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From chen...@apache.org
Subject svn commit: r1643346 - /ctakes/trunk/ctakes-clinical-pipeline/desc/analysis_engine/AggregatePlaintextProcessor.xml
Date Fri, 05 Dec 2014 16:22:22 GMT
Author: chenpei
Date: Fri Dec  5 16:22:21 2014
New Revision: 1643346

URL: http://svn.apache.org/r1643346
Log:
CTAKES-340 - AggregatePlaintextProcessor.xml has missing closing delegateAnalysisEngine tag.

Modified:
    ctakes/trunk/ctakes-clinical-pipeline/desc/analysis_engine/AggregatePlaintextProcessor.xml

Modified: ctakes/trunk/ctakes-clinical-pipeline/desc/analysis_engine/AggregatePlaintextProcessor.xml
URL: http://svn.apache.org/viewvc/ctakes/trunk/ctakes-clinical-pipeline/desc/analysis_engine/AggregatePlaintextProcessor.xml?rev=1643346&r1=1643345&r2=1643346&view=diff
==============================================================================
--- ctakes/trunk/ctakes-clinical-pipeline/desc/analysis_engine/AggregatePlaintextProcessor.xml
(original)
+++ ctakes/trunk/ctakes-clinical-pipeline/desc/analysis_engine/AggregatePlaintextProcessor.xml
Fri Dec  5 16:22:21 2014
@@ -1,246 +1,282 @@
 <?xml version="1.0" encoding="UTF-8"?>
-<!--
+<!-- Licensed to the Apache Software Foundation (ASF) under one or more contributor 
+	license agreements. See the NOTICE file distributed with this work for additional 
+	information regarding copyright ownership. The ASF licenses this file to 
+	you under the Apache License, Version 2.0 (the "License"); you may not use 
+	this file except in compliance with the License. You may obtain a copy of 
+	the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required 
+	by applicable law or agreed to in writing, software distributed under the 
+	License is distributed on an "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS 
+	OF ANY KIND, either express or implied. See the License for the specific 
+	language governing permissions and limitations under the License. -->
+<analysisEngineDescription xmlns="http://uima.apache.org/resourceSpecifier">
+	<frameworkImplementation>org.apache.uima.java</frameworkImplementation>
+	<primitive>false</primitive>
+	<delegateAnalysisEngineSpecifiers>
+		<delegateAnalysisEngine key="LookupWindowAnnotator">
+			<import location="LookupWindowAnnotator.xml" />
+		</delegateAnalysisEngine>
+		<delegateAnalysisEngine key="SimpleSegmentAnnotator">
+			<import location="SimpleSegmentAnnotator.xml" />
+		</delegateAnalysisEngine>
+		<delegateAnalysisEngine key="Chunker">
+			<import location="../../../ctakes-chunker/desc/Chunker.xml" />
+		</delegateAnalysisEngine>
+		<delegateAnalysisEngine key="ExtractionPrepAnnotator">
+			<import location="ExtractionPrepAnnotator.xml" />
+		</delegateAnalysisEngine>
+		<!-- <delegateAnalysisEngine key="NegationAnnotator"> <import location="../../../ctakes-ne-contexts/desc/NegationAnnotator.xml"/>

+			</delegateAnalysisEngine> -->
+		<delegateAnalysisEngine key="SentenceDetectorAnnotator">
+			<import
+				location="../../../ctakes-core/desc/analysis_engine/SentenceDetectorAnnotator.xml" />
+		</delegateAnalysisEngine>
+		<delegateAnalysisEngine key="TokenizerAnnotator">
+			<import
+				location="../../../ctakes-core/desc/analysis_engine/TokenizerAnnotator.xml" />
+		</delegateAnalysisEngine>
+		<delegateAnalysisEngine key="POSTagger">
+			<import location="../../../ctakes-pos-tagger/desc/POSTagger.xml" />
+		</delegateAnalysisEngine>
+		<!-- <delegateAnalysisEngine key="ClearPOSTagger"> <import location="../../../ctakes-pos-tagger/desc/ClearNLPPOSTagger.xml"/>

+			</delegateAnalysisEngine> -->
+		<!-- <delegateAnalysisEngine key="StatusAnnotator"> <import location="../../../ctakes-ne-contexts/desc/StatusAnnotator.xml"/>

+			</delegateAnalysisEngine> -->
+		<delegateAnalysisEngine key="AdjustNounPhraseToIncludeFollowingNP">
+			<import
+				location="../../../ctakes-chunker/desc/AdjustNounPhraseToIncludeFollowingNP.xml" />
+		</delegateAnalysisEngine>
+		<delegateAnalysisEngine key="AdjustNounPhraseToIncludeFollowingPPNP">
+			<import
+				location="../../../ctakes-chunker/desc/AdjustNounPhraseToIncludeFollowingPPNP.xml" />
+		</delegateAnalysisEngine>
+		<delegateAnalysisEngine key="LvgAnnotator">
+			<import location="../../../ctakes-lvg/desc/analysis_engine/LvgAnnotator.xml" />
+		</delegateAnalysisEngine>
+		<delegateAnalysisEngine key="ContextDependentTokenizerAnnotator">
+			<import
+				location="../../../ctakes-context-tokenizer/desc/analysis_engine/ContextDependentTokenizerAnnotator.xml"
/>
+		</delegateAnalysisEngine>
+		<delegateAnalysisEngine key="DictionaryLookupAnnotator">
+			<import
+				location="../../../ctakes-dictionary-lookup/desc/analysis_engine/DictionaryLookupAnnotator.xml"
/>
+		</delegateAnalysisEngine>
+		<!-- <delegateAnalysisEngine key="AssertionAnnotator"> <import location="../../../ctakes-assertion/desc/AssertionMiniPipelineAnalysisEngine.xml"/>

+			</delegateAnalysisEngine> -->
+		<delegateAnalysisEngine key="GenericCleartkAnalysisEngine">
+			<import
+				location="../../../ctakes-assertion/desc/analysis_engine/GenericCleartkAnalysisEngine.xml"
/>
+		</delegateAnalysisEngine>
 
-    Licensed to the Apache Software Foundation (ASF) under one
-    or more contributor license agreements.  See the NOTICE file
-    distributed with this work for additional information
-    regarding copyright ownership.  The ASF licenses this file
-    to you under the Apache License, Version 2.0 (the
-    "License"); you may not use this file except in compliance
-    with the License.  You may obtain a copy of the License at
+		<delegateAnalysisEngine key="HistoryCleartkAnalysisEngine">
+			<import
+				location="../../../ctakes-assertion/desc/analysis_engine/HistoryCleartkAnalysisEngine.xml"
/>
+		</delegateAnalysisEngine>
+		<delegateAnalysisEngine key="PolarityCleartkAnalysisEngine">
+			<import
+				location="../../../ctakes-assertion/desc/analysis_engine/PolarityCleartkAnalysisEngine.xml"
/>
+		</delegateAnalysisEngine>
+		<delegateAnalysisEngine key="SubjectCleartkAnalysisEngine">
+			<import
+				location="../../../ctakes-assertion/desc/analysis_engine/SubjectCleartkAnalysisEngine.xml"
/>
+		</delegateAnalysisEngine>
+		<delegateAnalysisEngine key="UncertaintyCleartkAnalysisEngine">
+			<import
+				location="../../../ctakes-assertion/desc/analysis_engine/UncertaintyCleartkAnalysisEngine.xml"
/>
+		</delegateAnalysisEngine>
 
-      http://www.apache.org/licenses/LICENSE-2.0
+		<delegateAnalysisEngine key="DependencyParser">
+			<import
+				location="../../../ctakes-dependency-parser/desc/analysis_engine/ClearNLPDependencyParserAE.xml"
/>
+		</delegateAnalysisEngine>
+		<delegateAnalysisEngine key="SemanticRoleLabeler">
+			<import
+				location="../../../ctakes-dependency-parser/desc/analysis_engine/ClearNLPSemanticRoleLabelerAE.xml"
/>
+		</delegateAnalysisEngine>
 
-    Unless required by applicable law or agreed to in writing,
-    software distributed under the License is distributed on an
-    "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
-    KIND, either express or implied.  See the License for the
-    specific language governing permissions and limitations
-    under the License.
+		<delegateAnalysisEngine key="ConstituencyParser">
+			<import
+				location="../../../ctakes-constituency-parser/desc/ConstituencyParserAnnotator.xml" />
+		</delegateAnalysisEngine>
 
--->
-<analysisEngineDescription xmlns="http://uima.apache.org/resourceSpecifier">
-<frameworkImplementation>org.apache.uima.java</frameworkImplementation>
-<primitive>false</primitive>
-<delegateAnalysisEngineSpecifiers>
-<delegateAnalysisEngine key="LookupWindowAnnotator">
-<import location="LookupWindowAnnotator.xml"/>
-</delegateAnalysisEngine>
-<delegateAnalysisEngine key="SimpleSegmentAnnotator">
-<import location="SimpleSegmentAnnotator.xml"/>
-</delegateAnalysisEngine>
-<delegateAnalysisEngine key="Chunker">
-<import location="../../../ctakes-chunker/desc/Chunker.xml"/>
-</delegateAnalysisEngine>
-<delegateAnalysisEngine key="ExtractionPrepAnnotator">
-<import location="ExtractionPrepAnnotator.xml"/>
-</delegateAnalysisEngine>
-<!-- 
-<delegateAnalysisEngine key="NegationAnnotator">
-<import location="../../../ctakes-ne-contexts/desc/NegationAnnotator.xml"/>
-</delegateAnalysisEngine>
- -->
-<delegateAnalysisEngine key="SentenceDetectorAnnotator">
-<import location="../../../ctakes-core/desc/analysis_engine/SentenceDetectorAnnotator.xml"/>
-</delegateAnalysisEngine>
-<delegateAnalysisEngine key="TokenizerAnnotator">
-<import location="../../../ctakes-core/desc/analysis_engine/TokenizerAnnotator.xml"/>
-</delegateAnalysisEngine>
-<delegateAnalysisEngine key="POSTagger">
-<import location="../../../ctakes-pos-tagger/desc/POSTagger.xml"/>
-</delegateAnalysisEngine>
-<!-- 
-<delegateAnalysisEngine key="ClearPOSTagger">
-<import location="../../../ctakes-pos-tagger/desc/ClearNLPPOSTagger.xml"/>
-</delegateAnalysisEngine>
- -->
- <!-- 
-<delegateAnalysisEngine key="StatusAnnotator">
-<import location="../../../ctakes-ne-contexts/desc/StatusAnnotator.xml"/>
-</delegateAnalysisEngine>
- -->
-<delegateAnalysisEngine key="AdjustNounPhraseToIncludeFollowingNP">
-<import location="../../../ctakes-chunker/desc/AdjustNounPhraseToIncludeFollowingNP.xml"/>
-</delegateAnalysisEngine>
-<delegateAnalysisEngine key="AdjustNounPhraseToIncludeFollowingPPNP">
-<import location="../../../ctakes-chunker/desc/AdjustNounPhraseToIncludeFollowingPPNP.xml"/>
-</delegateAnalysisEngine>
-<delegateAnalysisEngine key="LvgAnnotator">
-<import location="../../../ctakes-lvg/desc/analysis_engine/LvgAnnotator.xml"/>
-</delegateAnalysisEngine>
-<delegateAnalysisEngine key="ContextDependentTokenizerAnnotator">
-<import location="../../../ctakes-context-tokenizer/desc/analysis_engine/ContextDependentTokenizerAnnotator.xml"/>
-</delegateAnalysisEngine>
-<delegateAnalysisEngine key="DictionaryLookupAnnotator">
-<import location="../../../ctakes-dictionary-lookup/desc/analysis_engine/DictionaryLookupAnnotator.xml"/>
-<!--     
-    <delegateAnalysisEngine key="AssertionAnnotator">
-      <import location="../../../ctakes-assertion/desc/AssertionMiniPipelineAnalysisEngine.xml"/>
-    </delegateAnalysisEngine>
- -->
-     <delegateAnalysisEngine key="GenericCleartkAnalysisEngine">
-      <import location="../../../ctakes-assertion/desc/analysis_engine/GenericCleartkAnalysisEngine.xml"/>
-     </delegateAnalysisEngine>
-     
-     <delegateAnalysisEngine key="HistoryCleartkAnalysisEngine">
-      <import location="../../../ctakes-assertion/desc/analysis_engine/HistoryCleartkAnalysisEngine.xml"/>
-     </delegateAnalysisEngine>
-     <delegateAnalysisEngine key="PolarityCleartkAnalysisEngine">
-      <import location="../../../ctakes-assertion/desc/analysis_engine/PolarityCleartkAnalysisEngine.xml"/>
-     </delegateAnalysisEngine>
-     <delegateAnalysisEngine key="SubjectCleartkAnalysisEngine">
-      <import location="../../../ctakes-assertion/desc/analysis_engine/SubjectCleartkAnalysisEngine.xml"/>
-     </delegateAnalysisEngine>
-     <delegateAnalysisEngine key="UncertaintyCleartkAnalysisEngine">
-      <import location="../../../ctakes-assertion/desc/analysis_engine/UncertaintyCleartkAnalysisEngine.xml"/>
-     </delegateAnalysisEngine>
-     
-<delegateAnalysisEngine key="DependencyParser">
-<import location="../../../ctakes-dependency-parser/desc/analysis_engine/ClearNLPDependencyParserAE.xml"/>
-</delegateAnalysisEngine>
-<delegateAnalysisEngine key="SemanticRoleLabeler">
-<import location="../../../ctakes-dependency-parser/desc/analysis_engine/ClearNLPSemanticRoleLabelerAE.xml"/>
-</delegateAnalysisEngine>
+	</delegateAnalysisEngineSpecifiers>
+	<analysisEngineMetaData>
+		<name>AggregatePlaintextProcessor</name>
+		<description>Runs the complete pipeline for annotating clinical
+			documents in plain text format.
+			Includes adjusting NP chunks to include NP NP and NP PP NP.
+		</description>
+		<version></version>
+		<vendor></vendor>
+		<configurationParameters searchStrategy="language_fallback">
+			<configurationParameter>
+				<name>SegmentID</name>
+				<description></description>
+				<type>String</type>
+				<multiValued>false</multiValued>
+				<mandatory>false</mandatory>
+				<overrides>
+					<parameter>SimpleSegmentAnnotator/SegmentID</parameter>
+				</overrides>
+			</configurationParameter>
+			<configurationParameter>
+				<name>ChunkCreatorClass</name>
+				<type>String</type>
+				<multiValued>false</multiValued>
+				<mandatory>true</mandatory>
+				<overrides>
+					<parameter>Chunker/ChunkCreatorClass</parameter>
+				</overrides>
+			</configurationParameter>
+		</configurationParameters>
+		<configurationParameterSettings>
+			<nameValuePair>
+				<name>ChunkCreatorClass</name>
+				<value>
+					<string>org.apache.ctakes.chunker.ae.PhraseTypeChunkCreator
+					</string>
+				</value>
+			</nameValuePair>
+		</configurationParameterSettings>
+		<flowConstraints>
+			<fixedFlow>
+				<node>SimpleSegmentAnnotator</node>
+				<node>SentenceDetectorAnnotator</node>
+				<node>TokenizerAnnotator</node>
+				<node>LvgAnnotator</node>
+				<node>ContextDependentTokenizerAnnotator</node>
+				<node>POSTagger</node>
+				<!-- <node>ClearPOSTagger</node> -->
+				<node>Chunker</node>
+				<node>AdjustNounPhraseToIncludeFollowingNP</node>
+				<node>AdjustNounPhraseToIncludeFollowingPPNP</node>
+				<node>LookupWindowAnnotator</node>
+				<node>DictionaryLookupAnnotator</node>
+				<node>DependencyParser</node>
+				<node>SemanticRoleLabeler</node>
+				<node>ConstituencyParser</node>
+				<!-- <node>AssertionAnnotator</node> -->
+				<!-- <node>StatusAnnotator</node> -->
+				<!-- <node>NegationAnnotator</node> -->
+				<node>GenericCleartkAnalysisEngine</node>
+				<node>HistoryCleartkAnalysisEngine</node>
+				<node>PolarityCleartkAnalysisEngine</node>
+				<node>SubjectCleartkAnalysisEngine</node>
+				<node>UncertaintyCleartkAnalysisEngine</node>
 
-    <delegateAnalysisEngine key="ConstituencyParser">
-      <import location="../../../ctakes-constituency-parser/desc/ConstituencyParserAnnotator.xml"/>
-    </delegateAnalysisEngine>
-    
-</delegateAnalysisEngineSpecifiers>
-<analysisEngineMetaData>
-<name>AggregatePlaintextProcessor</name>
-<description>Runs the complete pipeline for annotating clinical documents in plain
text format.  
-Includes adjusting NP chunks to include NP NP and NP PP NP.</description>
-<version></version>
-<vendor></vendor>
-<configurationParameters searchStrategy="language_fallback">
-<configurationParameter>
-<name>SegmentID</name>
-<description></description>
-<type>String</type>
-<multiValued>false</multiValued>
-<mandatory>false</mandatory>
-<overrides>
-<parameter>SimpleSegmentAnnotator/SegmentID</parameter>
-</overrides>
-</configurationParameter>
-<configurationParameter>
-<name>ChunkCreatorClass</name>
-<type>String</type>
-<multiValued>false</multiValued>
-<mandatory>true</mandatory>
-<overrides>
-<parameter>Chunker/ChunkCreatorClass</parameter>
-</overrides>
-</configurationParameter>
-</configurationParameters>
-<configurationParameterSettings>
-<nameValuePair>
-<name>ChunkCreatorClass</name>
-<value>
-<string>org.apache.ctakes.chunker.ae.PhraseTypeChunkCreator</string>
-</value>
-</nameValuePair>
-</configurationParameterSettings>
-<flowConstraints>
-<fixedFlow>
-<node>SimpleSegmentAnnotator</node>
-<node>SentenceDetectorAnnotator</node>
-<node>TokenizerAnnotator</node>
-<node>LvgAnnotator</node>
-<node>ContextDependentTokenizerAnnotator</node>
-<node>POSTagger</node>
-<!-- <node>ClearPOSTagger</node>  -->
-<node>Chunker</node>
-<node>AdjustNounPhraseToIncludeFollowingNP</node>
-<node>AdjustNounPhraseToIncludeFollowingPPNP</node>
-<node>LookupWindowAnnotator</node>
-<node>DictionaryLookupAnnotator</node>
-<node>DependencyParser</node>
-<node>SemanticRoleLabeler</node>
-		<node>ConstituencyParser</node>
-        <!-- <node>AssertionAnnotator</node> -->
-        <!-- <node>StatusAnnotator</node> -->
-       	<!-- <node>NegationAnnotator</node> -->
-       	<node>GenericCleartkAnalysisEngine</node>
-		<node>HistoryCleartkAnalysisEngine</node>
-		<node>PolarityCleartkAnalysisEngine</node>
-		<node>SubjectCleartkAnalysisEngine</node>
-		<node>UncertaintyCleartkAnalysisEngine</node>
-		
-<node>ExtractionPrepAnnotator</node>
-</fixedFlow>
-</flowConstraints>
-<typePriorities>
-<name>Ordering</name>
-<description>For subiterator</description>
-<version>1.0</version>
-<priorityList>
-<type>org.apache.ctakes.typesystem.type.textspan.Segment</type>
-<type>org.apache.ctakes.typesystem.type.textspan.Sentence</type>
-<type>org.apache.ctakes.typesystem.type.syntax.BaseToken</type>
-</priorityList>
-<priorityList>
-<type>org.apache.ctakes.typesystem.type.textspan.Sentence</type>
-<type>org.apache.ctakes.typesystem.type.textsem.IdentifiedAnnotation</type>
-</priorityList>
-</typePriorities>
-<fsIndexCollection/>
-<capabilities>
-<capability>
-<inputs/>
-<outputs>
-<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.syntax.NewlineToken</type>
-<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.textsem.IdentifiedAnnotation</type>
-<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.syntax.WordToken</type>
-<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.syntax.VP</type>
-<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.refsem.UmlsConcept</type>
-<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.syntax.UCP</type>
-<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.textsem.TimeAnnotation</type>
-<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.syntax.SymbolToken</type>
-<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.textspan.Sentence</type>
-<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.textspanSegment</type>
-<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.syntax.SBAR</type>
-<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.textsem.RomanNumeralAnnotation</type>
-<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.textsem.RangeAnnotation</type>
-<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.syntax.PunctuationToken</type>
-<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.Property</type>
-<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.Properties</type>
-<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.textsem.PersonTitleAnnotation</type>
-<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.syntax.PRT</type>
-<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.syntax.PP</type>
-<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.OntologyConcept</type>
-<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.syntax.NumToken</type>
-<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.syntax.</type>
-<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.textsem.MeasurementAnnotation</type>
-<type allAnnotatorFeatures="true">edu.mayo.bmi.uima.lookup.type.LookupWindowAnnotation</type>
-<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.syntax.Lemma</type>
-<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.syntax.LST</type>
-<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.syntax.INTJ</type>
-<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.textsem.FractionAnnotation</type>
-<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.structured.DocumentID</type>
-<type allAnnotatorFeatures="true">uima.tcas.DocumentAnnotation</type>
-<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.textsem.DateAnnotation</type>
-<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.CopySrcAnnotation</type>
-<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.CopyDestAnnotation</type>
-<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.ContractionToken</type>
-<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.textsem.ContextAnnotation</type>
-<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.syntax.Chunk</type>
-<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.syntax.CONJP</type>
-<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.syntax.BaseToken</type>
-<type allAnnotatorFeatures="true">uima.cas.AnnotationBase</type>
-<type allAnnotatorFeatures="true">uima.tcas.Annotation</type>
-<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.syntax.ADVP</type>
-<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.syntax.ADJP</type>
-</outputs>
-<languagesSupported/>
-</capability>
-</capabilities>
-<operationalProperties>
-<modifiesCas>true</modifiesCas>
-<multipleDeploymentAllowed>true</multipleDeploymentAllowed>
-<outputsNewCASes>false</outputsNewCASes>
-</operationalProperties>
-</analysisEngineMetaData>
-<resourceManagerConfiguration/>
+				<node>ExtractionPrepAnnotator</node>
+			</fixedFlow>
+		</flowConstraints>
+		<typePriorities>
+			<name>Ordering</name>
+			<description>For subiterator</description>
+			<version>1.0</version>
+			<priorityList>
+				<type>org.apache.ctakes.typesystem.type.textspan.Segment</type>
+				<type>org.apache.ctakes.typesystem.type.textspan.Sentence</type>
+				<type>org.apache.ctakes.typesystem.type.syntax.BaseToken</type>
+			</priorityList>
+			<priorityList>
+				<type>org.apache.ctakes.typesystem.type.textspan.Sentence</type>
+				<type>org.apache.ctakes.typesystem.type.textsem.IdentifiedAnnotation
+				</type>
+			</priorityList>
+		</typePriorities>
+		<fsIndexCollection />
+		<capabilities>
+			<capability>
+				<inputs />
+				<outputs>
+					<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.syntax.NewlineToken
+					</type>
+					<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.textsem.IdentifiedAnnotation
+					</type>
+					<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.syntax.WordToken
+					</type>
+					<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.syntax.VP
+					</type>
+					<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.refsem.UmlsConcept
+					</type>
+					<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.syntax.UCP
+					</type>
+					<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.textsem.TimeAnnotation
+					</type>
+					<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.syntax.SymbolToken
+					</type>
+					<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.textspan.Sentence
+					</type>
+					<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.textspanSegment
+					</type>
+					<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.syntax.SBAR
+					</type>
+					<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.textsem.RomanNumeralAnnotation
+					</type>
+					<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.textsem.RangeAnnotation
+					</type>
+					<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.syntax.PunctuationToken
+					</type>
+					<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.Property
+					</type>
+					<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.Properties
+					</type>
+					<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.textsem.PersonTitleAnnotation
+					</type>
+					<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.syntax.PRT
+					</type>
+					<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.syntax.PP
+					</type>
+					<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.OntologyConcept
+					</type>
+					<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.syntax.NumToken
+					</type>
+					<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.syntax.
+					</type>
+					<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.textsem.MeasurementAnnotation
+					</type>
+					<type allAnnotatorFeatures="true">edu.mayo.bmi.uima.lookup.type.LookupWindowAnnotation
+					</type>
+					<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.syntax.Lemma
+					</type>
+					<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.syntax.LST
+					</type>
+					<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.syntax.INTJ
+					</type>
+					<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.textsem.FractionAnnotation
+					</type>
+					<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.structured.DocumentID
+					</type>
+					<type allAnnotatorFeatures="true">uima.tcas.DocumentAnnotation</type>
+					<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.textsem.DateAnnotation
+					</type>
+					<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.CopySrcAnnotation
+					</type>
+					<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.CopyDestAnnotation
+					</type>
+					<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.ContractionToken
+					</type>
+					<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.textsem.ContextAnnotation
+					</type>
+					<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.syntax.Chunk
+					</type>
+					<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.syntax.CONJP
+					</type>
+					<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.syntax.BaseToken
+					</type>
+					<type allAnnotatorFeatures="true">uima.cas.AnnotationBase</type>
+					<type allAnnotatorFeatures="true">uima.tcas.Annotation</type>
+					<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.syntax.ADVP
+					</type>
+					<type allAnnotatorFeatures="true">org.apache.ctakes.typesystem.type.syntax.ADJP
+					</type>
+				</outputs>
+				<languagesSupported />
+			</capability>
+		</capabilities>
+		<operationalProperties>
+			<modifiesCas>true</modifiesCas>
+			<multipleDeploymentAllowed>true</multipleDeploymentAllowed>
+			<outputsNewCASes>false</outputsNewCASes>
+		</operationalProperties>
+	</analysisEngineMetaData>
+	<resourceManagerConfiguration />
 </analysisEngineDescription>



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