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From chen...@apache.org
Subject svn commit: r1538660 - in /ctakes/trunk: ctakes-core/src/main/java/org/apache/ctakes/core/nlp/tokenizer/TokenizerPTB.java ctakes-regression-test/testdata/expectedoutput/RegressionPipelineCPETest/edge_cases_plaintext_1.txt.xml
Date Mon, 04 Nov 2013 16:07:01 GMT
Author: chenpei
Date: Mon Nov  4 16:07:01 2013
New Revision: 1538660

URL: http://svn.apache.org/r1538660
Log:
CTAKES-254 - Add empty string check Apostrophe in contraction breaks TokenizerPTB
CTAKES-256 - Add a test doc that contains various edge cases for regression testing

Added:
    ctakes/trunk/ctakes-regression-test/testdata/expectedoutput/RegressionPipelineCPETest/edge_cases_plaintext_1.txt.xml   (with props)
Modified:
    ctakes/trunk/ctakes-core/src/main/java/org/apache/ctakes/core/nlp/tokenizer/TokenizerPTB.java

Modified: ctakes/trunk/ctakes-core/src/main/java/org/apache/ctakes/core/nlp/tokenizer/TokenizerPTB.java
URL: http://svn.apache.org/viewvc/ctakes/trunk/ctakes-core/src/main/java/org/apache/ctakes/core/nlp/tokenizer/TokenizerPTB.java?rev=1538660&r1=1538659&r2=1538660&view=diff
==============================================================================
--- ctakes/trunk/ctakes-core/src/main/java/org/apache/ctakes/core/nlp/tokenizer/TokenizerPTB.java (original)
+++ ctakes/trunk/ctakes-core/src/main/java/org/apache/ctakes/core/nlp/tokenizer/TokenizerPTB.java Mon Nov  4 16:07:01 2013
@@ -1142,8 +1142,16 @@ public class TokenizerPTB {
 	    }
 	}
 
-	private void setNumPosition(WordToken wta, String tokenText) {
-
+	private void setNumPosition(WordToken wta, String tokenText) {
+		if ( tokenText.isEmpty() ) {
+			// was getting ioobE from tokenText.charAt(..)
+			// Possibilities like this (empty, null) should always be checked
+			// - but I wonder that we get (want) empty tokens at all.
+			// I believe that working with zero-length words is a bug, 
+			// and this is not a fix it merely avoids a crash.
+			wta.setNumPosition( TokenizerAnnotator.TOKEN_NUM_POS_NONE );
+			return;
+		}
 	    if (isDigit(tokenText.charAt(0)))  {
 
 		wta.setNumPosition(TokenizerAnnotator.TOKEN_NUM_POS_FIRST);

Added: ctakes/trunk/ctakes-regression-test/testdata/expectedoutput/RegressionPipelineCPETest/edge_cases_plaintext_1.txt.xml
URL: http://svn.apache.org/viewvc/ctakes/trunk/ctakes-regression-test/testdata/expectedoutput/RegressionPipelineCPETest/edge_cases_plaintext_1.txt.xml?rev=1538660&view=auto
==============================================================================
--- ctakes/trunk/ctakes-regression-test/testdata/expectedoutput/RegressionPipelineCPETest/edge_cases_plaintext_1.txt.xml (added)
+++ ctakes/trunk/ctakes-regression-test/testdata/expectedoutput/RegressionPipelineCPETest/edge_cases_plaintext_1.txt.xml Mon Nov  4 16:07:01 2013
@@ -0,0 +1,630 @@
+<?xml version="1.0" encoding="UTF-8"?><CAS version="2">
+    <uima.cas.Sofa _indexed="0" _id="3" sofaNum="1" sofaID="_InitialView" mimeType="text" sofaString="patient complained that the n'tion didn't make sense.  This is a test of an edge case in contraction in the tokezier."/>
+    <org.apache.ctakes.typesystem.type.structured.DocumentID _indexed="1" _id="1" documentID="edge_cases_plaintext_1.txt"/>
+    <uima.tcas.DocumentAnnotation _indexed="1" _id="10" _ref_sofa="3" begin="0" end="117" language="x-unspecified"/>
+    <org.apache.ctakes.typesystem.type.textspan.Segment _indexed="1" _id="15" _ref_sofa="3" begin="0" end="117" id="SIMPLE_SEGMENT"/>
+    <org.apache.ctakes.typesystem.type.textspan.Sentence _indexed="1" _id="21" _ref_sofa="3" begin="0" end="53" sentenceNumber="0"/>
+    <org.apache.ctakes.typesystem.type.textspan.Sentence _indexed="1" _id="27" _ref_sofa="3" begin="55" end="117" sentenceNumber="1"/>
+    <org.apache.ctakes.typesystem.type.syntax.WordToken _indexed="1" _id="33" _ref_sofa="3" begin="0" end="7" tokenNumber="0" normalizedForm="patient" partOfSpeech="NN" _ref_lemmaEntries="365" capitalization="0" numPosition="0" canonicalForm="patient"/>
+    <org.apache.ctakes.typesystem.type.syntax.WordToken _indexed="1" _id="45" _ref_sofa="3" begin="8" end="18" tokenNumber="1" normalizedForm="complain" partOfSpeech="VBD" _ref_lemmaEntries="486" capitalization="0" numPosition="0" canonicalForm="complain"/>
+    <org.apache.ctakes.typesystem.type.syntax.WordToken _indexed="1" _id="57" _ref_sofa="3" begin="19" end="23" tokenNumber="2" normalizedForm="that" partOfSpeech="IN" _ref_lemmaEntries="625" capitalization="0" numPosition="0" canonicalForm="that"/>
+    <org.apache.ctakes.typesystem.type.syntax.WordToken _indexed="1" _id="69" _ref_sofa="3" begin="24" end="27" tokenNumber="3" normalizedForm="the" partOfSpeech="DT" capitalization="0" numPosition="0"/>
+    <org.apache.ctakes.typesystem.type.syntax.WordToken _indexed="1" _id="81" _ref_sofa="3" begin="28" end="28" tokenNumber="5" normalizedForm="" partOfSpeech="JJ" _ref_lemmaEntries="692" capitalization="0" numPosition="0" canonicalForm=""/>
+    <org.apache.ctakes.typesystem.type.syntax.WordToken _indexed="1" _id="101" _ref_sofa="3" begin="31" end="34" tokenNumber="6" normalizedForm="ion" partOfSpeech="NN" _ref_lemmaEntries="741" capitalization="0" numPosition="0" canonicalForm="ion"/>
+    <org.apache.ctakes.typesystem.type.syntax.WordToken _indexed="1" _id="113" _ref_sofa="3" begin="35" end="38" tokenNumber="7" normalizedForm="did" partOfSpeech="VBD" _ref_lemmaEntries="832" capitalization="0" numPosition="0" canonicalForm="did"/>
+    <org.apache.ctakes.typesystem.type.syntax.WordToken _indexed="1" _id="133" _ref_sofa="3" begin="42" end="46" tokenNumber="9" normalizedForm="make" partOfSpeech="VB" _ref_lemmaEntries="941" capitalization="0" numPosition="0" canonicalForm="make"/>
+    <org.apache.ctakes.typesystem.type.syntax.WordToken _indexed="1" _id="145" _ref_sofa="3" begin="47" end="52" tokenNumber="10" normalizedForm="sense" partOfSpeech="JJ" _ref_lemmaEntries="1050" capitalization="0" numPosition="0" canonicalForm="sense"/>
+    <org.apache.ctakes.typesystem.type.syntax.WordToken _indexed="1" _id="165" _ref_sofa="3" begin="55" end="59" tokenNumber="12" normalizedForm="thi" partOfSpeech="DT" _ref_lemmaEntries="1180" capitalization="1" numPosition="0" canonicalForm="thi"/>
+    <org.apache.ctakes.typesystem.type.syntax.WordToken _indexed="1" _id="177" _ref_sofa="3" begin="60" end="62" tokenNumber="13" normalizedForm="is" partOfSpeech="VBZ" _ref_lemmaEntries="1301" capitalization="0" numPosition="0" canonicalForm="is"/>
+    <org.apache.ctakes.typesystem.type.syntax.WordToken _indexed="1" _id="189" _ref_sofa="3" begin="63" end="64" tokenNumber="14" normalizedForm="a" partOfSpeech="DT" _ref_lemmaEntries="1377" capitalization="0" numPosition="0" canonicalForm="a"/>
+    <org.apache.ctakes.typesystem.type.syntax.WordToken _indexed="1" _id="201" _ref_sofa="3" begin="65" end="69" tokenNumber="15" normalizedForm="test" partOfSpeech="NN" _ref_lemmaEntries="1444" capitalization="0" numPosition="0" canonicalForm="test"/>
+    <org.apache.ctakes.typesystem.type.syntax.WordToken _indexed="1" _id="213" _ref_sofa="3" begin="70" end="72" tokenNumber="16" normalizedForm="of" partOfSpeech="IN" capitalization="0" numPosition="0"/>
+    <org.apache.ctakes.typesystem.type.syntax.WordToken _indexed="1" _id="225" _ref_sofa="3" begin="73" end="75" tokenNumber="17" normalizedForm="an" partOfSpeech="DT" _ref_lemmaEntries="1517" capitalization="0" numPosition="0" canonicalForm="an"/>
+    <org.apache.ctakes.typesystem.type.syntax.WordToken _indexed="1" _id="237" _ref_sofa="3" begin="76" end="80" tokenNumber="18" normalizedForm="edge" partOfSpeech="NN" _ref_lemmaEntries="1608" capitalization="0" numPosition="0" canonicalForm="edge"/>
+    <org.apache.ctakes.typesystem.type.syntax.WordToken _indexed="1" _id="249" _ref_sofa="3" begin="81" end="85" tokenNumber="19" normalizedForm="case" partOfSpeech="NN" _ref_lemmaEntries="1717" capitalization="0" numPosition="0" canonicalForm="case"/>
+    <org.apache.ctakes.typesystem.type.syntax.WordToken _indexed="1" _id="261" _ref_sofa="3" begin="86" end="88" tokenNumber="20" normalizedForm="in" partOfSpeech="IN" capitalization="0" numPosition="0"/>
+    <org.apache.ctakes.typesystem.type.syntax.WordToken _indexed="1" _id="273" _ref_sofa="3" begin="89" end="100" tokenNumber="21" normalizedForm="contraction" partOfSpeech="NN" _ref_lemmaEntries="1811" capitalization="0" numPosition="0" canonicalForm="contraction"/>
+    <org.apache.ctakes.typesystem.type.syntax.WordToken _indexed="1" _id="285" _ref_sofa="3" begin="101" end="103" tokenNumber="22" normalizedForm="in" partOfSpeech="IN" capitalization="0" numPosition="0"/>
+    <org.apache.ctakes.typesystem.type.syntax.WordToken _indexed="1" _id="297" _ref_sofa="3" begin="104" end="107" tokenNumber="23" normalizedForm="the" partOfSpeech="DT" capitalization="0" numPosition="0"/>
+    <org.apache.ctakes.typesystem.type.syntax.WordToken _indexed="1" _id="309" _ref_sofa="3" begin="108" end="116" tokenNumber="24" normalizedForm="tokezi" partOfSpeech="NN" _ref_lemmaEntries="1935" capitalization="0" numPosition="0" canonicalForm="tokezi"/>
+    <org.apache.ctakes.typesystem.type.syntax.ContractionToken _indexed="1" _id="93" _ref_sofa="3" begin="28" end="31" tokenNumber="4" normalizedForm="n't" partOfSpeech="RB"/>
+    <org.apache.ctakes.typesystem.type.syntax.ContractionToken _indexed="1" _id="125" _ref_sofa="3" begin="38" end="41" tokenNumber="8" normalizedForm="n't" partOfSpeech="RB"/>
+    <org.apache.ctakes.typesystem.type.syntax.PunctuationToken _indexed="1" _id="157" _ref_sofa="3" begin="52" end="53" tokenNumber="11" normalizedForm="." partOfSpeech="."/>
+    <org.apache.ctakes.typesystem.type.syntax.PunctuationToken _indexed="1" _id="321" _ref_sofa="3" begin="116" end="117" tokenNumber="25" normalizedForm="." partOfSpeech="."/>
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+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1926" key="tokeziered" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1923" key="tokezy" posTag="RB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1920" key="tokezy" posTag="JJ"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1917" key="tokezyer" posTag="RB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1914" key="tokezyer" posTag="JJ"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1911" key="tokezierer" posTag="RB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1908" key="tokezierer" posTag="JJ"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1905" key="tokeziers" posTag="NN"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1902" key="tokeziers" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1899" key="tokezie" posTag="RB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1896" key="tokezie" posTag="JJ"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1893" key="tokezi" posTag="RB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1890" key="tokezi" posTag="JJ"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1887" key="tokeziering" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1884" key="tokezierest" posTag="RB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1881" key="tokezierest" posTag="JJ"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1878" key="tokezieer" posTag="RB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1875" key="tokezieer" posTag="JJ"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1872" key="tokezier" posTag="NN"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1869" key="tokezier" posTag="RB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1866" key="tokezier" posTag="JJ"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1863" key="tokezier" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1860" key="tokezyest" posTag="RB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1857" key="tokezyest" posTag="JJ"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1854" key="tokeziest" posTag="RB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1851" key="tokeziest" posTag="JJ"/>
+    <uima.cas.EmptyFSList _id="1850"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1808" key="contractioned" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1805" key="contractionest" posTag="RB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1802" key="contractionest" posTag="JJ"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1799" key="contraction" posTag="NN"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1796" key="contraction" posTag="RB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1793" key="contraction" posTag="JJ"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1790" key="contraction" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1787" key="contractioner" posTag="RB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1784" key="contractioner" posTag="JJ"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1781" key="contractions" posTag="NN"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1778" key="contractions" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1775" key="contractia" posTag="NN"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1772" key="contractioning" posTag="VB"/>
+    <uima.cas.EmptyFSList _id="1771"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1714" key="caseer" posTag="RB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1711" key="caseer" posTag="JJ"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1708" key="caseed" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1705" key="case" posTag="NN"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1702" key="case" posTag="RB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1699" key="case" posTag="JJ"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1696" key="case" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1693" key="casest" posTag="RB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1690" key="casest" posTag="JJ"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1687" key="caseest" posTag="RB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1684" key="caseest" posTag="JJ"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1681" key="caser" posTag="RB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1678" key="caser" posTag="JJ"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1675" key="cases" posTag="NN"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1672" key="cases" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1669" key="cased" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1666" key="casing" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1663" key="caseing" posTag="VB"/>
+    <uima.cas.EmptyFSList _id="1662"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1605" key="edgest" posTag="RB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1602" key="edgest" posTag="JJ"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1599" key="edging" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1596" key="edger" posTag="RB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1593" key="edger" posTag="JJ"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1590" key="edgeer" posTag="RB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1587" key="edgeer" posTag="JJ"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1584" key="edgeing" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1581" key="edgeest" posTag="RB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1578" key="edgeest" posTag="JJ"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1575" key="edges" posTag="NN"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1572" key="edges" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1569" key="edged" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1566" key="edge" posTag="NN"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1563" key="edge" posTag="RB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1560" key="edge" posTag="JJ"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1557" key="edge" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1554" key="edgeed" posTag="VB"/>
+    <uima.cas.EmptyFSList _id="1553"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1514" key="anest" posTag="RB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1511" key="anest" posTag="JJ"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1508" key="ans" posTag="NN"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1505" key="ans" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1502" key="an" posTag="NN"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1499" key="an" posTag="RB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1496" key="an" posTag="JJ"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1493" key="an" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1490" key="aner" posTag="RB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1487" key="aner" posTag="JJ"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1484" key="aning" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1481" key="aned" posTag="VB"/>
+    <uima.cas.EmptyFSList _id="1480"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1441" key="tested" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1438" key="testing" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1435" key="testest" posTag="RB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1432" key="testest" posTag="JJ"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1429" key="test" posTag="NN"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1426" key="test" posTag="RB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1423" key="test" posTag="JJ"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1420" key="test" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1417" key="tests" posTag="NN"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1414" key="tests" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1411" key="tester" posTag="RB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1408" key="tester" posTag="JJ"/>
+    <uima.cas.EmptyFSList _id="1407"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1374" key="aest" posTag="RB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1371" key="aest" posTag="JJ"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1368" key="aed" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1365" key="a" posTag="NN"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1362" key="a" posTag="RB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1359" key="a" posTag="JJ"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1356" key="a" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1353" key="aer" posTag="RB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1350" key="aer" posTag="JJ"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1347" key="aing" posTag="VB"/>
+    <uima.cas.EmptyFSList _id="1346"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1298" key="iser" posTag="RB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1295" key="iser" posTag="JJ"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1292" key="ising" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1289" key="isest" posTag="RB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1286" key="isest" posTag="JJ"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1283" key="iss" posTag="NN"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1280" key="iss" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1277" key="is" posTag="NN"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1274" key="is" posTag="RB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1271" key="is" posTag="JJ"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1268" key="is" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1265" key="ides" posTag="NN"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1262" key="ises" posTag="NN"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1259" key="ises" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1256" key="ised" posTag="VB"/>
+    <uima.cas.EmptyFSList _id="1255"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1177" key="Thissing" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1174" key="Thides" posTag="NN"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1171" key="Thissed" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1168" key="Thissest" posTag="RB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1165" key="Thissest" posTag="JJ"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1162" key="Thiing" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1159" key="Thised" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1156" key="Thi" posTag="NN"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1153" key="Thi" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1150" key="This" posTag="NN"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1147" key="This" posTag="RB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1144" key="This" posTag="JJ"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1141" key="This" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1138" key="Thisser" posTag="RB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1135" key="Thisser" posTag="JJ"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1132" key="Thisest" posTag="RB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1129" key="Thisest" posTag="JJ"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1126" key="Thises" posTag="NN"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1123" key="Thises" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1120" key="Thising" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1117" key="Thiser" posTag="RB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1114" key="Thiser" posTag="JJ"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1111" key="Thied" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1108" key="Thiss" posTag="NN"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1105" key="Thiss" posTag="VB"/>
+    <uima.cas.EmptyFSList _id="1104"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1047" key="sensing" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1044" key="senser" posTag="RB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1041" key="senser" posTag="JJ"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1038" key="senses" posTag="NN"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1035" key="senses" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1032" key="senseest" posTag="RB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1029" key="senseest" posTag="JJ"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1026" key="sense" posTag="NN"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1023" key="sense" posTag="RB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1020" key="sense" posTag="JJ"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1017" key="sense" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1014" key="senseed" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1011" key="sensest" posTag="RB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1008" key="sensest" posTag="JJ"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1005" key="sensed" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="1002" key="senseing" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="999" key="senseer" posTag="RB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="996" key="senseer" posTag="JJ"/>
+    <uima.cas.EmptyFSList _id="995"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="938" key="makeed" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="935" key="makest" posTag="RB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="932" key="makest" posTag="JJ"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="929" key="make" posTag="NN"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="926" key="make" posTag="RB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="923" key="make" posTag="JJ"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="920" key="make" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="917" key="makeest" posTag="RB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="914" key="makeest" posTag="JJ"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="911" key="making" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="908" key="makeer" posTag="RB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="905" key="makeer" posTag="JJ"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="902" key="maker" posTag="RB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="899" key="maker" posTag="JJ"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="896" key="makes" posTag="NN"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="893" key="makes" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="890" key="maked" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="887" key="makeing" posTag="VB"/>
+    <uima.cas.EmptyFSList _id="886"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="829" key="didest" posTag="RB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="826" key="didest" posTag="JJ"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="823" key="diding" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="820" key="dided" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="817" key="dider" posTag="RB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="814" key="dider" posTag="JJ"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="811" key="did" posTag="NN"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="808" key="did" posTag="RB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="805" key="did" posTag="JJ"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="802" key="did" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="799" key="diddest" posTag="RB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="796" key="diddest" posTag="JJ"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="793" key="dids" posTag="NN"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="790" key="dids" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="787" key="didding" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="784" key="didded" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="781" key="didder" posTag="RB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="778" key="didder" posTag="JJ"/>
+    <uima.cas.EmptyFSList _id="777"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="738" key="ions" posTag="NN"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="735" key="ions" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="732" key="ioned" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="729" key="ioner" posTag="RB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="726" key="ioner" posTag="JJ"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="723" key="ioning" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="720" key="ionest" posTag="RB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="717" key="ionest" posTag="JJ"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="714" key="ion" posTag="NN"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="711" key="ion" posTag="RB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="708" key="ion" posTag="JJ"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="705" key="ion" posTag="VB"/>
+    <uima.cas.EmptyFSList _id="704"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="689" key="" posTag="NN"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="686" key="" posTag="RB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="683" key="" posTag="JJ"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="680" key="" posTag="VB"/>
+    <uima.cas.EmptyFSList _id="679"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="622" key="thatter" posTag="RB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="619" key="thatter" posTag="JJ"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="616" key="thatted" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="613" key="thatest" posTag="RB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="610" key="thatest" posTag="JJ"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="607" key="thatting" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="604" key="thattest" posTag="RB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="601" key="thattest" posTag="JJ"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="598" key="thated" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="595" key="thating" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="592" key="that" posTag="NN"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="589" key="that" posTag="RB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="586" key="that" posTag="JJ"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="583" key="that" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="580" key="thats" posTag="NN"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="577" key="thats" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="574" key="thater" posTag="RB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="571" key="thater" posTag="JJ"/>
+    <uima.cas.EmptyFSList _id="570"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="483" key="complains" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="480" key="complaineeding" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="477" key="complaineded" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="474" key="complain" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="471" key="complainedest" posTag="RB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="468" key="complainedest" posTag="JJ"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="465" key="complainedding" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="462" key="complaineding" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="459" key="complained" posTag="NN"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="456" key="complained" posTag="RB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="453" key="complained" posTag="JJ"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="450" key="complained" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="447" key="complainedder" posTag="RB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="444" key="complainedder" posTag="JJ"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="441" key="complaineds" posTag="NN"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="438" key="complaineds" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="435" key="complaineeds" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="432" key="complaineder" posTag="RB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="429" key="complaineder" posTag="JJ"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="426" key="complaineddest" posTag="RB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="423" key="complaineddest" posTag="JJ"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="420" key="complaine" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="417" key="complaines" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="414" key="complaining" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="411" key="complaineing" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="408" key="complainedded" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="405" key="complaineed" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="402" key="complaineeded" posTag="VB"/>
+    <uima.cas.EmptyFSList _id="401"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="362" key="patienter" posTag="RB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="359" key="patienter" posTag="JJ"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="356" key="patiented" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="353" key="patientest" posTag="RB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="350" key="patientest" posTag="JJ"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="347" key="patienting" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="344" key="patient" posTag="NN"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="341" key="patient" posTag="RB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="338" key="patient" posTag="JJ"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="335" key="patient" posTag="VB"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="332" key="patients" posTag="NN"/>
+    <org.apache.ctakes.typesystem.type.syntax.Lemma _id="329" key="patients" posTag="VB"/>
+</CAS>

Propchange: ctakes/trunk/ctakes-regression-test/testdata/expectedoutput/RegressionPipelineCPETest/edge_cases_plaintext_1.txt.xml
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    svn:eol-style = native



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