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From vjapa...@apache.org
Subject svn commit: r1565040 - /ctakes/branches/ytex/ctakes-ytex/scripts/data/build.xml
Date Thu, 06 Feb 2014 02:04:12 GMT
Author: vjapache
Date: Thu Feb  6 02:04:12 2014
New Revision: 1565040

URL: http://svn.apache.org/r1565040
Log:
umls import

Modified:
    ctakes/branches/ytex/ctakes-ytex/scripts/data/build.xml

Modified: ctakes/branches/ytex/ctakes-ytex/scripts/data/build.xml
URL: http://svn.apache.org/viewvc/ctakes/branches/ytex/ctakes-ytex/scripts/data/build.xml?rev=1565040&r1=1565039&r2=1565040&view=diff
==============================================================================
--- ctakes/branches/ytex/ctakes-ytex/scripts/data/build.xml (original)
+++ ctakes/branches/ytex/ctakes-ytex/scripts/data/build.xml Thu Feb  6 02:04:12 2014
@@ -33,7 +33,7 @@ Database connection parameters are taken
 
 	<!-- by default umls in same database/catalog as ytex -->
 	<property name="sql.dir" value="./${db.type}" />
-	<property name="meta.tables" value="MRDOC,MRSAB,MRSTY,MRCONSO,MRREL" />
+	<property name="meta.tables" value="MRDOC,MRSTY,MRCONSO,MRREL" />
 	<!-- SU is in a different format -->
 	<property name="net.tables" value="SRDEF,SRFIL,SRFLD,SRSTR,SRSTRE1,SRSTRE2" />
 	<property name="sct.home" value="E:/temp/SnomedCT_RF2Release_INT_20110731/Snapshot/Terminology"
/>
@@ -77,6 +77,8 @@ Database connection parameters are taken
 	</target>
 
 	<target name="umls.check.mrconso" description="set mrconso.exists property if mrconso
table can be found">
+		<echo>umls.schema ${umls.schema}</echo>
+		<echo>umls.catalog ${umls.catalog}</echo>
 		<delete file="${java.io.tmpdir}/mrconso-check.txt" quiet="yes" />
 		<if>
 			<equals arg1="${db.type}" arg2="mysql" />
@@ -168,7 +170,7 @@ Database connection parameters are taken
 				<antcall target="jdbc.sqlcmd">
 					<param name="sqlcmd.dir" value="umls" />
 					<param name="db.name" value="${umls.catalog}" />
-					<param name="db.schema" value="${umls.prefix}" />
+					<param name="db.schema" value="${umls.schema}" />
 					<param name="sqlcmd.script" value="@{sqlcmd.script}" />
 				</antcall>
 			</sequential>
@@ -344,6 +346,9 @@ Database connection parameters are taken
 	</target>
 	<!-- uima script targets -->
 	<target name="jdbc.sqlcmd">
+		<echo>db.schema${db.schema}</echo>
+		<echo>umls.schema ${umls.schema}</echo>
+		<echo>umls.catalog ${umls.catalog}</echo>
 		<property name="sql.onerror" value="abort" />
 		<property name="sql.delimiter" value=";" />
 		<property name="sql.catalog" value="${db.name}" />



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