunk/ctakes-clinical-pipeline/desc/analysis_engine/AggregatePlaintextProcessor.xml URL: http://svn.apache.org/viewvc/ctakes/trunk/ctakes-clinical-pipeline/desc/analysis_engine/AggregatePlaintextProcessor.xml?rev=1643346&r1=1643345&r2=1643346&view=diff ============================================================================== --- ctakes/trunk/ctakes-clinical-pipeline/desc/analysis_engine/AggregatePlaintextProcessor.xml (original) +++ ctakes/trunk/ctakes-clinical-pipeline/desc/analysis_engine/AggregatePlaintextProcessor.xml Fri Dec 5 16:22:21 2014 @@ -1,246 +1,282 @@ - + + org.apache.uima.java + false + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + - Licensed to the Apache Software Foundation (ASF) under one - or more contributor license agreements. See the NOTICE file - distributed with this work for additional information - regarding copyright ownership. The ASF licenses this file - to you under the Apache License, Version 2.0 (the - "License"); you may not use this file except in compliance - with the License. You may obtain a copy of the License at + + + + + + + + + + + + - http://www.apache.org/licenses/LICENSE-2.0 + + + + + + - Unless required by applicable law or agreed to in writing, - software distributed under the License is distributed on an - "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY - KIND, either express or implied. See the License for the - specific language governing permissions and limitations - under the License. + + + ---> - -org.apache.uima.java -false - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - + + + AggregatePlaintextProcessor + Runs the complete pipeline for annotating clinical + documents in plain text format. + Includes adjusting NP chunks to include NP NP and NP PP NP. + + + + + + SegmentID + + String + false + false + + SimpleSegmentAnnotator/SegmentID + + + + ChunkCreatorClass + String + false + true + + Chunker/ChunkCreatorClass + + + + + + ChunkCreatorClass + + org.apache.ctakes.chunker.ae.PhraseTypeChunkCreator + + + + + + + SimpleSegmentAnnotator + SentenceDetectorAnnotator + TokenizerAnnotator + LvgAnnotator + ContextDependentTokenizerAnnotator + POSTagger + + Chunker + AdjustNounPhraseToIncludeFollowingNP + AdjustNounPhraseToIncludeFollowingPPNP + LookupWindowAnnotator + DictionaryLookupAnnotator + DependencyParser + SemanticRoleLabeler + ConstituencyParser + + + + GenericCleartkAnalysisEngine + HistoryCleartkAnalysisEngine + PolarityCleartkAnalysisEngine + SubjectCleartkAnalysisEngine + UncertaintyCleartkAnalysisEngine - - - - - - -AggregatePlaintextProcessor -Runs the complete pipeline for annotating clinical documents in plain text format. -Includes adjusting NP chunks to include NP NP and NP PP NP. - - - - -SegmentID - -String -false -false - -SimpleSegmentAnnotator/SegmentID - - - -ChunkCreatorClass -String -false -true - -Chunker/ChunkCreatorClass - - - - - -ChunkCreatorClass - -org.apache.ctakes.chunker.ae.PhraseTypeChunkCreator - - - - - -SimpleSegmentAnnotator -SentenceDetectorAnnotator -TokenizerAnnotator -LvgAnnotator -ContextDependentTokenizerAnnotator -POSTagger - -Chunker -AdjustNounPhraseToIncludeFollowingNP -AdjustNounPhraseToIncludeFollowingPPNP -LookupWindowAnnotator -DictionaryLookupAnnotator -DependencyParser -SemanticRoleLabeler - ConstituencyParser - - - - GenericCleartkAnalysisEngine - HistoryCleartkAnalysisEngine - PolarityCleartkAnalysisEngine - SubjectCleartkAnalysisEngine - UncertaintyCleartkAnalysisEngine - -ExtractionPrepAnnotator - - - -Ordering -For subiterator -1.0 - -org.apache.ctakes.typesystem.type.textspan.Segment -org.apache.ctakes.typesystem.type.textspan.Sentence -org.apache.ctakes.typesystem.type.syntax.BaseToken - - -org.apache.ctakes.typesystem.type.textspan.Sentence -org.apache.ctakes.typesystem.type.textsem.IdentifiedAnnotation - - - - - - - -org.apache.ctakes.typesystem.type.syntax.NewlineToken -org.apache.ctakes.typesystem.type.textsem.IdentifiedAnnotation -org.apache.ctakes.typesystem.type.syntax.WordToken -org.apache.ctakes.typesystem.type.syntax.VP -org.apache.ctakes.typesystem.type.refsem.UmlsConcept -org.apache.ctakes.typesystem.type.syntax.UCP -org.apache.ctakes.typesystem.type.textsem.TimeAnnotation -org.apache.ctakes.typesystem.type.syntax.SymbolToken -org.apache.ctakes.typesystem.type.textspan.Sentence -org.apache.ctakes.typesystem.type.textspanSegment -org.apache.ctakes.typesystem.type.syntax.SBAR -org.apache.ctakes.typesystem.type.textsem.RomanNumeralAnnotation -org.apache.ctakes.typesystem.type.textsem.RangeAnnotation -org.apache.ctakes.typesystem.type.syntax.PunctuationToken -org.apache.ctakes.typesystem.type.Property -org.apache.ctakes.typesystem.type.Properties -org.apache.ctakes.typesystem.type.textsem.PersonTitleAnnotation -org.apache.ctakes.typesystem.type.syntax.PRT -org.apache.ctakes.typesystem.type.syntax.PP -org.apache.ctakes.typesystem.type.OntologyConcept -org.apache.ctakes.typesystem.type.syntax.NumToken -org.apache.ctakes.typesystem.type.syntax. -org.apache.ctakes.typesystem.type.textsem.MeasurementAnnotation -edu.mayo.bmi.uima.lookup.type.LookupWindowAnnotation -org.apache.ctakes.typesystem.type.syntax.Lemma -org.apache.ctakes.typesystem.type.syntax.LST -org.apache.ctakes.typesystem.type.syntax.INTJ -org.apache.ctakes.typesystem.type.textsem.FractionAnnotation -org.apache.ctakes.typesystem.type.structured.DocumentID -uima.tcas.DocumentAnnotation -org.apache.ctakes.typesystem.type.textsem.DateAnnotation -org.apache.ctakes.typesystem.type.CopySrcAnnotation -org.apache.ctakes.typesystem.type.CopyDestAnnotation -org.apache.ctakes.typesystem.type.ContractionToken -org.apache.ctakes.typesystem.type.textsem.ContextAnnotation -org.apache.ctakes.typesystem.type.syntax.Chunk -org.apache.ctakes.typesystem.type.syntax.CONJP -org.apache.ctakes.typesystem.type.syntax.BaseToken -uima.cas.AnnotationBase -uima.tcas.Annotation -org.apache.ctakes.typesystem.type.syntax.ADVP -org.apache.ctakes.typesystem.type.syntax.ADJP - - - - - -true -true -false - - - + ExtractionPrepAnnotator + + + + Ordering + For subiterator + 1.0 + + org.apache.ctakes.typesystem.type.textspan.Segment + org.apache.ctakes.typesystem.type.textspan.Sentence + org.apache.ctakes.typesystem.type.syntax.BaseToken + + + org.apache.ctakes.typesystem.type.textspan.Sentence + org.apache.ctakes.typesystem.type.textsem.IdentifiedAnnotation + + + + + + + + + org.apache.ctakes.typesystem.type.syntax.NewlineToken + + org.apache.ctakes.typesystem.type.textsem.IdentifiedAnnotation + + org.apache.ctakes.typesystem.type.syntax.WordToken + + org.apache.ctakes.typesystem.type.syntax.VP + + org.apache.ctakes.typesystem.type.refsem.UmlsConcept + + org.apache.ctakes.typesystem.type.syntax.UCP + + org.apache.ctakes.typesystem.type.textsem.TimeAnnotation + + org.apache.ctakes.typesystem.type.syntax.SymbolToken + + org.apache.ctakes.typesystem.type.textspan.Sentence + + org.apache.ctakes.typesystem.type.textspanSegment + + org.apache.ctakes.typesystem.type.syntax.SBAR + + org.apache.ctakes.typesystem.type.textsem.RomanNumeralAnnotation + + org.apache.ctakes.typesystem.type.textsem.RangeAnnotation + + org.apache.ctakes.typesystem.type.syntax.PunctuationToken + + org.apache.ctakes.typesystem.type.Property + + org.apache.ctakes.typesystem.type.Properties + + org.apache.ctakes.typesystem.type.textsem.PersonTitleAnnotation + + org.apache.ctakes.typesystem.type.syntax.PRT + + org.apache.ctakes.typesystem.type.syntax.PP + + org.apache.ctakes.typesystem.type.OntologyConcept + + org.apache.ctakes.typesystem.type.syntax.NumToken + + org.apache.ctakes.typesystem.type.syntax. + + org.apache.ctakes.typesystem.type.textsem.MeasurementAnnotation + + edu.mayo.bmi.uima.lookup.type.LookupWindowAnnotation + + org.apache.ctakes.typesystem.type.syntax.Lemma + + org.apache.ctakes.typesystem.type.syntax.LST + + org.apache.ctakes.typesystem.type.syntax.INTJ + + org.apache.ctakes.typesystem.type.textsem.FractionAnnotation + + org.apache.ctakes.typesystem.type.structured.DocumentID + + uima.tcas.DocumentAnnotation + org.apache.ctakes.typesystem.type.textsem.DateAnnotation + + org.apache.ctakes.typesystem.type.CopySrcAnnotation + + org.apache.ctakes.typesystem.type.CopyDestAnnotation + + org.apache.ctakes.typesystem.type.ContractionToken + + org.apache.ctakes.typesystem.type.textsem.ContextAnnotation + + org.apache.ctakes.typesystem.type.syntax.Chunk + + org.apache.ctakes.typesystem.type.syntax.CONJP + + org.apache.ctakes.typesystem.type.syntax.BaseToken + + uima.cas.AnnotationBase + uima.tcas.Annotation + org.apache.ctakes.typesystem.type.syntax.ADVP + + org.apache.ctakes.typesystem.type.syntax.ADJP + + + + + + + true + true + false + + +